Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_C03
         (1250 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    66   1e-09
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    56   1e-06
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    54   8e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0...    34   6.7  
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    34   6.7  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 66.5 bits (155), Expect = 1e-09
 Identities = 34/63 (53%), Positives = 38/63 (60%)
 Frame = +2

Query: 539 SKRPXTXKRPGGWRKTIGSAPLTXITKINAQXPXGXTRQDYXDTXTCPLXPPXCALXXXP 718
           SK+  T       R +IGSAPLT ITKI+AQ   G TRQDY DT   PL  P CAL   P
Sbjct: 2   SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61

Query: 719 CRI 727
           CR+
Sbjct: 62  CRL 64



 Score = 38.3 bits (85), Expect = 0.41
 Identities = 16/27 (59%), Positives = 17/27 (62%)
 Frame = +1

Query: 808 RCXSYPPSWAVCXNPPXHPXRXXRYPV 888
           RC S+ PSWAVC NPP  P     YPV
Sbjct: 90  RCRSFAPSWAVCTNPPFSPTAAP-YPV 115


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 56.4 bits (130), Expect = 1e-06
 Identities = 28/47 (59%), Positives = 30/47 (63%)
 Frame = +2

Query: 578 RKTIGSAPLTXITKINAQXPXGXTRQDYXDTXTCPLXPPXCALXXXP 718
           R +IGSAPLT ITK +AQ   G TRQDY DT   PL  P CAL   P
Sbjct: 51  RFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 54.0 bits (124), Expect = 8e-06
 Identities = 28/52 (53%), Positives = 30/52 (57%)
 Frame = +2

Query: 563 RPGGWRKTIGSAPLTXITKINAQXPXGXTRQDYXDTXTCPLXPPXCALXXXP 718
           RP   R +IGSAPLT I K +AQ   G TRQDY D    PL  P CAL   P
Sbjct: 78  RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129


>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
           CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
           Citrobacter koseri ATCC BAA-895
          Length = 125

 Score = 34.3 bits (75), Expect = 6.7
 Identities = 15/27 (55%), Positives = 16/27 (59%)
 Frame = +1

Query: 808 RCXSYPPSWAVCXNPPXHPXRXXRYPV 888
           RC S+ PSWAV  NPP  P     YPV
Sbjct: 80  RCRSFAPSWAVSKNPPFSPTAAP-YPV 105


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 34.3 bits (75), Expect = 6.7
 Identities = 18/35 (51%), Positives = 19/35 (54%)
 Frame = +3

Query: 420 DSLRXXLRLPXXXXXHXKAXIXLSTEXXXNGGXNM 524
           DSLR  +RL      H KA I LSTE   N G NM
Sbjct: 25  DSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,878,344
Number of Sequences: 1657284
Number of extensions: 7029153
Number of successful extensions: 19823
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17592
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 126745205567
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)