Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_C01
(1142 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 58 1e-08
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 56 4e-08
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 54 3e-07
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 53 5e-07
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 7e-07
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 50 3e-06
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 50 5e-06
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 48 1e-05
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 48 1e-05
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 2e-05
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 45 1e-04
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 5e-04
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 42 0.001
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 42 0.001
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 42 0.001
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 40 0.003
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 39 0.007
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 38 0.015
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 38 0.015
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.020
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.020
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 38 0.020
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.020
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 37 0.026
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.026
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 37 0.035
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.035
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 37 0.035
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.046
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 36 0.061
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.061
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 36 0.080
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 36 0.080
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.14
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 34 0.19
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.19
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.25
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 33 0.32
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.43
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.57
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.57
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 32 0.75
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 32 0.75
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.99
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 31 2.3
SB_8091| Best HMM Match : C1_4 (HMM E-Value=1.3) 30 3.0
SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 29 9.2
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 29 9.2
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.2
SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.2
SB_6222| Best HMM Match : zf-C2H2 (HMM E-Value=7.6) 29 9.2
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 60.1 bits (139), Expect = 3e-09
Identities = 53/215 (24%), Positives = 81/215 (37%), Gaps = 4/215 (1%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLFTNGHYVLAGTNKSDDQSGIIRYVKRMVIHPLFSVGPYWLD 521
CGG++++P+W++TA HC + N + D S R+ I + + Y
Sbjct: 657 CGGTLVTPEWVITAAHCVVDKNPASIQVRLGAQDRTSPDPSVEMRISIRSIHNHPDYGSP 716
Query: 522 VEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYGTDEHGG 701
N D + +D + P G G+GT GG
Sbjct: 717 KRSSN--------DIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWGTLSSGG 768
Query: 702 VMRKDMHAMELSTQSDEVCSKLEQYN-SLDMICAKGRPPRFDSACNGDSGSGLVDGEGR- 875
+ ++ + ++ C + S DMICA G P C GDSG LV G
Sbjct: 769 SQPEALNQAVVPLRTRSECERSYPGKISADMICA-GNPEGGVDTCQGDSGGPLVCQHGNQ 827
Query: 876 --LVGVASWVENDAFECRNGNLVVFSRVSXARDWI 974
L GV SW AF + G V++ V + W+
Sbjct: 828 WFLTGVTSWGHGCAFAGKYG---VYAGVQQLKQWV 859
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 58.0 bits (134), Expect = 1e-08
Identities = 65/239 (27%), Positives = 97/239 (40%), Gaps = 22/239 (9%)
Frame = +3
Query: 333 GGTCGGSIISPKWILTAGHCTLFTNG--HYVLAGTNKSDDQSGIIRYVKRMVIHPLFSVG 506
G CGGS+++P W+LTA HC L + + V+ G G + + ++ ++ G
Sbjct: 55 GFICGGSLVAPGWVLTAAHCILSDDASKYKVVLGDVDRKKIEGSEQMIDVAMVIKHYAYG 114
Query: 507 ---PYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAG 677
P DV L+ + DF T+ + D ++ IG D G
Sbjct: 115 NPVPNANDVALLKLRDYPTKTDFV------------NTVCLPQYMD--HVEIGKDCFITG 160
Query: 678 YGTDEHGGVMRKDMHAMELSTQSDEVCS---------KLEQYN---SLDMICAKGRPPRF 821
+G + G + +L S+ CS +LE + M+CA
Sbjct: 161 WGRSYYPGPTANKLQQADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDAGKTG 220
Query: 822 DSACNGDSGSGLV----DGEGRLVGVASWVENDAFECRNGN-LVVFSRVSXARDWIRXV 983
+ CNGDSG V G+ L GV SW + EC + N VF+RVS R WI V
Sbjct: 221 KNGCNGDSGGPFVCRNTAGQWVLQGVVSWGDP---ECSSANHFSVFARVSVLRHWIDKV 276
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 56.4 bits (130), Expect = 4e-08
Identities = 54/202 (26%), Positives = 78/202 (38%), Gaps = 12/202 (5%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLFTNG----HYVLAGTNKSDDQSGIIRYVK--RMVIHPLFSV 503
CGGS+I P WILT+ HC N + G + G ++ ++ IHP V
Sbjct: 15 CGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEIIQGDQLYIHPGLVV 74
Query: 504 GPYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYG 683
G + D+++ + + + V NL G G+G
Sbjct: 75 GDL-ISPGDYDVALIKLK---------RPAVFHKRVHSVCLPSVTANLTTGTKCFVTGWG 124
Query: 684 TDEHGGVMRKDMHAMELSTQSDEVCSKLEQYNSL--DMICAKGRPPRFDSACNGDSGSGL 857
G ++ +E+ S EVC+ + YN D G P +C GDSG L
Sbjct: 125 KTAEGSPYSPVLNELEVDIVSKEVCNANDSYNGTINDRYFCAGFPQGGRDSCGGDSGGPL 184
Query: 858 V----DGEGRLVGVASWVENDA 911
V DG+ L GV SW E A
Sbjct: 185 VCSNADGQYVLRGVVSWGEGCA 206
Score = 34.3 bits (75), Expect = 0.19
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGGS+I +W++T+GHC
Sbjct: 276 CGGSLIDKQWVVTSGHC 292
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 54.4 bits (125), Expect = 2e-07
Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 10/228 (4%)
Frame = +3
Query: 339 TCGGSIISPKWILTAGHC---TLFTNGHYVLAGTNKSDDQSGIIRYVK--RMVIHPLFSV 503
TCGGS+IS +W++TA HC G+ V+ G +K + + + ++ +++ HP ++
Sbjct: 131 TCGGSLISDRWVVTAAHCIHRNKNPGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKYND 190
Query: 504 GPYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYG 683
V D L ++A F GK V D +P P G Y
Sbjct: 191 RRI---VNDIALLELATPVQFDSA---------GKVGTVCLTDQRP-AP-----GKRCYI 232
Query: 684 TDEHGGVMRKDMHAMELSTQSDEVCSKLEQYNSLDMICAK---GRPPRFDSA--CNGDSG 848
T G + +++H + E + ++S + K R R D+A CNGDSG
Sbjct: 233 T----GAIIRELHTFRRENRMGENNLRARDFSSFENKRRKFREKREARSDAAGGCNGDSG 288
Query: 849 SGLVDGEGRLVGVASWVENDAFECRNGNLVVFSRVSXARDWIRXVTXI 992
LV + + V C + VF+RV+ DWI+ +T +
Sbjct: 289 GPLVCEDNGSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWIKRMTVV 336
Score = 44.0 bits (99), Expect = 2e-04
Identities = 58/230 (25%), Positives = 90/230 (39%), Gaps = 14/230 (6%)
Frame = +3
Query: 339 TCGGSIISPKWILTAGHCTLFTN----------GHYVLAGTNKSDDQSGIIRYVK--RMV 482
TCGGS+IS +W++TA + N G+ V+ G +K + + + ++ +++
Sbjct: 454 TCGGSLISDRWVVTAAQ-GIHRNKNPGGRQNPGGYTVVVGAHKKRGSTSVQQSLRLSQII 512
Query: 483 IHPLFSVGPYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVD 662
HP ++ V D L ++A F GK V D +P P G
Sbjct: 513 EHPKYNDRRI---VNDIALLELATPVQFDSA---------GKVGTVCLTDQRP-AP-GKR 558
Query: 663 VGYAGYGTDEHGGVMRKD-MHAMELSTQSDEVCS-KLEQYNSLDMICAKGRPPRFDSACN 836
G+G D + L S E C K +S +CA CN
Sbjct: 559 CYITGWGAINGDTQQSPDILQQAMLPIASHENCRRKYGDVSSTAHLCAGEARSDAAGGCN 618
Query: 837 GDSGSGLVDGEGRLVGVASWVENDAFECRNGNLVVFSRVSXARDWIRXVT 986
GDSG LV + + V C + VF+RV+ DWI+ +T
Sbjct: 619 GDSGGPLVCEDNGSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWIKRMT 668
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 53.6 bits (123), Expect = 3e-07
Identities = 59/227 (25%), Positives = 86/227 (37%), Gaps = 16/227 (7%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC---TLFTNGHYVLAGTNKSDDQSGI--IRYVKRMVIHPLFSVG 506
CGGS++SP W++TA HC + T + V+ G + + G VKR++ HP ++
Sbjct: 93 CGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTYNSP 152
Query: 507 PYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYGT 686
D+ L V D + +G G+G
Sbjct: 153 QLSNDIALIELSS-----------------------PVPLSDRGHQVSVGSKCFITGWGK 189
Query: 687 DEHGGVMRKDMHAMELSTQSDEVCSKLEQYNSL------DMICAKGRPPRFDSACNGDSG 848
H G + + S + C K Q M+CA G P S C+GDSG
Sbjct: 190 IRHPGGSHHILQQAMMPPLSQDACKKKVQQAGFGIQITDSMVCA-GVPGSVVSGCHGDSG 248
Query: 849 SGLV----DGEGRLVGVASWVENDAFECRNGNL-VVFSRVSXARDWI 974
V DG L G SW + C + + VF RV+ R+WI
Sbjct: 249 GPYVCIQPDGRYVLQGDVSW---GSGRCDSSQMFTVFGRVAHFRNWI 292
Score = 36.3 bits (80), Expect = 0.046
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGGS+I P+W+LTA HC
Sbjct: 690 CGGSLIHPQWVLTATHC 706
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 52.8 bits (121), Expect = 5e-07
Identities = 56/218 (25%), Positives = 78/218 (35%), Gaps = 7/218 (3%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLFTNGHYVLAGTNKSDDQSGIIRYVKRMVIHPLFSVGPYWLD 521
CGGS+I+P+W+LTA HC + R +R I F + +
Sbjct: 106 CGGSLITPEWVLTAAHCV-------------EDFPHPSAHRIKERSAIQQEFRLTKLFKH 152
Query: 522 VEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYGTDEHGG 701
+DF++ + + D K V + +G G+G GG
Sbjct: 153 -KDFSMSHL--KNDVALLKLDNPIQPSDKVNTVCLPERNSRAQVGAQCFITGWGRLVGGG 209
Query: 702 VMRKDMHAMELSTQSDEVCSKLEQY----NSLDMICAKGRPPRFDSACNGDSGSGLVDGE 869
+ + L S C + Y MICA G C GDSG V E
Sbjct: 210 QPSEILQQAMLPVASHSACDRKNSYLVPVEEKSMICAGGMGM---GGCQGDSGGPFVCNE 266
Query: 870 GR---LVGVASWVENDAFECRNGNLVVFSRVSXARDWI 974
G L G SW + C + VF+RVS DWI
Sbjct: 267 GGRWVLRGAVSWGQP---MCGTDHYTVFARVSSFIDWI 301
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 52.4 bits (120), Expect = 7e-07
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Frame = +3
Query: 318 HAVLFGGTCGGSIISPKWILTAGHCTLFTN--GHYVLAGTNKSDDQSGI--IRYVKRMVI 485
H G CGGS+I+P+W+LTAGHC L + + V+ G D G I +V+R++
Sbjct: 80 HVTPHGFVCGGSLIAPQWVLTAGHCILTEDPEKYRVVLGDVDRDTTEGSEQIFHVRRIIK 139
Query: 486 HPLFSVG-PYWLDVEDFNLKQVA 551
HP +S PY DV L + A
Sbjct: 140 HPHYSRDVPYDNDVALLQLSRPA 162
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 50.4 bits (115), Expect = 3e-06
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 7/219 (3%)
Frame = +3
Query: 339 TCGGSIISPKWILTAGHCTLFTNGHYVLAGTNKSD--DQSGIIRYVKRMVIHPLFSVGPY 512
TCG ++I P W +TA HC + + + V+ G++ D + S V+R+ H FS+ Y
Sbjct: 352 TCGATLIRPGWAITAAHCVMRPDKYTVIVGSHSRDASEPSAQNIKVRRVYRHRGFSMANY 411
Query: 513 WLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYGTDE 692
D+ L++ A + K +P +G AG+G +
Sbjct: 412 VDDIALLELERSAV--------------INDKVSTACLPSGEPK--VGAICYIAGWGRLQ 455
Query: 693 HGGVMRKDMHAMELSTQSDEVCSKL--EQYNSLDMICAKGRPPRFDSACNGDSGSGLV-D 863
G + + ++ S E C + IC S+C GDSG LV +
Sbjct: 456 SLGDVALTLQQAKVPIVSKEDCKRAYGAIIRPYSHICVGFNTENAASSCQGDSGGPLVCE 515
Query: 864 GEGRLV--GVASWVENDAFECRNGNLVVFSRVSXARDWI 974
EGR V G S+ ++ C + V++RV+ WI
Sbjct: 516 EEGRWVLHGATSFGKS----CSPKHYSVYTRVNSYMKWI 550
Score = 39.1 bits (87), Expect = 0.007
Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 600 DGKTIKVATLDDQPNLPIGVDVGYAGYGTDEHGGVMRKDMHAMELSTQSDEVC-SKLEQY 776
+GK + A L +Q P G G+G+ G + + L S C +K
Sbjct: 186 EGK-VGTACLTNQQPTP-GKRCYITGWGSTIGTGNSPRILQQAMLPIASHNDCKNKYYGV 243
Query: 777 NSLDMICAKGRPPRFDSACNGDSGSGLV---DGEGRLVGVASWVENDAFECRNGNLVVFS 947
+S +CA CNGDSG LV +G L G S+ + C VF+
Sbjct: 244 SSTAHLCAGEARSGASGGCNGDSGGPLVCEDNGRWYLHGAVSYGK---LHCPTTYYTVFA 300
Query: 948 RVSXARDWIRXVT 986
RV+ DWI+ VT
Sbjct: 301 RVASYTDWIKQVT 313
Score = 34.3 bits (75), Expect = 0.19
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 339 TCGGSIISPKWILTAGHC 392
+CGG++IS +W++TA HC
Sbjct: 55 SCGGTLISDRWVVTASHC 72
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 49.6 bits (113), Expect = 5e-06
Identities = 56/224 (25%), Positives = 89/224 (39%), Gaps = 13/224 (5%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLFTNG-----HYV-LAGTNKSDDQSGIIRYVKRMVIHPLFSV 503
CGG+++ W++TA HC H + L G NK+ GI+ +R+ I ++
Sbjct: 240 CGGALVHEDWVVTASHCINDIRPEDYKTHIISLGGHNKT----GIMSVEQRIGIAKIYLH 295
Query: 504 GPYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYG 683
Y L +N D V D + P G + G+G
Sbjct: 296 ADYNLYPHQYNN-------DVALIRLAKPAIRTRYVQPVCLADGTVSFPPGTECWITGWG 348
Query: 684 TDEHGGVMRKDMHAMELSTQSDEVCSKLEQYN----SLDMICAKGRPPRFDSACNGDSGS 851
GG + + + S C+K Y S M+CA + P D+ C GDSG
Sbjct: 349 RLHSGGASPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCA--QVPGIDT-CQGDSGG 405
Query: 852 GLV---DGEGRLVGVASWVENDAFECRNGNLVVFSRVSXARDWI 974
LV + + LVGV SW A G ++++++ +DW+
Sbjct: 406 PLVCENNNKWTLVGVTSWGYGCAHPDYPG---IYAKLTELKDWV 446
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 48.4 bits (110), Expect = 1e-05
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCT---LFTNGHYVLAGT-NKSDDQSGIIRYVKRMVI 485
CGG++ISP W+LTAGHC L +G+ V+ GT N+S + I+ Y +R ++
Sbjct: 461 CGGTLISPDWVLTAGHCVHGQLDPSGYTVVVGTLNQSALSAPILEYQERSIL 512
Score = 35.9 bits (79), Expect = 0.061
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +3
Query: 702 VMRKDMHAMELSTQSDEVCS-KLEQYNSLDMICAKGRPPRFDSACNGDSGSGLVDGEGRL 878
+ R AM L S E C K +S +CA CNGDSG LV +
Sbjct: 904 ISRHPQQAM-LPIASHENCRRKYGDVSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGS 962
Query: 879 VGVASWVENDAFECRNGNLVVFSRVSXARDWIRXVT 986
+ V C + VF+RV+ DWI+ +T
Sbjct: 963 WFLHGAVSYGMKYCPTTHYTVFARVASYTDWIKRMT 998
Score = 33.9 bits (74), Expect = 0.25
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGG++IS +W++TA HC
Sbjct: 872 CGGALISDRWVVTASHC 888
Score = 30.3 bits (65), Expect = 3.0
Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 1/111 (0%)
Frame = +3
Query: 645 LPIG-VDVGYAGYGTDEHGGVMRKDMHAMELSTQSDEVCSKLEQYNSLDMICAKGRPPRF 821
LP G + VG Y T G + + + E S +C K + + CA
Sbjct: 616 LPTGEIAVGSKCYITGTQGTLQQAMLPIAEHS-----LCRKQYRVDRTAHPCAGEARVGA 670
Query: 822 DSACNGDSGSGLVDGEGRLVGVASWVENDAFECRNGNLVVFSRVSXARDWI 974
CNGDSG LV + + + V A C VF+RVS WI
Sbjct: 671 AGGCNGDSGGPLVCEQSGVWVLHGAVSYGARWCPTDYYTVFTRVSSYVAWI 721
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 48.0 bits (109), Expect = 1e-05
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 12/224 (5%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLFTNG--HYVLA-GTNKSDDQSGIIRY--VKRMVIHPLFSVG 506
CGGS+++P+WI+TA HC ++ Y +A G + + G + V+R+++HP ++
Sbjct: 135 CGGSVVAPEWIVTAAHCFAYSKDAKDYTIAVGEHDLNATDGYEQRPDVERIILHPKYA-- 192
Query: 507 PYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYGT 686
P+ D L ++A+ + + + V + +L +G+G
Sbjct: 193 PHNNHDYDVALIKLASPLQY-----------NDRVRPVCLPSLKEDLEENTQCYISGWGH 241
Query: 687 DEHGGVMRKDMHAMELSTQSDEVCSK----LEQYNSLDMICAKGRPPRFDSACNGDSGSG 854
+ G +H + S + C K L S M CA D AC GDSG
Sbjct: 242 LQEAGHGPWVLHQAAVPLVSRDTCQKAYNDLHYKVSSRMRCAGYGAGGID-ACQGDSGGP 300
Query: 855 LVDGEG---RLVGVASWVENDAFECRNGNLVVFSRVSXARDWIR 977
LV EG L+G SW A R G V++ + + W++
Sbjct: 301 LVCKEGDVWYLMGAISWGVGCA---RGGRYGVYADMMDLKYWVQ 341
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 48.0 bits (109), Expect = 1e-05
Identities = 54/214 (25%), Positives = 79/214 (36%), Gaps = 15/214 (7%)
Frame = +3
Query: 333 GGTCGGSIISPKWILTAGHCTLFTN----GHYVLA-GTNKSDDQSGIIRYV--KRMVIHP 491
G CGGSII P W++TAGHC + + G VL + S G +Y R+ +HP
Sbjct: 7 GHWCGGSIIDPHWVVTAGHCVVPWSPRAIGTRVLRFAEHDSSRMEGYEQYAIPDRIHLHP 66
Query: 492 LFSVGPYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGY 671
F +G +D + + D P G
Sbjct: 67 GFVIGGV----------SHPGYYDIALLHLAKPIQFSDRIQPICLPQDDTEFPAGKMCYL 116
Query: 672 AGYG-TDEHGGVMRKDMHAMELSTQSDEVCSKLEQYNSL---DMICAKGRPPRFDSACNG 839
G+G T GV + +++ + VC+ Y+ + +CA G C G
Sbjct: 117 TGWGETVLDSGVFSPTLKQLKVPLVNKSVCNSNNSYSGIIHEQFMCA-GYNQGGQDGCLG 175
Query: 840 DSGSGL----VDGEGRLVGVASWVENDAFECRNG 929
DSG L G+ L G+ SW E A + G
Sbjct: 176 DSGGPLSCQTESGDWVLTGLMSWGEKCALPDKYG 209
Score = 37.1 bits (82), Expect = 0.026
Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 6/152 (3%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLFTNG----HYVLAGTNKSDDQSGIIRYVK--RMVIHPLFSV 503
CGGS+I P WILT+ HC N + G + G ++ ++ IHP V
Sbjct: 275 CGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDVRKYEGFEEIIQGDKLYIHPGLVV 334
Query: 504 GPYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYG 683
G + D+++ + + T NL G G+G
Sbjct: 335 GDL-ISPGDYDVALIKLKRPAVFHKCVYSVCLPSVT---------ANLTTGTKCYVTGWG 384
Query: 684 TDEHGGVMRKDMHAMELSTQSDEVCSKLEQYN 779
G ++ +E+ S EVC+ + YN
Sbjct: 385 KTAEGSPYSLVLNEVEVDIVSKEVCNANDSYN 416
Score = 34.3 bits (75), Expect = 0.19
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGGS+I +W++T+GHC
Sbjct: 561 CGGSLIDKQWVVTSGHC 577
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 47.6 bits (108), Expect = 2e-05
Identities = 62/224 (27%), Positives = 85/224 (37%), Gaps = 10/224 (4%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLFTNGHYVLAGTN-KSDDQSGIIRYVKRMVIHPLFSVGPYWL 518
CGGS+I P W+LTA HC + L G + +S+ G + +K I P + Y
Sbjct: 57 CGGSLIDPGWVLTAAHCLVGEQPDSALLGAHYRSNKTVGTEKDIKVAQIIPHKN---YHS 113
Query: 519 DVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVG---YAGYGTD 689
+E N D V ++ +LP+ + G G+G+
Sbjct: 114 PIEMAN--------DIALLKLENPANLVNGVGTVCLANNNTHLPVD-EFGKCYITGWGSL 164
Query: 690 EHGGVMRKDMHAMELSTQSDEVCSKLEQYNSL--DMICAKGRPPRFDSACNGDSGSGLV- 860
GG + + S C + M+CA DS C GDSG LV
Sbjct: 165 SSGGAAPDRLMQASVPLVSKSRCDTGNYTGKIHESMLCAGLEQGGVDS-CQGDSGGPLVC 223
Query: 861 -DGEGR--LVGVASWVENDAFECRNGNLVVFSRVSXARDWIRXV 983
D GR L GV SW A G V++ V RDWI V
Sbjct: 224 EDTNGRWHLEGVTSWGYGCAAPRMYG---VYASVRYLRDWINGV 264
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 789 MICAKGRPPRFDSACNGDSGSGLVDGEGR---LVGVASWVENDAFECRNGNLVVFSRVSX 959
M+C G SACNGDSG LV EG L GVASWV +C N V++RVS
Sbjct: 109 MMCVGGAG---SSACNGDSGGPLVCEEGGKWVLRGVASWVATS--QCPVNNYSVYARVSS 163
Query: 960 ARDWIR 977
DWI+
Sbjct: 164 DVDWIQ 169
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 45.2 bits (102), Expect = 1e-04
Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 12/192 (6%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC---TLFTNGHYVLAGTNKSDDQSGIIRY-VKRMVIHPLFSV-G 506
CGG++I +W++TA HC + + + + G + + G + V + +H F G
Sbjct: 314 CGGTLIDTEWVVTAAHCVFQNIEPSNYKIKLGAHDRESSEGALTIPVTAIHMHTRFMTDG 373
Query: 507 PYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDD-QPNLPIGVDVGYAGYG 683
Y D+ L A G TI A L + G G+G
Sbjct: 374 SYGYDIAIMKLANPA---------------PIGHTISPACLPGLYDQVTSGTMCYVTGWG 418
Query: 684 TDEHGGVMRKDMHAMELSTQSDEVC----SKLEQYNSLDMICAKGRPPRFDSACNGDSGS 851
E+G + + + S E C +K + + + M+CA S C+GDSG
Sbjct: 419 MTEYGNAGARLLQQARIPVVSSEECERVNNKHRKVDKVTMLCAGNGGNSSISGCHGDSGG 478
Query: 852 GLV--DGEGRLV 881
V G+GR V
Sbjct: 479 PFVCMGGDGRWV 490
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 44.8 bits (101), Expect = 1e-04
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = +3
Query: 750 EVCS-KLEQY--NSLDMICAKGRPPRFDSACNGDSGSGLVDGEGR---LVGVASWVENDA 911
E C+ KL+++ + MICA G SAC+GDSG LV EG L G SW +
Sbjct: 467 ETCAIKLDKFAADKTTMICAGGSG---SSACSGDSGGPLVCHEGGTWVLRGAVSW--GTS 521
Query: 912 FECRNGNLVVFSRVSXARDWIRXVT 986
C V ++R+S DWI +T
Sbjct: 522 HSCPGRMFVAYARISSHIDWIERIT 546
Score = 37.1 bits (82), Expect = 0.026
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTL---FTNGHYVLAGTNK 437
CGGS++S W+LTA HC + T+ + V+ G +K
Sbjct: 340 CGGSLLSSTWVLTAAHCVIRSHNTSDYTVIVGAHK 374
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 43.2 bits (97), Expect = 4e-04
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCT--LFTNGHYVLAGTNKSDDQSGIIR--YVKRMVIHP 491
CGG+++ P+W++TA HC L T YV G + D ++G + ++R+ +HP
Sbjct: 275 CGGTLVHPRWVVTASHCVHKLTTGDLYVRMGAHWKDGKTGSEQDFRIQRIFMHP 328
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 42.7 bits (96), Expect = 5e-04
Identities = 65/239 (27%), Positives = 99/239 (41%), Gaps = 28/239 (11%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLFTNGHYV----------LAGTNKSDDQSGIIRYVKRMVIHP 491
CGGS+IS KW+LTA HC NG+ + L T ++ +R + + HP
Sbjct: 133 CGGSLISEKWVLTAAHCVTHRNGNILPRSRFQVQLGLYRTTLPNEPQVQLRNISEIRTHP 192
Query: 492 LFSVGPYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNL----PIGV 659
F + D+ L A ++ + I + DDQ +L G+
Sbjct: 193 QFDHVLFDADLALIKLDGEAIISEYV------------RPICLPETDDQASLISPSKFGM 240
Query: 660 DVGYAGYGTDEHGGVMRKDM-HAME---LSTQSDEVCSKL---EQYN-SLDMICAKGRPP 815
VG+ G G V K++ A++ + + VC++ E Y+ + +M CA G+
Sbjct: 241 AVGW-GKTVGRQGDVSVKNLADALKETCMPIVNSHVCNQAFQDEGYSVTPNMFCA-GQAS 298
Query: 816 RFDSACNGDSGSGLV--DGEGR---LVGVASWVENDAFECRNGNLV-VFSRVSXARDWI 974
C GDSG G V D + L GV SW + C N V+ RV+ WI
Sbjct: 299 GGKDICQGDSGGGFVLYDSAKQKWFLGGVVSW--GSSLGCGLPNKYGVYVRVTQFLGWI 355
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 41.9 bits (94), Expect = 0.001
Identities = 30/65 (46%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 789 MICAKGRPPRFDSACNGDSGSGLVDGEGR---LVGVASWVENDAFECRNGNLVVFSRVSX 959
MICA G SACNGDSG L E L GVASWV A C V++RVS
Sbjct: 458 MICAGGAG---SSACNGDSGGPLQCLENERWVLRGVASWV--TAETCPGNTFSVYARVSS 512
Query: 960 ARDWI 974
+WI
Sbjct: 513 YSNWI 517
Score = 34.3 bits (75), Expect = 0.19
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLFTN--GHYVLAGTNKSDDQSGIIRYVKRMVIHPLFSV 503
CG S+++P W LTA HC ++ Y L + G + + ++ H FS+
Sbjct: 266 CGASLLTPGWALTAAHCLTLSDDASDYTLVAGAHQRENDGQVFGISKIRKHKGFSM 321
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 41.5 bits (93), Expect = 0.001
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Frame = +3
Query: 612 IKVATLDDQPNLP-IGVDVGYAGYGTD-EHGGVMRKDMHAMELSTQSDEVCSKL--EQYN 779
+ VA L ++P +G G+G + G + + + S E C +
Sbjct: 50 VNVACLPSPGDVPPVGSKCWLTGWGRQVDSSGPLPDILQQARIPIASHEDCKRKYGSGIY 109
Query: 780 SLDMICAKGRPPRFDSACNGDSGSGLV---DGEGRLVGVASWVENDAFECRNGNLVVFSR 950
S +CA P AC GDSG LV +G+ L GV S+ A C + V+++
Sbjct: 110 SYTHLCAGEAKPNAAGACQGDSGGPLVCERNGQWTLYGVVSF---GAGNCEVTSYTVYTK 166
Query: 951 VSXARDWI 974
VS DWI
Sbjct: 167 VSNYLDWI 174
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 41.5 bits (93), Expect = 0.001
Identities = 47/217 (21%), Positives = 78/217 (35%), Gaps = 5/217 (2%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLFTNGHYVLAGTNKSDDQSGIIRYVKRMVIHPLFSVGPYWLD 521
CGGS++ WI+TA HC + + N ++ V + HP Y +
Sbjct: 66 CGGSLVPEDWIVTAAHCFDSNRLRWRVVAGNDMPSKAVNTTGVSAIWRHP-----QYKSN 120
Query: 522 VEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYGTDEHGG 701
+ +L+ +D KT+ + + + D AG+G GG
Sbjct: 121 IA--SLESGPCDYDVALVKLEKSVATTPKTVPICLVPRDTPRDLKRDCYVAGWGRRSFGG 178
Query: 702 VMRKDMHAMELSTQSDEVCSKLEQYNSLDMICAKGRPPRFDSA--CNGDSGSGLVDGEGR 875
+ +++ E+C+ Y + A PR C DSG L EG
Sbjct: 179 EQSLALREVQVHMVPRELCNSANSYGGVIHERALCAGPREGGCGPCQFDSGGPLACSEGG 238
Query: 876 L---VGVASWVENDAFECRNGNLVVFSRVSXARDWIR 977
L G+ S+ + G V+S + DW+R
Sbjct: 239 LWYMYGIVSYGVGCGVANKFG---VYSNMYELTDWVR 272
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 40.3 bits (90), Expect = 0.003
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLFTNG---HYVLAGTNK 437
CGGS++SP W+LTA HC + +N + V+ G +K
Sbjct: 56 CGGSLLSPLWLLTAAHCVIRSNNSADYTVIVGAHK 90
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 39.1 bits (87), Expect = 0.007
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLFTN--GHYVL-AGTNK--SDDQSGIIRYVKRMVIHPLFSVG 506
CG S++SP W LTA HC ++ Y L AG ++ +D + ++R V +++ H FS+G
Sbjct: 111 CGASLLSPGWALTAAHCVQRSSNPADYTLAAGAHRRVNDAHAQVLR-VSQVISHKEFSMG 169
Query: 507 PYWLDV 524
DV
Sbjct: 170 HLRNDV 175
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 37.9 bits (84), Expect = 0.015
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +3
Query: 339 TCGGSIISPKWILTAGHCTL---FTNGHYVLAG 428
+CGG++IS KW++TA HC + F + V+AG
Sbjct: 501 SCGGALISSKWVITAAHCVIEYPFPQVYEVIAG 533
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 37.9 bits (84), Expect = 0.015
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGGS+I+P+W+LTA HC
Sbjct: 63 CGGSLITPEWVLTAAHC 79
Score = 35.9 bits (79), Expect = 0.061
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Frame = +3
Query: 675 GYGTDEHGGVMRKDMHAMELSTQSDEVC----SKLEQYNSLDMICAKGRPPRFDSACNGD 842
G+G GG + + L D C ++L + + + MICA G+ R C GD
Sbjct: 94 GWGRTVGGGQGAEILQQAMLPVAYDNHCMQRNNQLMRVDPVSMICAGGQ--RAAGGCQGD 151
Query: 843 SGSGLVDGEGR---LVGVASWVENDAFECRNGNLVVFSRVSXA 962
SG V EG L G SW CR VF+R + A
Sbjct: 152 SGGPFVCNEGGKWVLRGAVSWGHE---MCRTDYYTVFAREAVA 191
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 37.5 bits (83), Expect = 0.020
Identities = 45/186 (24%), Positives = 66/186 (35%), Gaps = 9/186 (4%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC---TLFTNGHYVLAGTNKSDDQSGIIR--YVKRMVIHPLFSVG 506
CGGS+I+ W++TA HC +G+ V+ G + + + +K++ H FS+
Sbjct: 57 CGGSLIAKDWVVTAAHCVDRNPTPSGYTVVVGAHHRTGNTPVQNTFRLKQLFKHEQFSMR 116
Query: 507 PYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYGT 686
D+ L + D K V G G+G
Sbjct: 117 HLKNDIALLQLHEPVKASD--------------KVNTVCLPSSGSRAQAGARCYITGWGR 162
Query: 687 DEHGGVMRKDMHAMELSTQSDEVC----SKLEQYNSLDMICAKGRPPRFDSACNGDSGSG 854
GG + L D C +L +S MICA G+ C GDSG
Sbjct: 163 TVGGGSAAGILQQAMLPVAGDSDCQRTNGRLVPVDSRSMICAGGQG---KGGCQGDSGGP 219
Query: 855 LVDGEG 872
V EG
Sbjct: 220 FVCEEG 225
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 37.5 bits (83), Expect = 0.020
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +3
Query: 333 GGTCGGSIISPKWILTAGHCTLFT------NGHYVLAGTNKSDDQSGIIR--YVKRMVIH 488
G CGG+++SP+W++TA HC N + G +K G + V R+++H
Sbjct: 374 GHHCGGTLVSPQWVVTAAHCVDHVKDPKNYNELAITLGEHKRSASEGTEQRFSVARIIVH 433
Query: 489 PLF 497
P +
Sbjct: 434 PQY 436
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 37.5 bits (83), Expect = 0.020
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGGS+I+P+WILTA HC
Sbjct: 37 CGGSLIAPQWILTATHC 53
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 37.5 bits (83), Expect = 0.020
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 19/209 (9%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC-----TLFTNGHYVLAGTNKSDDQSGIIRYVK--RMVIHPLFS 500
CGG++I+ W++TA HC + + V G + + G + V+ +V+HPL +
Sbjct: 749 CGGALIARDWVVTAAHCFYYDGKIVPSDILVRLGEHDRTLEEGSEQNVRASNLVLHPLAN 808
Query: 501 VGPYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGY 680
DV LK + D ++ + +G+ AG+
Sbjct: 809 KNGLDFDVALIQLKG-GVKLTAYVRTVCLPQPTDAILVRPGS--------VGI---VAGW 856
Query: 681 GTDEHGGVMRKD------MHAMELSTQSDEVCSKLEQYNSLD--MICAKGRPPRFDSACN 836
G+ + G + + ++L S VC ++ N++ M CA G AC
Sbjct: 857 GSTQKGDASVRSGPPYPVLKQVQLPFVSHRVC-QVNHTNAITKRMRCA-GDVMGERDACK 914
Query: 837 GDSGSGLV----DGEGRLVGVASWVENDA 911
GDSGS +V DG VG++SW E A
Sbjct: 915 GDSGSPIVVKRTDGSWSAVGLSSWGEGCA 943
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 37.1 bits (82), Expect = 0.026
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGGS+I P+W+LTA HC
Sbjct: 286 CGGSLIHPEWVLTAAHC 302
Score = 33.5 bits (73), Expect = 0.32
Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Frame = +3
Query: 675 GYGTDEHGGVMRKDMHAMELSTQSDEVCSKLEQYNSLDMICAKGRPPRFDSACNGDSGSG 854
G+GT GG + + S C+ D + G AC GDSG
Sbjct: 80 GWGTLASGGNQPNKLMQASVPLVSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSGGP 139
Query: 855 LV---DGEGRLVGVASWVENDAFECRNGNLV-VFSRVSXARDWIRXV 983
LV +G + G SW + C + N V++ V + W++ +
Sbjct: 140 LVCEYNGRWHIEGATSW----GYGCASPNQYGVYAHVRYLKAWVQGI 182
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 37.1 bits (82), Expect = 0.026
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGGS+I P+W+LTA HC
Sbjct: 246 CGGSLIHPEWVLTAAHC 262
Score = 32.7 bits (71), Expect = 0.57
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 4/107 (3%)
Frame = +3
Query: 675 GYGTDEHGGVMRKDMHAMELSTQSDEVCSKLEQYNSLDMICAKGRPPRFDSACNGDSGSG 854
G+GT GG + + S C+ D + G AC GDSG
Sbjct: 424 GWGTLASGGNQPNKLMQASVPLVSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSGGP 483
Query: 855 LV---DGEGRLVGVASWVENDAFECRNGNLV-VFSRVSXARDWIRXV 983
LV G + G SW + C + N V++ V + W++ +
Sbjct: 484 LVCEYKGRWHIEGATSW----GYGCASPNQYGVYAHVRYLKAWVQGI 526
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 36.7 bits (81), Expect = 0.035
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 309 RFPHAVLFGGTCGGSIISPKWILTAGHCTLFTN 407
RF H+ CGG++I+ +W+LTA HC TN
Sbjct: 146 RFDHSGNQMQICGGALINREWVLTAAHCFYKTN 178
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 36.7 bits (81), Expect = 0.035
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGG++ISP W+LTA HC
Sbjct: 574 CGGNVISPWWVLTAAHC 590
Score = 36.3 bits (80), Expect = 0.046
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 825 SACNGDSGSGLV---DGEGRLVGVASWVENDAFECRNGNLVVFSRVSXARDWIRXVT 986
+ C+GDSG LV G L+G++SW + C VFS V A DWIR T
Sbjct: 727 AVCSGDSGGPLVCERGGRWFLMGLSSW----GWVCPQARPKVFSDVLAAMDWIREKT 779
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 36.7 bits (81), Expect = 0.035
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGGS+I P+WILTA HC
Sbjct: 80 CGGSLIHPQWILTATHC 96
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 36.3 bits (80), Expect = 0.046
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 825 SACNGDSGSGLV---DGEGRLVGVASWVENDAFECRNGNLVVFSRVSXARDWIRXVT 986
+ C+GDSG LV G L+G++SW + C VFS V A DWIR T
Sbjct: 478 AVCSGDSGGPLVCERGGRWFLMGLSSW----GWVCPQARPKVFSDVLAAMDWIREKT 530
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 35.9 bits (79), Expect = 0.061
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 678 YGTDEHGGVMRKDMHAMELSTQSDEVCSKLEQYNSLDMICAKGRPPRFDSACNGDSGSGL 857
+G GG + +E+ S CS+ M+CA GR +C GDSG +
Sbjct: 2 WGRTAEGGSSPTVLMQVEVPIVSASTCSRAYSRLHESMVCA-GRASGGIDSCQGDSGGPM 60
Query: 858 V---DGEGRLVGVASW 896
V +G+ L GV SW
Sbjct: 61 VCEYNGKFNLEGVVSW 76
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 35.9 bits (79), Expect = 0.061
Identities = 11/22 (50%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = +3
Query: 330 FGGT-CGGSIISPKWILTAGHC 392
+GG CGG+++ P+W++TA HC
Sbjct: 161 YGGQFCGGTLVHPQWVITAAHC 182
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 35.5 bits (78), Expect = 0.080
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC------TLFTNGHYVLAGTNK---SDDQSGIIRYVKRMVIHPL 494
C GS+I +WI+TAGHC + + VL G + S + VKR+++HP
Sbjct: 79 CAGSLIEARWIITAGHCFKDPRSSADPDKWKVLLGERRRHSSKRHFERAQQVKRIIVHPK 138
Query: 495 FS 500
F+
Sbjct: 139 FN 140
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 35.5 bits (78), Expect = 0.080
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 333 GGTCGGSIISPKWILTAGHC 392
G CGGSI++ +WI+TA HC
Sbjct: 1806 GHICGGSIVNSQWIVTAAHC 1825
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 35.1 bits (77), Expect = 0.11
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC-TLFTNGHYVLAGTNKSD----DQSGIIRYVKRMVIHPLFSVG 506
CGG++I+ W+LTA HC F+ SD D G +K + +HP ++
Sbjct: 1266 CGGALIAADWVLTAAHCFDRFSMPPEWTVQVGVSDMRRRDGKGQSLSIKAIFVHPQYNSS 1325
Query: 507 PYWLDVEDFNLKQVA 551
+ D+ L+Q A
Sbjct: 1326 SHEHDLAVLQLQQPA 1340
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLFTNG---HYVLAGTNKS--DDQSGIIRYVKRMVIHPLFS 500
CGGS++S W++TA HC ++ + ++ G + ++ + VK+++ HP ++
Sbjct: 502 CGGSLVSSTWVVTAAHCVARSSNPAQYQIIVGEHNRNVNEVTEETLNVKKVIAHPQYN 559
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 34.7 bits (76), Expect = 0.14
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = +3
Query: 321 AVLFGGT--CGGSIISPKWILTAGHC 392
A+L GT CGGS+++ W++TA HC
Sbjct: 70 ALLMNGTQFCGGSLVNENWVVTARHC 95
Score = 34.7 bits (76), Expect = 0.14
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 7/127 (5%)
Frame = +3
Query: 618 VATLDDQPNLPIGVDVGYAGYGTDEHGGVMRKDMHAMELSTQSDEVCSKLEQYNS---LD 788
+ L D P + G+G E G + + + E+C+++E YN +
Sbjct: 159 ICLLPDGFEFPWAKECYITGWGKTEFEGTKPQVIREATVKLVPPEICNQVESYNGSIHVR 218
Query: 789 MICAKGRPPRFDSACNGDSGSGL---VDGEGRLVGVASWVENDAFEC-RNGNLVVFSRVS 956
+CA G AC DSG L + L GV SW EC R V++ +
Sbjct: 219 ALCA-GFDQGGVDACQFDSGGPLSCSIGSRFYLTGVVSW----GHECARPKKYGVYANMM 273
Query: 957 XARDWIR 977
W+R
Sbjct: 274 RMTSWVR 280
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 34.3 bits (75), Expect = 0.19
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGGS+I +W+LTA HC
Sbjct: 68 CGGSLIDSEWVLTAAHC 84
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 34.3 bits (75), Expect = 0.19
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHCTLF 401
CGG++I+ W+LTA HC ++
Sbjct: 1192 CGGTLIAEDWVLTAAHCVVY 1211
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 33.9 bits (74), Expect = 0.25
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = +3
Query: 321 AVLFGGT---CGGSIISPKWILTAGHC 392
A+ GT CGGS+I +W++TA HC
Sbjct: 43 ALFLNGTHHRCGGSVIKSQWVVTAAHC 69
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 33.5 bits (73), Expect = 0.32
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 306 ERFP-HAVLFGGT-CGGSIISPKWILTAGHCTLFTNGHY 416
ER+P H V+ T C G+++SP+ +LTA HC L T Y
Sbjct: 154 ERYPFHTVVKLSTGCTGTLVSPRHVLTAAHC-LHTGRDY 191
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 33.5 bits (73), Expect = 0.32
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGGS+I W+LTA HC
Sbjct: 417 CGGSLIHSNWVLTAAHC 433
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 33.1 bits (72), Expect = 0.43
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGGS+I+ +W++TA HC
Sbjct: 460 CGGSLINREWVVTAAHC 476
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 32.7 bits (71), Expect = 0.57
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 312 FP-HAVLFGGTCGGSIISPKWILTAGHCTLFTNGHYVLAGTNKSDD 446
FP HA + C G+++SP+W++TA C ++ ++ K+DD
Sbjct: 41 FPWHAYIPELQCSGALVSPRWVVTAASCLKQSSSPFI--SRVKTDD 84
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 32.7 bits (71), Expect = 0.57
Identities = 48/228 (21%), Positives = 83/228 (36%), Gaps = 17/228 (7%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC-TLFTN----------GHYVLAGTNKSDDQSGIIRYVKRMVIH 488
CGG+++ +W++T HC +T+ G Y LA N+S +Q R VK + +H
Sbjct: 54 CGGALVHERWVVTGAHCFNPYTSEDPRDWNVTLGEYNLA-VNESFEQR---RGVKSITVH 109
Query: 489 PLFSVGPYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVG 668
+ W + + +D + + + +
Sbjct: 110 EHYK--SMWFE----GITDTPPMFDIALIELDRPVVFNFHVQPICIMRPNISFKWNTACF 163
Query: 669 YAGYGTDEHGGVMRKDMHAMELSTQSDEVCSKLEQYNSL---DMICAKGRPPRFDSACNG 839
+G+G G ++ + + S C+K YN +CA G +C
Sbjct: 164 ISGWGHTRWNGSQPNVLNFVMVPLVSHATCNKPLSYNGTIHETALCA-GYERGLKDSCEF 222
Query: 840 DSGSGLV---DGEGRLVGVASWVENDAFECRNGNLVVFSRVSXARDWI 974
DSG L G VG+ SW + A R V+SR++ W+
Sbjct: 223 DSGGPLACQKGGRYYAVGLVSWGDECA---RAHKFGVYSRMAKLTPWM 267
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 32.3 bits (70), Expect = 0.75
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 231 KRERLDAALVTTEFTKTQSDVKAVHERFPHAVLFGGTCGGSIISPKWILTAGHC 392
+R L+ +V+ + QS VH F CGG++I +W++TA HC
Sbjct: 36 QRSILEKRVVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHC 89
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 32.3 bits (70), Expect = 0.75
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 330 FGGTCGGSIISPKWILTAGHC 392
+G CGG++++ +W+LTA C
Sbjct: 280 YGPVCGGTLLTSEWVLTAARC 300
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 31.9 bits (69), Expect = 0.99
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 264 TEFTKTQSDVKAVHERFPHAVLF-GGTCGGSIISPKWILTAGHCTLFTNGHYVLAG 428
TE Q + +++ + A F C G ++ PK +LTA HC H + G
Sbjct: 97 TELKGAQRESRSIRRKLRRAQRFCPWGCTGVLVGPKHVLTAAHCVANEKPHNLKVG 152
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 30.7 bits (66), Expect = 2.3
Identities = 8/17 (47%), Positives = 15/17 (88%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGG+++ P++++TA HC
Sbjct: 50 CGGTLVHPRFVVTASHC 66
>SB_8091| Best HMM Match : C1_4 (HMM E-Value=1.3)
Length = 308
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 938 DQVSVAALKSVIFHPXRHPHQPPLAVHEPAATITIASRVE 819
D + ++K V HP HP QPP V EP + A V+
Sbjct: 62 DYTTQVSIKDVT-HPEAHPVQPPPLVEEPLPLVNRARTVD 100
>SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3066
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 723 RAYLYASRPHARQFRSQHIRRRLRLV 646
R Y+ R ARQ+R QHI++ LR V
Sbjct: 2977 RVYINTGRALARQYRYQHIQQLLRCV 3002
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 28.7 bits (61), Expect = 9.2
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 780 SLDMICAKGRPPRFDSACNGDSGSGLVDGEGRLVGVASWV-ENDAFECRNGNLV 938
S + C G+ R C+GD+ E LV ASW E F C NG +
Sbjct: 2170 SSEFACESGQCVRKSFVCDGDNDCHDGSDESSLV-CASWTCEPGHFSCNNGRCI 2222
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 273 TKTQSDVKAVHER-FPHAVLFGGTCGGSIISPKWILTAGHCTLFTNGHYVLA 425
T+ + ++AV F V C G++IS + +LT+ HC + + Y+++
Sbjct: 155 TRLEIPIRAVRRTPFSSIVHISTGCTGTLISTRHVLTSAHC-VHDSSEYIIS 205
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 231 FNTLLLASVXFKVLLHXKEFFCAIQVTRCVT 139
FN LL + +++L+ +EF CAI T CVT
Sbjct: 331 FNALL-QTAQMQLILNQEEFDCAICFTECVT 360
>SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 762 KLEQYNSLDMICAKGRPPRFDSACNGDSGSGLVDGEG 872
K + N+ +CA CNGDSG LV EG
Sbjct: 13 KYSKVNAKAHLCACSGQAASSGGCNGDSGGALVCEEG 49
>SB_6222| Best HMM Match : zf-C2H2 (HMM E-Value=7.6)
Length = 177
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 231 FNTLLLASVXFKVLLHXKEFFCAIQVTRCVT 139
FN LL + +++L+ +EF CAI T CVT
Sbjct: 17 FNALL-QTAQMQLILNQEEFDCAICFTECVT 46
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,630,265
Number of Sequences: 59808
Number of extensions: 606079
Number of successful extensions: 1522
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3521645721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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