Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_C01
(1142 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 49 5e-06
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 30 3.5
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 30 3.5
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 29 4.6
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 29 4.6
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 29 6.1
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 29 8.1
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 29 8.1
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 49.2 bits (112), Expect = 5e-06
Identities = 62/222 (27%), Positives = 89/222 (40%), Gaps = 11/222 (4%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC---TLFTNGHYVLAGTNKSDDQSGIIRYVKRMVIHPLFSVGPY 512
CGGS+I P ++LTA HC + V G ++S SG V + IHP +++G
Sbjct: 84 CGGSLIDPNFVLTAAHCFAKDRRPTSYSVRVGGHRSG--SGSPHRVTAVSIHPWYNIG-- 139
Query: 513 WLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYG-TD 689
+ DF + ++ T + L P + + V G+G T
Sbjct: 140 FPSSYDFAIMRI------------HPPVNTSTTARPICLPSLPAVENRLCV-VTGWGSTI 186
Query: 690 EHGGVMRKDMHAMELSTQSDEVCSKLEQY----NSLDMICAKGRPPRFDSACNGDSGSGL 857
E + + + + S CS L Y + M+CA + DS C GDSG L
Sbjct: 187 EGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGYSYGKIDS-CQGDSGGPL 245
Query: 858 V---DGEGRLVGVASWVENDAFECRNGNLVVFSRVSXARDWI 974
+ DG L GV SW A R G V+ V A WI
Sbjct: 246 MCARDGHWELTGVVSWGIGCA---RPGMPGVYGNVHSASTWI 284
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 297 AVHERFPHAVLFGGTCGGSIISPKWILTAGHCTLFTNGHYVLAGTNKSD 443
+V RFP CGG +I+P ++T+ HC + V A D
Sbjct: 33 SVITRFPDGTT--NVCGGVLIAPSIVITSAHCVFSGDDFAVTAKVTLGD 79
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 29.9 bits (64), Expect = 3.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 333 GGTCGGSIISPKWILTAGHCTL 398
G CG ++I W++TA HC L
Sbjct: 63 GILCGATVIDDFWLVTAAHCAL 84
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 339 TCGGSIISPKWILTAGHC 392
TC G+I+SP+ IL A HC
Sbjct: 192 TCTGTIVSPRHILIATHC 209
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Frame = +3
Query: 615 KVATLDDQPNLPIGV--DVGYAGYG----TDEHGGVMRKDMHAMELSTQSDEVCSKLEQY 776
K+A D Q LP+ V G G+G + +HGG +HA + Q C Y
Sbjct: 49 KMADWDKQGELPMDVLRKAGEMGFGAIYCSGDHGGSGLSRLHASVIFEQLSMGCVSTAAY 108
Query: 777 NSLDMICA 800
S+ +CA
Sbjct: 109 ISIHNMCA 116
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 29.1 bits (62), Expect = 6.1
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 606 KTIKVATLDDQPNLPIGVDVGYA--GYGTDEHGGVMRKDMHAMELSTQSDEVCSKLEQYN 779
K I A L P +P + GY GYG D V+ S ++ CS Y
Sbjct: 136 KDIFPACLPSAPKIPRIRETGYKLFGYGRDPSDSVLESGKLKSLYSFVAE--CSDDFPYG 193
Query: 780 SLDMICAKGRPPRFDSACNGDSGSGLV 860
+ A R +C+GDSGSG+V
Sbjct: 194 GVYCTSAVNR----GLSCDGDSGSGVV 216
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 29.1 bits (62), Expect = 6.1
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC 392
CGG++I+ K +LTA HC
Sbjct: 62 CGGTLITLKHVLTAAHC 78
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 28.7 bits (61), Expect = 8.1
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +3
Query: 306 ERFPHAVLFG----GTCGGSIISPKWILTAGHCTLFTNGH--YVLAGTNKSDDQSGIIRY 467
+ FP AV F GGSIISP I+TA H + T G + N S I R
Sbjct: 26 KNFPWAVSFTVDGVNRLGGSIISPYHIITAAHGFITTIGSRGNLCENKNWKKPNSSIYRS 85
Query: 468 VK 473
+K
Sbjct: 86 IK 87
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +3
Query: 342 CGGSIISPKWILTAGHC---TLFTNGHYVLAG--TNKSDDQSGIIRYVKRMVIHPLF 497
CG SI+ ++TA HC + + V+ G N D + I Y++R+ +PL+
Sbjct: 54 CGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLY 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,586,041
Number of Sequences: 27780
Number of extensions: 435242
Number of successful extensions: 1154
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3099034026
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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