Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B24
         (1208 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   2.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   3.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   3.4  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   3.4  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   3.4  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    25   3.4  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   5.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   7.7  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -1

Query: 1028 PPPPPPPXP 1002
            PPPPPPP P
Sbjct: 783  PPPPPPPPP 791


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect(2) = 2.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 1028 PPPPPPPXP 1002
            PP PPPP P
Sbjct: 582  PPAPPPPPP 590



 Score = 21.0 bits (42), Expect(2) = 2.2
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = -1

Query: 1067 PXGXGXXXXXXXXPPPPPPP 1008
            P G          P PPPPP
Sbjct: 570  PAGFPNLPNAQPPPAPPPPP 589


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 489 HYQPTPSHPQ 518
           +YQP+PSHPQ
Sbjct: 199 YYQPSPSHPQ 208


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 489 HYQPTPSHPQ 518
           +YQP+PSHPQ
Sbjct: 199 YYQPSPSHPQ 208


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 1003 GXGGGGGGGF 1032
            G GGGGGGGF
Sbjct: 949  GGGGGGGGGF 958


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 1003 GXGGGGGGGF 1032
            G GGGGGGGF
Sbjct: 947  GGGGGGGGGF 956


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 437 YGARQNY*RCRQKEDLLSLSANAVASTIRTVCW 535
           Y +   Y  C+  +DLL  SA  +    R VCW
Sbjct: 340 YPSTSPYQLCQMYKDLLQFSARHLKLGGRLVCW 372


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 5.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 247 HTTLPATITRNRRTTKYPSTS 309
           H T     TRNR TT+ P+TS
Sbjct: 293 HQTSSPIATRNRFTTRTPATS 313



 Score = 24.2 bits (50), Expect = 7.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 250 TTLPATITRNRRTTKYPSTS 309
           T  PAT T +R TT+ P+T+
Sbjct: 307 TRTPATSTEHRYTTRTPTTT 326


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 7.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 529 YCSYCGCDGVG 497
           YC  CGCD VG
Sbjct: 393 YCINCGCDPVG 403


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 872,602
Number of Sequences: 2352
Number of extensions: 17186
Number of successful extensions: 204
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 137338992
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)