Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B22
         (1182 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0225 - 21670861-21670887,21671340-21672021,21672041-21672852     31   1.8  
01_02_0098 - 11087875-11089110,11091744-11092022                       30   3.1  
12_02_1047 + 25666113-25666442,25666606-25666651,25667042-256671...    29   7.2  
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156...    29   7.2  

>09_06_0225 - 21670861-21670887,21671340-21672021,21672041-21672852
          Length = 506

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
 Frame = +1

Query: 301 KFETMTREMSAKEI--LNDFKENYI-KFRKLLDEDSKNDPENAPYFSKYKAKEILNNMYV 471
           + +TM    +AK++  L D ++ +I +F  +LD+    D     YF KYK  + L   Y+
Sbjct: 174 RIKTMADYWAAKKLHALQDLEKAHIQRFMNILDKIDIPDYVQQAYFQKYKVPDDLRLRYI 233

Query: 472 FLKTLKTEGSPVDD 513
               +K    P D+
Sbjct: 234 NHVEIKFRRMPDDE 247


>01_02_0098 - 11087875-11089110,11091744-11092022
          Length = 504

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +1

Query: 625 LLENALKPEIVVTLINVYNNIGILWSNRDDPEKAKASLVK 744
           L EN +K   +V+ I VYNN+  L+   D PEK   ++VK
Sbjct: 162 LYEN-MKAMNIVSDILVYNNLMCLYLKTDQPEKIPTTVVK 200


>12_02_1047 +
           25666113-25666442,25666606-25666651,25667042-25667130,
           25667291-25667493,25667807-25667949,25668286-25668332,
           25668794-25668870,25668952-25668981,25669068-25669163,
           25669489-25669591,25669959-25670041,25670204-25670326,
           25670465-25670576,25670791-25670898,25671006-25671593
          Length = 725

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 22/72 (30%), Positives = 32/72 (44%)
 Frame = +1

Query: 679 NNIGILWSNRDDPEKAKASLVKAKTLYEDFKCTLQMPLPIEVIINYVGETLIDDFMYLEK 858
           N   I + +RDDPE  + S    K L  D    L  P+ I   I Y+  T + D    EK
Sbjct: 313 NETMIYYPSRDDPEAVELSSSDIKCL--DPGVYLSSPV-INFYIQYMKRTKLHDDDCREK 369

Query: 859 SYTLTLYYLAQV 894
            Y    Y+ +++
Sbjct: 370 FYIFNTYFYSKL 381


>03_03_0266 - 16014740-16015045,16015566-16015601,16015623-16015643,
            16016331-16016591,16017504-16018985,16019834-16019989,
            16020154-16020277,16020399-16020615,16020877-16021774,
            16022947-16023291,16023371-16023565,16023751-16024453,
            16024866-16025467
          Length = 1781

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
 Frame = +1

Query: 559  IVEMDTEEPTASEKSLN-EAV----DLLLENALKPEIVVTLINVYNNIGILWSNRDDPEK 723
            +++  ++ P  S  S+N E+V    D++    L      +L++V N +   W+ ++DP  
Sbjct: 1210 LIQRGSKTPLHSSVSINVESVPLESDIVARRTLSEGQFPSLLDVSNALDAKWTGKNDPVP 1269

Query: 724  AKASLVKAKTLYEDF-KCTLQMPLPIEVIINYVGETLIDDFMYLEKSYTLTLY 879
            + A +       ED  +     P    V +N +G++  D   +L   + L LY
Sbjct: 1270 SSAIVPDCVASSEDSEEHVTDTPSYASVFLNKLGDSAEDQSNWLGMPF-LQLY 1321


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,244,117
Number of Sequences: 37544
Number of extensions: 375718
Number of successful extensions: 869
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3619930760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)