Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B19
         (1247 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   2.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   6.1  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    24   8.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +1

Query: 388 GGPXXKXPPPPGXGGFXXGXPXXXPP 465
           GGP    PPPP  G      P   PP
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPP 550



 Score = 24.6 bits (51), Expect = 6.1
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +1

Query: 376 GGGGGGPXXKXPPPPGXGGFXXGXP 450
           GG  GGP    PP P   GF    P
Sbjct: 600 GGPLGGPAGSRPPLPNLLGFGGAAP 624


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 2.0
 Identities = 27/113 (23%), Positives = 30/113 (26%), Gaps = 1/113 (0%)
 Frame = +1

Query: 409 PPPPGXGGFXXGXPXXXPPXXP-XPPGKXGGXXXXPPPXGXNXXPXKKGGXPKKKXXXKX 585
           P PP  GG     P    P  P  PPG   G        G    P    G  +     + 
Sbjct: 209 PQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGM-----QPGMQPRPPSAQGMQRPPMMGQP 263

Query: 586 PXXXXXPKKXPXXGFXPRAPPPXXXPXXXXPXKXGGXPXGXXKTPGXPPXNPP 744
           P         P  G  P+  P         P    G P       G  P  PP
Sbjct: 264 PPIR---PPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPP 313


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +1

Query: 373 GGGGGGGPXXKXPPPPGXGGFXXG 444
           GG  GGG      P PG GG   G
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGGG 232


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 24.2 bits (50), Expect = 8.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 373 GGGGGGGPXXKXPP 414
           GGGG GG   K PP
Sbjct: 397 GGGGDGGSDGKKPP 410


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.154    0.540 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,268
Number of Sequences: 2352
Number of extensions: 12836
Number of successful extensions: 272
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 142652703
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)