Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B17
         (1248 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   6.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   8.3  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 407 ELIIMAADAEPLEIVLHIPILCEDKNVPYVF 499
           +LI +   AE ++ +L   + C D+  PY+F
Sbjct: 93  KLIRIFLAAESIDDLLSNAVFCRDRVNPYLF 123


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +2

Query: 284 YPLADAALTAKILNLVQQATNYKQLRKGANEATKTLNRG 400
           YP ++      I NL Q   NYK        A  T ++G
Sbjct: 353 YPSSNLMPLNNIQNLSQSGINYKDTNDNNVSAVTTQHQG 391


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,154
Number of Sequences: 336
Number of extensions: 3500
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36582916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)