Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B16
         (1231 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DD8426 Cluster: PREDICTED: hypothetical protein;...    35   3.7  
UniRef50_A2YIY1 Cluster: Putative uncharacterized protein; n=2; ...    34   8.6  
UniRef50_Q95X23 Cluster: Putative uncharacterized protein; n=4; ...    34   8.6  

>UniRef50_UPI0000DD8426 Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 539

 Score = 35.1 bits (77), Expect = 3.7
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +1

Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGAXXXPPXXKXGIRSLKGG 474
           GGGGGGRG   +  G   GG         PP    G R++K G
Sbjct: 493 GGGGGGRGSSQKGGGDASGGSPGGALVRPPPRRGPGPRTIKAG 535


>UniRef50_A2YIY1 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 931

 Score = 33.9 bits (74), Expect = 8.6
 Identities = 16/25 (64%), Positives = 16/25 (64%)
 Frame = +1

Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
           GGGGGGRG   R  GRG GG G  G
Sbjct: 74  GGGGGGRGDGGR--GRGRGGGGGDG 96


>UniRef50_Q95X23 Cluster: Putative uncharacterized protein; n=4;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 250

 Score = 33.9 bits (74), Expect = 8.6
 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = +1

Query: 346 GGGGGGRGXXXR---V*GRGEGGXGXXGAXXXPPXXKXGIRSLKGG 474
           GGGGGGRG       V GRG GG G  G        +    S +GG
Sbjct: 28  GGGGGGRGSSGARGGVGGRGGGGRGGGGGGFRSGGARSSFSSFRGG 73


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,947,454
Number of Sequences: 1657284
Number of extensions: 5717400
Number of successful extensions: 55167
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41330
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 123910648254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)