Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_B16
(1231 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0633 - 4735298-4735485,4736083-4736114,4736203-4736297,473... 34 0.26
12_01_0840 - 7847239-7847531,7847576-7847675,7848312-7848388,784... 32 1.1
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 32 1.1
02_04_0400 - 22608519-22608844,22609044-22609122 31 1.4
07_03_1065 + 23711677-23711837,23711859-23712180,23713071-23713277 31 1.9
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 31 1.9
02_05_0149 + 26290236-26290880 31 2.5
02_04_0476 + 23248222-23248495,23249558-23249790 31 2.5
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 27 2.8
06_01_0194 + 1503350-1503554,1504399-1504490,1504835-1504935,150... 30 3.2
03_05_0292 + 22846273-22846377,22847161-22847823 30 3.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 4.3
07_03_0154 + 14509979-14512033 30 4.3
06_03_0790 - 24636805-24637770 30 4.3
01_07_0009 - 40397276-40397534,40397637-40398745,40398834-403989... 30 4.3
07_03_1136 + 24218601-24218734,24218769-24219906 29 5.7
06_03_1037 - 27058002-27058082,27058856-27059041,27060033-270601... 29 7.5
06_02_0175 - 12624608-12625297 29 7.5
09_06_0283 + 22024779-22026134,22026181-22026714 29 9.9
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174... 29 9.9
08_02_0332 + 15857514-15858113,15858226-15858268,15858474-15858538 29 9.9
03_05_0252 - 22403504-22404676 29 9.9
01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871 29 9.9
01_01_0570 - 4231100-4232560 29 9.9
>07_01_0633 -
4735298-4735485,4736083-4736114,4736203-4736297,
4736414-4736487,4736682-4736817,4736902-4736965,
4737101-4737166,4737265-4737446,4737824-4737948,
4738031-4738169,4738250-4738369,4738675-4738746,
4738900-4738935,4739633-4739749,4739821-4739953,
4740053-4740156,4740243-4740370,4740880-4741010,
4741561-4741757,4743906-4744583
Length = 938
Score = 33.9 bits (74), Expect = 0.26
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGGRG R GRG GG G G
Sbjct: 74 GGGGGGRGDGGR--GRGRGGGGGDG 96
>12_01_0840 -
7847239-7847531,7847576-7847675,7848312-7848388,
7848486-7848738
Length = 240
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGG+G G G+GG G G
Sbjct: 191 GGGGGGQGGGAHARGYGQGGGGGGG 215
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 403 PLPRALIPXXXLPAPPPXPPXXKTSXTSP 317
PLP A P P PPP PP + S + P
Sbjct: 65 PLPSATPPLAASPPPPPPPPPPRNSPSPP 93
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGAXXXPP 438
GGGGGG G G G GG G G PP
Sbjct: 66 GGGGGGGGGGGGGGGGGGGGGGGGGGGYYPP 96
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGG G GRG GG G G
Sbjct: 49 GGGGGGGGGGGGGGGRGGGGGGGGG 73
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGG G R G G GG G G
Sbjct: 53 GGGGGGGGGGGRGGGGGGGGGGGGG 77
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGGRG G G GG G G
Sbjct: 58 GGGGGGRGGGGGGGGGGGGGGGGGG 82
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGAXXXPPXXKXG 453
GGGGGG G G G GG G G P G
Sbjct: 65 GGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGG 100
>07_03_1065 + 23711677-23711837,23711859-23712180,23713071-23713277
Length = 229
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGG GGRG V G G GG G G
Sbjct: 64 GGGDGGRGRVVVVPGEGSGGNGGNG 88
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXG 411
GGGGGGRG GRG GG G
Sbjct: 100 GGGGGGRGGGGGGGGRGGGGRG 121
>02_05_0149 + 26290236-26290880
Length = 214
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGG G R G G GG G G
Sbjct: 132 GGGGGGGGGGGRNYGGGSGGIGGYG 156
>02_04_0476 + 23248222-23248495,23249558-23249790
Length = 168
Score = 30.7 bits (66), Expect = 2.5
Identities = 19/47 (40%), Positives = 20/47 (42%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGAXXXPPXXKXGIRSLKGGXXVI 486
GGGGGG G G G GG G G P R +GG VI
Sbjct: 25 GGGGGGHGNAVAA-GGGGGGAGEIGWEVRPGGMLVQKREGRGGEEVI 70
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 27.5 bits (58), Expect(2) = 2.8
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 349 GGGGGRGXXXRV*GRGEGGXGXXG 420
GGGG G R GRG GG G G
Sbjct: 122 GGGGYHGDGERGYGRGGGGGGGGG 145
Score = 21.4 bits (43), Expect(2) = 2.8
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 346 GGGGGGRG 369
GGGGGG+G
Sbjct: 78 GGGGGGQG 85
>06_01_0194 +
1503350-1503554,1504399-1504490,1504835-1504935,
1506186-1506276,1506616-1506674,1506764-1506884,
1506959-1507027,1507321-1507373,1507688-1507796,
1507895-1508065,1508148-1508306,1508561-1508650,
1508751-1508933,1509837-1510027,1510340-1510787
Length = 713
Score = 30.3 bits (65), Expect = 3.2
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEG 402
GGGGGGRG R GRG G
Sbjct: 693 GGGGGGRGGRGRGRGRGRG 711
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/27 (59%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*G--RGEGGXGXXG 420
GGGGGGRG R G RG GG G G
Sbjct: 56 GGGGGGRGDGARDGGGARGGGGRGARG 82
Score = 29.1 bits (62), Expect = 7.5
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 349 GGGGGRGXXXRV*GRGEGGXGXXGAXXXPPXXKXGIRSLKGG 474
GGGGGRG GRG+G GA G +GG
Sbjct: 48 GGGGGRGRGGGGGGRGDGARDGGGARGGGGRGARGGGGARGG 89
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 409 PXPLPRALIPXXXLPAPPPXPPXXKTSXTSP 317
P PLP L+P P PPP PP P
Sbjct: 591 PPPLPNCLVPSP--PPPPPPPPILPNRSVPP 619
Score = 29.5 bits (63), Expect = 5.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 409 PXPLPRALIPXXXLPAPPPXPP 344
P P P ++P +P PPP PP
Sbjct: 604 PPPPPPPILPNRSVPPPPPPPP 625
>07_03_0154 + 14509979-14512033
Length = 684
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 409 PXPLPRALIPXXXLPAPPPXPP 344
P PLP A P P PPP PP
Sbjct: 45 PLPLPAAAPPPPPPPPPPPPPP 66
>06_03_0790 - 24636805-24637770
Length = 321
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGG G GRG GG G G
Sbjct: 106 GGGGGGGGGGGGGGGRGGGGGGGGG 130
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGG G R G G GG G G
Sbjct: 110 GGGGGGGGGGGRGGGGGGGGGGGGG 134
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGGRG G G GG G G
Sbjct: 115 GGGGGGRGGGGGGGGGGGGGGGGGG 139
>01_07_0009 -
40397276-40397534,40397637-40398745,40398834-40398932,
40399043-40399272,40399534-40399585,40399679-40399865,
40399987-40400193,40400283-40400449,40400804-40401094,
40401166-40401636
Length = 1023
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGG R RV G GEG G G
Sbjct: 8 GGGGGARWKRARVAGMGEGKAGGGG 32
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.5 bits (63), Expect = 5.7
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGAXXXPPXXKXGIRSLKGG 474
GGGGGG G GR GG G G P G L GG
Sbjct: 174 GGGGGGGGP-----GRAPGGGGGGGGPGRAPGGGGGGGGLGGG 211
>06_03_1037 -
27058002-27058082,27058856-27059041,27060033-27060176,
27060284-27061183
Length = 436
Score = 29.1 bits (62), Expect = 7.5
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGAXXXPPXXKXGI 456
G GG GRG R GRG G G G K GI
Sbjct: 212 GRGGRGRGARGRERGRGRGRDGGRGRRSADMEEKHGI 248
>06_02_0175 - 12624608-12625297
Length = 229
Score = 29.1 bits (62), Expect = 7.5
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGAXXXPPXXKXGIRSLKGG 474
GGGGGG G G G GG G G G R KGG
Sbjct: 101 GGGGGGGGGGGGGGGGGGGGGGGGGGRRCWWGCGNGRRRHKGG 143
>09_06_0283 + 22024779-22026134,22026181-22026714
Length = 629
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGA 423
GGGGGG G G G GG G GA
Sbjct: 27 GGGGGGGGGGGGGGGGGGGGGGGGGA 52
>09_01_0112 +
1737438-1737777,1738441-1738511,1738974-1739052,
1741559-1741641,1741733-1741784,1742038-1742105,
1742279-1742345,1742426-1742505,1742576-1742640,
1742785-1742847,1743271-1743427,1743511-1743588,
1743677-1744219,1744321-1744497,1744534-1744788,
1745270-1745329,1745874-1745888,1746123-1746135,
1746819-1746934
Length = 793
Score = 28.7 bits (61), Expect = 9.9
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGG G RG GG G G
Sbjct: 37 GGGGGGSGSPPHRFSRGGGGGGGDG 61
>08_02_0332 + 15857514-15858113,15858226-15858268,15858474-15858538
Length = 235
Score = 28.7 bits (61), Expect = 9.9
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXG 411
GGGGGG G R GR GG G
Sbjct: 73 GGGGGGGGDGGREDGRDGGGEG 94
>03_05_0252 - 22403504-22404676
Length = 390
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGGR RV G G GG G G
Sbjct: 5 GGGGGGRA--GRVGGGGGGGAGGGG 27
>01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871
Length = 177
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 409 PXPLPRALIPXXXLPAPPPXPP 344
P P P P LP PPP PP
Sbjct: 135 PPPCPLPCPPPCPLPCPPPCPP 156
>01_01_0570 - 4231100-4232560
Length = 486
Score = 28.7 bits (61), Expect = 9.9
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGG G + G G GG G G
Sbjct: 91 GGGGGGLGGSGGLGGGGMGGSGGFG 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,076,702
Number of Sequences: 37544
Number of extensions: 252843
Number of successful extensions: 5758
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4449
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3782886900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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