Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B16
         (1231 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    27   1.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.9  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +1

Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
           GGG GGRG      GRG G  G  G
Sbjct: 66  GGGRGGRGGRGGGRGRGRGRGGRDG 90


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = +1

Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGA 423
           GGGGGG G      GR  GG G  GA
Sbjct: 560 GGGGGGGGG-----GRAGGGVGATGA 580


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +1

Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
           GGGGGGR    R   R   G G  G
Sbjct: 227 GGGGGGRDRDHRDRDREREGGGNGG 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,196
Number of Sequences: 2352
Number of extensions: 5202
Number of successful extensions: 44
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 140200221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)