Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_B16
(1231 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin pr... 33 0.80
AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 33 0.80
AE013599-3129|AAF46672.1| 237|Drosophila melanogaster CG4038-PA... 33 1.1
U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor ... 32 1.8
M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha rec... 32 1.8
M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha rec... 32 1.8
M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha rec... 32 1.8
BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p pro... 32 1.8
AE014296-1598|AAN11989.1| 585|Drosophila melanogaster CG10537-P... 32 1.8
AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-P... 32 1.8
AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-P... 32 1.8
X71975-1|CAA50795.1| 239|Drosophila melanogaster GCR 101 protein. 31 2.4
AY075437-1|AAL68252.1| 155|Drosophila melanogaster LP09837p pro... 31 3.2
AE014296-723|AAF47815.1| 155|Drosophila melanogaster CG10853-PA... 31 3.2
BT021407-1|AAX33555.1| 720|Drosophila melanogaster LD06749p pro... 30 5.6
AF162774-1|AAF68853.2| 720|Drosophila melanogaster Nopp140-like... 30 5.6
AE014296-3628|AAF51788.3| 720|Drosophila melanogaster CG7421-PA... 30 5.6
U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding pr... 30 7.4
M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protei... 30 7.4
L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding pr... 30 7.4
BT004875-1|AAO45231.1| 399|Drosophila melanogaster LD22761p pro... 30 7.4
AE014298-2351|AAN09389.1| 399|Drosophila melanogaster CG3606-PB... 30 7.4
AE014298-2350|AAF48578.2| 399|Drosophila melanogaster CG3606-PA... 30 7.4
AE014298-1193|AAF46385.1| 679|Drosophila melanogaster CG33181-P... 30 7.4
AY075501-1|AAO39496.1| 299|Drosophila melanogaster RE52135p pro... 29 9.8
>X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin
protein.
Length = 147
Score = 33.1 bits (72), Expect = 0.80
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 GGGGGGRGXXX-RV*GRGEGGXGXXGAXXXPPXXKXGIRSLKGGXXV 483
GGGGGGRG R G G GG G G G KGG V
Sbjct: 72 GGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRGGGAGGFKGGKTV 118
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGG G GRG GG G G
Sbjct: 17 GGGGGGGGGGGGFRGRGGGGGGGGG 41
Score = 30.3 bits (65), Expect = 5.6
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGAXXXPPXXKXGIRSLKGG 474
GGGGGG G R G G GG G G G R GG
Sbjct: 21 GGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGG 63
>AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA
protein.
Length = 344
Score = 33.1 bits (72), Expect = 0.80
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 GGGGGGRGXXX-RV*GRGEGGXGXXGAXXXPPXXKXGIRSLKGGXXV 483
GGGGGGRG R G G GG G G G KGG V
Sbjct: 65 GGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRGGGAGGFKGGKTV 111
Score = 31.9 bits (69), Expect = 1.8
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +1
Query: 334 FXXXGGGGGGRGXXXRV*GRGEGGXGXXG 420
F GGGGGG G GRG GG G G
Sbjct: 6 FSPRGGGGGGGGGGGGFRGRGGGGGGGGG 34
Score = 30.3 bits (65), Expect = 5.6
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGAXXXPPXXKXGIRSLKGG 474
GGGGGG G R G G GG G G G R GG
Sbjct: 14 GGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGG 56
>AE013599-3129|AAF46672.1| 237|Drosophila melanogaster CG4038-PA
protein.
Length = 237
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGG G R GRG GG G G
Sbjct: 173 GGGGGGGGFGGRGGGRGGGGRGGGG 197
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GG GGGRG R G G GG G G
Sbjct: 182 GGRGGGRGGGGRGGGGGRGGGGFRG 206
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGGRG GRG GG G
Sbjct: 20 GGGGGGRGFGGGGGGRGGGGGRGGG 44
>U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor
protein.
Length = 606
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +2
Query: 458 AHSKGGXGLSTXXGXNPGXXXXGXGPXKKXXRKXAGXGGKXKXGRPPE 601
AHSKGG +T G G G GP + G GG G PPE
Sbjct: 486 AHSKGGTLENTVNGGRGGPQSHGPGPG-QGGGPPGGGGGGGGGGGPPE 532
>M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 595
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +2
Query: 458 AHSKGGXGLSTXXGXNPGXXXXGXGPXKKXXRKXAGXGGKXKXGRPPE 601
AHSKGG +T G G G GP + G GG G PPE
Sbjct: 475 AHSKGGTLENTVNGGRGGPQSHGPGPG-QGGGPPGGGGGGGGGGGPPE 521
>M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 601
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +2
Query: 458 AHSKGGXGLSTXXGXNPGXXXXGXGPXKKXXRKXAGXGGKXKXGRPPE 601
AHSKGG +T G G G GP + G GG G PPE
Sbjct: 481 AHSKGGTLENTVNGGRGGPQSHGPGPG-QGGGPPGGGGGGGGGGGPPE 527
>M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 606
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +2
Query: 458 AHSKGGXGLSTXXGXNPGXXXXGXGPXKKXXRKXAGXGGKXKXGRPPE 601
AHSKGG +T G G G GP + G GG G PPE
Sbjct: 486 AHSKGGTLENTVNGGRGGPQSHGPGPG-QGGGPPGGGGGGGGGGGPPE 532
>BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p
protein.
Length = 331
Score = 31.9 bits (69), Expect = 1.8
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +1
Query: 334 FXXXGGGGGGRGXXXRV*GRGEGGXGXXG 420
F GGGGGG G GRG GG G G
Sbjct: 6 FSPRGGGGGGGGGGGGFRGRGGGGGGGGG 34
Score = 31.1 bits (67), Expect = 3.2
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGAXXXPPXXKXGIRSLKGGXXVIHXXRG 501
GGGGGG G R G G GG G G G R GG RG
Sbjct: 14 GGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGRGAFGGRG 65
Score = 29.5 bits (63), Expect = 9.8
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 GGGGGGRGXXX-RV*GRGEGGXGXXGAXXXPPXXKXGIRSLKGGXXV 483
GG GGGRG R G G GG G G G KGG V
Sbjct: 52 GGFGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRGGGAGGFKGGKTV 98
>AE014296-1598|AAN11989.1| 585|Drosophila melanogaster CG10537-PB,
isoform B protein.
Length = 585
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +2
Query: 458 AHSKGGXGLSTXXGXNPGXXXXGXGPXKKXXRKXAGXGGKXKXGRPPE 601
AHSKGG +T G G G GP + G GG G PPE
Sbjct: 465 AHSKGGTLENTVNGGRGGPQSHGPGPG-QGGGPPGGGGGGGGGGGPPE 511
>AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-PA,
isoform A protein.
Length = 606
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +2
Query: 458 AHSKGGXGLSTXXGXNPGXXXXGXGPXKKXXRKXAGXGGKXKXGRPPE 601
AHSKGG +T G G G GP + G GG G PPE
Sbjct: 486 AHSKGGTLENTVNGGRGGPQSHGPGPG-QGGGPPGGGGGGGGGGGPPE 532
>AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-PC,
isoform C protein.
Length = 606
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +2
Query: 458 AHSKGGXGLSTXXGXNPGXXXXGXGPXKKXXRKXAGXGGKXKXGRPPE 601
AHSKGG +T G G G GP + G GG G PPE
Sbjct: 486 AHSKGGTLENTVNGGRGGPQSHGPGPG-QGGGPPGGGGGGGGGGGPPE 532
>X71975-1|CAA50795.1| 239|Drosophila melanogaster GCR 101 protein.
Length = 239
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +1
Query: 334 FXXXGGGGGGRGXXXRV*GRGEGGXGXXG 420
F GG GGGRG R G G GG G G
Sbjct: 179 FGGRGGRGGGRGGGGRGGGGGRGGGGFRG 207
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXG 411
GGGGGGRG GRG GG G
Sbjct: 9 GGGGGGRGFGGGGGGRGFGGGG 30
Score = 30.3 bits (65), Expect = 5.6
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGG G R GRG GG G G
Sbjct: 213 GGGGGGGGGFNR--GRGGGGGGGGG 235
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGGRG GRG GG G
Sbjct: 18 GGGGGGRGFGGGGGGRGGGGGRGGG 42
>AY075437-1|AAL68252.1| 155|Drosophila melanogaster LP09837p
protein.
Length = 155
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGAXXXPP 438
GGGGGG G G GEGG G G P
Sbjct: 63 GGGGGGGGGAGGGSGSGEGGGGAIGGTCPRP 93
>AE014296-723|AAF47815.1| 155|Drosophila melanogaster CG10853-PA
protein.
Length = 155
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXGAXXXPP 438
GGGGGG G G GEGG G G P
Sbjct: 63 GGGGGGGGGAGGGSGSGEGGGGAIGGTCPRP 93
>BT021407-1|AAX33555.1| 720|Drosophila melanogaster LD06749p
protein.
Length = 720
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
G GGGGRG GRG GG G G
Sbjct: 646 GRGGGGRGGGGGFGGRGGGGRGGGG 670
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
G GGGGRG GRG GG G G
Sbjct: 660 GRGGGGRGGGGGFGGRGGGGRGGGG 684
>AF162774-1|AAF68853.2| 720|Drosophila melanogaster Nopp140-like
nucleolar protein protein.
Length = 720
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
G GGGGRG GRG GG G G
Sbjct: 646 GRGGGGRGGGGGFGGRGGGGRGGGG 670
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
G GGGGRG GRG GG G G
Sbjct: 660 GRGGGGRGGGGGFGGRGGGGRGGGG 684
>AE014296-3628|AAF51788.3| 720|Drosophila melanogaster CG7421-PA,
isoform A protein.
Length = 720
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
G GGGGRG GRG GG G G
Sbjct: 646 GRGGGGRGGGGGFGGRGGGGRGGGG 670
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
G GGGGRG GRG GG G G
Sbjct: 660 GRGGGGRGGGGGFGGRGGGGRGGGG 684
>U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 29.9 bits (64), Expect = 7.4
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGGRG G G GG G G
Sbjct: 216 GGGGGGRGGFGGRRGGGGGGGGGGG 240
>M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 29.9 bits (64), Expect = 7.4
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGGRG G G GG G G
Sbjct: 178 GGGGGGRGGFGGRRGGGGGGGGGGG 202
>L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 29.9 bits (64), Expect = 7.4
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGGRG G G GG G G
Sbjct: 216 GGGGGGRGGFGGRRGGGGGGGGGGG 240
>BT004875-1|AAO45231.1| 399|Drosophila melanogaster LD22761p
protein.
Length = 399
Score = 29.9 bits (64), Expect = 7.4
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGGRG G G GG G G
Sbjct: 217 GGGGGGRGGFGGRRGGGGGGGGGGG 241
>AE014298-2351|AAN09389.1| 399|Drosophila melanogaster CG3606-PB,
isoform B protein.
Length = 399
Score = 29.9 bits (64), Expect = 7.4
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGGRG G G GG G G
Sbjct: 217 GGGGGGRGGFGGRRGGGGGGGGGGG 241
>AE014298-2350|AAF48578.2| 399|Drosophila melanogaster CG3606-PA,
isoform A protein.
Length = 399
Score = 29.9 bits (64), Expect = 7.4
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGGRG G G GG G G
Sbjct: 217 GGGGGGRGGFGGRRGGGGGGGGGGG 241
>AE014298-1193|AAF46385.1| 679|Drosophila melanogaster CG33181-PA
protein.
Length = 679
Score = 29.9 bits (64), Expect = 7.4
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGG G + G G GG G G
Sbjct: 194 GGGGGGGGGGGGIGGAGGGGGGGGG 218
>AY075501-1|AAO39496.1| 299|Drosophila melanogaster RE52135p
protein.
Length = 299
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 GGGGGGRGXXXRV*GRGEGGXGXXG 420
GGGGGGRG GRG GG G
Sbjct: 20 GGGGGGRGFGGGGGGRGGGGGRGGG 44
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,528,898
Number of Sequences: 53049
Number of extensions: 355977
Number of successful extensions: 5097
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3917
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6560139810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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