Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B14
         (1216 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    90   1e-19
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    27   0.84 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   4.5  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 89.8 bits (213), Expect = 1e-19
 Identities = 55/182 (30%), Positives = 102/182 (56%), Gaps = 8/182 (4%)
 Frame = +1

Query: 412 IKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVAC 591
           ++  G + P  ++ F     R  + + ++  V +  Y++PTP+QR A+  +L  R ++AC
Sbjct: 162 VRVSGENPPDHVESFE----RSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMAC 217

Query: 592 APTGSGKTAAFIVPLLH-------TLGTHQGGPRGLILCPTRELAHQIYREALRLSASTQ 750
           A TGSGKTAAF++P++H       +L      P  +I+ PTRELA QI+ E  + +  T+
Sbjct: 218 AQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTK 277

Query: 751 LRVTVVKNLKESKVKEREATFRKS-DIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXD 927
           L+V V  +   + V+ +    R    ++++TP RL   +  D+  ++   V ++++DE D
Sbjct: 278 LKVCV--SYGGTAVQHQLQLMRGGCHVLVATPGRLLDFI--DRGYVTFENVNFVVLDEAD 333

Query: 928 KL 933
           ++
Sbjct: 334 RM 335


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 27.5 bits (58), Expect = 0.84
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +1

Query: 58  SAXXMXASXLXNQFTQGXPFQXPVLGVXNNQQQTKQAPLKQAI 186
           S+    +S   N  + G     PV G+   QQQ ++ P +QA+
Sbjct: 45  SSSSRNSSSCNNSSSSGTHSDRPVAGMLQQQQQQQRQPQRQAV 87


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 449 KTFRT*LSATMFHRLLLIQSPSVDTVNPLQFNG 547
           K F+    ++ F +L      S+DTV PL F+G
Sbjct: 260 KVFQKIFYSSAFSKLRGWDGRSIDTVTPLNFDG 292


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 893,950
Number of Sequences: 2352
Number of extensions: 16811
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138156486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)