Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_B14
(1216 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 98 1e-20
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 98 1e-20
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 98 1e-20
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 96 5e-20
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 96 5e-20
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 93 3e-19
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 93 4e-19
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 92 8e-19
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 91 2e-18
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 91 2e-18
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 88 1e-17
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 88 1e-17
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 87 2e-17
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 87 2e-17
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 87 2e-17
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 87 2e-17
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 84 2e-16
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 84 2e-16
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 83 4e-16
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 83 5e-16
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 83 5e-16
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 83 5e-16
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 82 7e-16
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 81 2e-15
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 81 2e-15
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 79 6e-15
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 77 3e-14
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 76 6e-14
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 75 1e-13
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 75 1e-13
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 75 1e-13
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 71 2e-12
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 71 2e-12
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 71 2e-12
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 69 5e-12
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 69 5e-12
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 68 1e-11
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 68 1e-11
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 67 2e-11
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 67 2e-11
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 67 2e-11
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 66 4e-11
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 63 4e-10
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 60 3e-09
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 48 1e-05
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 44 2e-04
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 41 0.002
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 39 0.006
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 36 0.058
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 36 0.076
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 31 1.6
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 30 3.8
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 30 3.8
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 98.3 bits (234), Expect = 1e-20
Identities = 59/189 (31%), Positives = 106/189 (56%), Gaps = 15/189 (7%)
Frame = +1
Query: 412 IKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVAC 591
++ G +P A++ F++ A+++ V + GYS+PTPVQ+ ++ +L +R +++C
Sbjct: 127 VEVSGDSVPAAIEHFNEA----GFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSC 182
Query: 592 APTGSGKTAAFIVPLLH---------------TLGTHQGGPRGLILCPTRELAHQIYREA 726
A TGSGKTAAF++P++ T G P L+L PTRELA QI++EA
Sbjct: 183 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 242
Query: 727 LRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKVRW 906
+ S + ++ ++ +E+ + + I+I+TP RL ++ +Q I L R+
Sbjct: 243 TKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII--EQGFIGLAGCRY 300
Query: 907 LIIDEXDKL 933
L++DE D++
Sbjct: 301 LVLDEADRM 309
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 98.3 bits (234), Expect = 1e-20
Identities = 59/189 (31%), Positives = 106/189 (56%), Gaps = 15/189 (7%)
Frame = +1
Query: 412 IKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVAC 591
++ G +P A++ F++ A+++ V + GYS+PTPVQ+ ++ +L +R +++C
Sbjct: 111 VEVSGDSVPAAIEHFNEA----GFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSC 166
Query: 592 APTGSGKTAAFIVPLLH---------------TLGTHQGGPRGLILCPTRELAHQIYREA 726
A TGSGKTAAF++P++ T G P L+L PTRELA QI++EA
Sbjct: 167 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 226
Query: 727 LRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKVRW 906
+ S + ++ ++ +E+ + + I+I+TP RL ++ +Q I L R+
Sbjct: 227 TKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII--EQGFIGLAGCRY 284
Query: 907 LIIDEXDKL 933
L++DE D++
Sbjct: 285 LVLDEADRM 293
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 98.3 bits (234), Expect = 1e-20
Identities = 59/189 (31%), Positives = 106/189 (56%), Gaps = 15/189 (7%)
Frame = +1
Query: 412 IKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVAC 591
++ G +P A++ F++ A+++ V + GYS+PTPVQ+ ++ +L +R +++C
Sbjct: 108 VEVSGDSVPAAIEHFNEA----GFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSC 163
Query: 592 APTGSGKTAAFIVPLLH---------------TLGTHQGGPRGLILCPTRELAHQIYREA 726
A TGSGKTAAF++P++ T G P L+L PTRELA QI++EA
Sbjct: 164 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 223
Query: 727 LRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKVRW 906
+ S + ++ ++ +E+ + + I+I+TP RL ++ +Q I L R+
Sbjct: 224 TKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII--EQGFIGLAGCRY 281
Query: 907 LIIDEXDKL 933
L++DE D++
Sbjct: 282 LVLDEADRM 290
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 95.9 bits (228), Expect = 5e-20
Identities = 49/141 (34%), Positives = 92/141 (65%), Gaps = 2/141 (1%)
Frame = +1
Query: 517 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQ-GGPRGLILCPT 693
G+++PTP+QR+ + C+++ + +VA + TGSGKTAAF++P+L L G R L++ PT
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
Query: 694 RELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKS-DIVISTPNRLCYLLNQ 870
RELA Q ++ L T LR + + +++E+ +T ++ DI+++TP RL +++
Sbjct: 103 RELALQTFKVVKELGRFTGLRCACL--VGGDQIEEQFSTIHENPDILLATPGRLLHVI-- 158
Query: 871 DQVNISLXKVRWLIIDEXDKL 933
++++ L V++++ DE D+L
Sbjct: 159 VEMDLRLSYVQYVVFDEADRL 179
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 95.9 bits (228), Expect = 5e-20
Identities = 49/141 (34%), Positives = 92/141 (65%), Gaps = 2/141 (1%)
Frame = +1
Query: 517 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQ-GGPRGLILCPT 693
G+++PTP+QR+ + C+++ + +VA + TGSGKTAAF++P+L L G R L++ PT
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
Query: 694 RELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKS-DIVISTPNRLCYLLNQ 870
RELA Q ++ L T LR + + +++E+ +T ++ DI+++TP RL +++
Sbjct: 103 RELALQTFKVVKELGRFTGLRCACL--VGGDQIEEQFSTIHENPDILLATPGRLLHVI-- 158
Query: 871 DQVNISLXKVRWLIIDEXDKL 933
++++ L V++++ DE D+L
Sbjct: 159 VEMDLRLSYVQYVVFDEADRL 179
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 93.5 bits (222), Expect = 3e-19
Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 16/190 (8%)
Frame = +1
Query: 412 IKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVAC 591
++A G +P + FSDL++ + + + + GY PTPVQ+ ++ + R +++C
Sbjct: 154 VEATGDDVPQPISLFSDLSLH----EWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSC 209
Query: 592 APTGSGKTAAFIVPL-----------LHTLGTHQGG-----PRGLILCPTRELAHQIYRE 723
A TGSGKTAAF+VPL +H T GG P L+L PTREL+ QI+ E
Sbjct: 210 AQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNE 269
Query: 724 ALRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKVR 903
+ + + T + ++ +E+ + I+I+TP RL ++ DQ I + R
Sbjct: 270 SRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVM--DQGLIGMEGCR 327
Query: 904 WLIIDEXDKL 933
+L++DE D++
Sbjct: 328 YLVLDEADRM 337
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 93.1 bits (221), Expect = 4e-19
Identities = 59/169 (34%), Positives = 95/169 (56%), Gaps = 16/169 (9%)
Frame = +1
Query: 475 YNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQ-IVACAPTGSGKTAAFIVPLL---- 639
Y +P +++ + Q G+SEPT +Q + + DRQ ++ A TGSGKT AF +PL+
Sbjct: 160 YFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLL 219
Query: 640 -------HTLGTHQGGPRGLILCPTRELAHQIYREALRLSASTQLRVT-VVKNLKESKVK 795
T T GPR LI+ PTREL QI + L ++TQL T +V L + K +
Sbjct: 220 ESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVK-Q 278
Query: 796 EREATFRKSDIVISTPNRLCYLLNQDQVNISLXK---VRWLIIDEXDKL 933
ER + ++ DIV++TP RL ++ + + L + ++ L++DE D++
Sbjct: 279 ERIISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRM 327
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 91.9 bits (218), Expect = 8e-19
Identities = 61/190 (32%), Positives = 101/190 (53%), Gaps = 10/190 (5%)
Frame = +1
Query: 394 FRNEHGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLED 573
FR + I G +P L+++ + P + V + GY EPTP+QRQA+ L++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEA----GFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQN 338
Query: 574 RQIVACAPTGSGKTAAFIVPLLHTLGT--------HQG-GPRGLILCPTRELAHQIYREA 726
R ++ A TGSGKTAAF++PLL + + H+ GP +I+ PTRELA QI E
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEET 398
Query: 727 LRLSASTQLRVTVVKNLKESKVKEREATFRKS-DIVISTPNRLCYLLNQDQVNISLXKVR 903
+ L + V + + +++ R ++VI+TP RL +L + + L +
Sbjct: 399 NKF--GKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVL--ENRYLLLNQCT 454
Query: 904 WLIIDEXDKL 933
++I+DE D++
Sbjct: 455 YVILDEADRM 464
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 90.6 bits (215), Expect = 2e-18
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 10/189 (5%)
Frame = +1
Query: 397 RNEHGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDR 576
R + I G H+P + FSD ++ +L++ +++ +P+P+Q Q++ M E R
Sbjct: 109 RRTNRIFTWGDHLPNIILRFSDSSMS----PSLLNRLSENSIRQPSPIQMQSIPFMTERR 164
Query: 577 QIVACAPTGSGKTAAFIVPLLHTL----------GTHQGGPRGLILCPTRELAHQIYREA 726
++A APTGSGKT AF +P++ + ++ ++L PTRELA Q Y E
Sbjct: 165 NVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYTEF 224
Query: 727 LRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKVRW 906
L+ A+T ++ + E + +DI++STPNR+ + L D+++ S +RW
Sbjct: 225 LKYCANT--------SISAANFSGEETDIQHADILVSTPNRIVFHL--DKIDTS--SLRW 272
Query: 907 LIIDEXDKL 933
L++DE D+L
Sbjct: 273 LVVDESDRL 281
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 90.6 bits (215), Expect = 2e-18
Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 5/146 (3%)
Frame = +1
Query: 478 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTH 657
N+ + ++ + GYS+PTP+Q+ + L + I ACA TG+GKTAAF++P+L +
Sbjct: 154 NLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYR 213
Query: 658 QGG---PRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKS-D 825
G R L+L PTRELA Q+++ +LS QL V + + +K +EA R D
Sbjct: 214 PKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLD--LKAQEAALRSGPD 271
Query: 826 IVISTPNRLC-YLLNQDQVNISLXKV 900
+V++TP RL +L N N+S +V
Sbjct: 272 VVVATPGRLIDHLHNSPSFNLSNIEV 297
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 87.8 bits (208), Expect = 1e-17
Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 9/171 (5%)
Frame = +1
Query: 448 KDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFI 627
K FSD ++PQ++ V + GY+ TP+Q+ + + + + I+ACA TGSGKTAAF+
Sbjct: 298 KSFSDS----DIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFL 353
Query: 628 VPLLHTLGTH-------QGG--PRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLK 780
+P++ L +GG PR +IL PTRELA QIY E + S + + + V
Sbjct: 354 LPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYG-G 412
Query: 781 ESKVKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
+ + + I++ T R+ + I L K R+L++DE D++
Sbjct: 413 INVGYNKSQIMKGCTIIVGTIGRVKHFCEDGA--IKLDKCRYLVLDEADRM 461
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 87.8 bits (208), Expect = 1e-17
Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 9/171 (5%)
Frame = +1
Query: 448 KDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFI 627
K FSD ++PQ++ V + GY+ TP+Q+ + + + + I+ACA TGSGKTAAF+
Sbjct: 298 KSFSDS----DIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFL 353
Query: 628 VPLLHTLGTH-------QGG--PRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLK 780
+P++ L +GG PR +IL PTRELA QIY E + S + + + V
Sbjct: 354 LPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYG-G 412
Query: 781 ESKVKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
+ + + I++ T R+ + I L K R+L++DE D++
Sbjct: 413 INVGYNKSQIMKGCTIIVGTIGRVKHFCEDGA--IKLDKCRYLVLDEADRM 461
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 87.0 bits (206), Expect = 2e-17
Identities = 53/161 (32%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Frame = +1
Query: 478 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------ 639
N+ + + V GYS+ TP+Q+ A+ + + I+ACA TGSGKTAAF++P++
Sbjct: 347 NLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDD 406
Query: 640 HTLGT-HQGG--PRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREAT 810
+ L T +GG PR +IL PTRELA QIY E + + T + + V + +
Sbjct: 407 NNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIE 466
Query: 811 FRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
+ + I++ T R+ + ++ I L K R+ ++DE D++
Sbjct: 467 -KGATIIVGTVGRIKHFC--EEGTIKLDKCRFFVLDEADRM 504
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 87.0 bits (206), Expect = 2e-17
Identities = 53/161 (32%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Frame = +1
Query: 478 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------ 639
N+ + + V GYS+ TP+Q+ A+ + + I+ACA TGSGKTAAF++P++
Sbjct: 347 NLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDD 406
Query: 640 HTLGT-HQGG--PRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREAT 810
+ L T +GG PR +IL PTRELA QIY E + + T + + V + +
Sbjct: 407 NNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIE 466
Query: 811 FRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
+ + I++ T R+ + ++ I L K R+ ++DE D++
Sbjct: 467 -KGATIIVGTVGRIKHFC--EEGTIKLDKCRFFVLDEADRM 504
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 87.0 bits (206), Expect = 2e-17
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 8/203 (3%)
Frame = +1
Query: 349 TEXLKKXLIQXEENRFRNE-HGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYS 525
TE +++ + + E +R E I G P +K ++ V +++ + + YS
Sbjct: 271 TEEIRR-MTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLK----MMNVLKKFEYS 325
Query: 526 EPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL-HTLGTHQ----GGPRGLILCP 690
+PT +Q QA+ ++ R ++ A TGSGKT AF++P+ H L + GP +IL P
Sbjct: 326 KPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAP 385
Query: 691 TRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRK-SDIVISTPNRLCYLLN 867
TRELA Q Y+EA + + L+V + E+ A ++ ++IV+ TP R+ +L
Sbjct: 386 TRELAMQTYKEANKFAKPLGLKVACTYG--GVGISEQIADLKRGAEIVVCTPGRMIDVLA 443
Query: 868 QDQVNI-SLXKVRWLIIDEXDKL 933
+ + +L +V +L++DE D++
Sbjct: 444 ANSGKVTNLRRVTYLVLDEADRM 466
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 87.0 bits (206), Expect = 2e-17
Identities = 53/161 (32%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Frame = +1
Query: 478 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------ 639
N+ + + V GYS+ TP+Q+ A+ + + I+ACA TGSGKTAAF++P++
Sbjct: 347 NLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDD 406
Query: 640 HTLGT-HQGG--PRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREAT 810
+ L T +GG PR +IL PTRELA QIY E + + T + + V + +
Sbjct: 407 NNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIE 466
Query: 811 FRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
+ + I++ T R+ + ++ I L K R+ ++DE D++
Sbjct: 467 -KGATIIVGTVGRIKHFC--EEGTIKLDKCRFFVLDEADRM 504
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 84.2 bits (199), Expect = 2e-16
Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Frame = +1
Query: 532 TPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRGLILCPTRELAHQ 711
TPVQ + +LE I+ CA TG+GKT AF +P+L L G LIL PTRELA Q
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQ 172
Query: 712 IYREALRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLCYLLNQDQVNIS- 888
I + L L+ +V+ + + RE + + +V++TP RL L+ D I+
Sbjct: 173 IAEQFTALGKPITLKCSVIVGGRSLIHQARELS-ERPHVVVATPGRLADLIESDPDTIAK 231
Query: 889 -LXKVRWLIIDEXDKL 933
K+++ ++DE D++
Sbjct: 232 VFKKIQFFVLDEADRM 247
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 84.2 bits (199), Expect = 2e-16
Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Frame = +1
Query: 532 TPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRGLILCPTRELAHQ 711
TPVQ + +LE I+ CA TG+GKT AF +P+L L G LIL PTRELA Q
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQ 172
Query: 712 IYREALRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLCYLLNQDQVNIS- 888
I + L L+ +V+ + + RE + + +V++TP RL L+ D I+
Sbjct: 173 IAEQFTALGKPITLKCSVIVGGRSLIHQARELS-ERPHVVVATPGRLADLIESDPDTIAK 231
Query: 889 -LXKVRWLIIDEXDKL 933
K+++ ++DE D++
Sbjct: 232 VFKKIQFFVLDEADRM 247
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 83.0 bits (196), Expect = 4e-16
Identities = 52/162 (32%), Positives = 87/162 (53%)
Frame = +1
Query: 448 KDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFI 627
K F++L V Q L D + G+ +P+ +Q+ A+ L+ + ++ A TGSGKT AF
Sbjct: 44 KSFAEL----GVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFA 99
Query: 628 VPLLHTLGTHQGGPRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREA 807
+P+L +L H L+L PTRELA QI ++ L + L V+ + A
Sbjct: 100 IPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVG-GVDMAAQAMA 158
Query: 808 TFRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
R+ I+++TP RL L ++ +L +++LI+DE D++
Sbjct: 159 LARRPHIIVATPGRLVDHL-ENTKGFNLKALKFLIMDEADRI 199
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 82.6 bits (195), Expect = 5e-16
Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 478 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------ 639
N+ + + V GY++ TP+Q+ + + + I+ACA TGSGKTAAF++P++
Sbjct: 558 NLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDE 617
Query: 640 HTLGT-HQGG--PRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREAT 810
+ L T +GG PR +IL PTREL QIY E + + T + + V + +
Sbjct: 618 NDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIE 677
Query: 811 FRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
+ + I++ T R+ + ++ I L K R+ ++DE D++
Sbjct: 678 -KGATIIVGTVGRIKHFC--EEGTIKLDKCRFFVLDEADRM 715
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 82.6 bits (195), Expect = 5e-16
Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 478 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------ 639
N+ + + V GY++ TP+Q+ + + + I+ACA TGSGKTAAF++P++
Sbjct: 558 NLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDE 617
Query: 640 HTLGT-HQGG--PRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREAT 810
+ L T +GG PR +IL PTREL QIY E + + T + + V + +
Sbjct: 618 NDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIE 677
Query: 811 FRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
+ + I++ T R+ + ++ I L K R+ ++DE D++
Sbjct: 678 -KGATIIVGTVGRIKHFC--EEGTIKLDKCRFFVLDEADRM 715
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 82.6 bits (195), Expect = 5e-16
Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 478 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------ 639
N+ + + V GY++ TP+Q+ + + + I+ACA TGSGKTAAF++P++
Sbjct: 558 NLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDE 617
Query: 640 HTLGT-HQGG--PRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREAT 810
+ L T +GG PR +IL PTREL QIY E + + T + + V + +
Sbjct: 618 NDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIE 677
Query: 811 FRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
+ + I++ T R+ + ++ I L K R+ ++DE D++
Sbjct: 678 -KGATIIVGTVGRIKHFC--EEGTIKLDKCRFFVLDEADRM 715
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 82.2 bits (194), Expect = 7e-16
Identities = 55/154 (35%), Positives = 86/154 (55%), Gaps = 16/154 (10%)
Frame = +1
Query: 520 YSEPTPVQRQAMACMLEDRQ-IVACAPTGSGKTAAFIVPLL-----------HTLGTHQG 663
+SEPT +Q + + DRQ ++ A TGSGKT AF +PL+ T T
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 664 GPRGLILCPTRELAHQIYREALRLSASTQLRVT-VVKNLKESKVKEREATFRKSDIVIST 840
GPR LI+ PTREL QI + L ++TQL T +V L + K +ER + ++ DIV++T
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVK-QERIISQQRPDIVVAT 126
Query: 841 PNRLCYLLNQDQVNISLXK---VRWLIIDEXDKL 933
P RL ++ + + L + ++ L++DE D++
Sbjct: 127 PGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRM 160
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 81.0 bits (191), Expect = 2e-15
Identities = 49/162 (30%), Positives = 88/162 (54%), Gaps = 11/162 (6%)
Frame = +1
Query: 481 VPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------- 639
+PQ L D + + + PTP+QR + ++ +VACA TGSGKT AF++P +
Sbjct: 743 LPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEF 802
Query: 640 ---HTLGTHQGGPRGLILCPTRELAHQIYREALRLSASTQLRVTVV-KNLKESKVKEREA 807
+ + PR LI+ PTREL +Q + A +L+ T L+ + + +
Sbjct: 803 EKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLR 862
Query: 808 TFRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
+F + +I+++T RL +N +V SL K++++++DE D++
Sbjct: 863 SFSQLNILVATMGRLQDFVNAGEV--SLSKMKYIVLDEADRM 902
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 81.0 bits (191), Expect = 2e-15
Identities = 49/162 (30%), Positives = 88/162 (54%), Gaps = 11/162 (6%)
Frame = +1
Query: 481 VPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------- 639
+PQ L D + + + PTP+QR + ++ +VACA TGSGKT AF++P +
Sbjct: 743 LPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEF 802
Query: 640 ---HTLGTHQGGPRGLILCPTRELAHQIYREALRLSASTQLRVTVV-KNLKESKVKEREA 807
+ + PR LI+ PTREL +Q + A +L+ T L+ + + +
Sbjct: 803 EKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLR 862
Query: 808 TFRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
+F + +I+++T RL +N +V SL K++++++DE D++
Sbjct: 863 SFSQLNILVATMGRLQDFVNAGEV--SLSKMKYIVLDEADRM 902
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 79.0 bits (186), Expect = 6e-15
Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 5/191 (2%)
Frame = +1
Query: 376 QXEENRFRNEHGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAM 555
Q E +++ + + + GR +P + +F++ + + + L + +PT +Q +
Sbjct: 106 QYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHELLYGK-----FQKPTVIQSISW 160
Query: 556 ACMLEDRQIVACAPTGSGKTAAFIVP-LLH-TLGTHQ---GGPRGLILCPTRELAHQIYR 720
+ R I++ A TGSGKT AF++P L+H T H+ GP L+L PTRELA Q+
Sbjct: 161 PIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQE 220
Query: 721 EALRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKV 900
++ S L++T + SK + R DIV++TP RL L+ N + K
Sbjct: 221 VSIDFCHSLGLKMTCLFG-GASKGPQARDLERGVDIVVATPGRLLDFLDNGTTN--MKKC 277
Query: 901 RWLIIDEXDKL 933
+L++DE D++
Sbjct: 278 SYLVLDEADRM 288
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 76.6 bits (180), Expect = 3e-14
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Frame = +1
Query: 397 RNEHGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVT-QCGYSEPTPVQRQAMACMLED 573
R GI G HIPP + F ++ P++L++ + Q G PT +Q Q + L
Sbjct: 172 RKRLGISCEGDHIPPPIGSFLEM----KFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSG 227
Query: 574 RQIVACAPTGSGKTAAFIVPL--------LHTLGTHQGGPRGLILCPTRELAHQIYR--- 720
R ++ A TGSGKT F++PL + GP GLI+ P+RELA QI+
Sbjct: 228 RDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLII 287
Query: 721 ---EALRLSASTQLRVTVVKNLKESKVKEREATFRKS-DIVISTPNRLCYLLNQDQVNIS 888
+AL + ++R + + + E+ R IV++TP RL +L + +N+
Sbjct: 288 EMFDALGKAGLPEMRAGLC--IGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLE 345
Query: 889 LXKVRWLIIDEXDKL 933
+ R+L++DE D++
Sbjct: 346 V--CRYLVLDEADRM 358
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 75.8 bits (178), Expect = 6e-14
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 5/186 (2%)
Frame = +1
Query: 391 RFRNEHGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLE 570
R +N ++ G P + F+ ++ + L++ + + Y +PTP+Q A+ L
Sbjct: 246 RLQNTMNLRVGGLKPPRPVCSFA----HFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALS 301
Query: 571 DRQIVACAPTGSGKTAAFIVP-LLHTLGTHQ----GGPRGLILCPTRELAHQIYREALRL 735
R ++ A TGSGKTAA++ P ++H + GP +I+ PTRELA Q+++EA +
Sbjct: 302 GRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKF 361
Query: 736 SASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLII 915
+ + E +++V+ TP R+ L+ N + +L+
Sbjct: 362 CKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATN--FLRTTFLVF 419
Query: 916 DEXDKL 933
DE D++
Sbjct: 420 DEADRM 425
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 74.9 bits (176), Expect = 1e-13
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Frame = +1
Query: 493 LVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVP---LLHTLGTHQG 663
L+ V G++ T +Q +++ +LE + ++A A TGSGKT AF++P LLH L Q
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 664 GPRG-LILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVIST 840
G +I+ PTREL+ Q Y L + L +V ++ E++ + I+++T
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMG-GSNRSAEKDKLAKGVSILVAT 197
Query: 841 PNRLC-YLLNQDQVNISLXKVRWLIIDEXDKL 933
P RL +L N D N + ++ LIIDE D++
Sbjct: 198 PGRLLDHLQNTD--NFLVRNMKCLIIDEADRI 227
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 74.9 bits (176), Expect = 1e-13
Identities = 51/172 (29%), Positives = 92/172 (53%), Gaps = 7/172 (4%)
Frame = +1
Query: 439 PALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTA 618
P K F+D + + + ++ ++ + G+ + VQ ++ LE++ I+ A TGSGKT
Sbjct: 86 PEHKTFAD----FGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTG 141
Query: 619 AFIVPLLHTL----GTHQG--GPRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLK 780
AF++PL+ L T+ G GP +I+ PT+EL QIY+ ++LS + + NL
Sbjct: 142 AFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAI--NLC 199
Query: 781 ESKVKEREATFR-KSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
+ +E +S +V++TP +L + + +L V +L++DE D L
Sbjct: 200 DINEEENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCTL--VSYLVMDEADLL 249
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 74.5 bits (175), Expect = 1e-13
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Frame = +1
Query: 394 FRNEHGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLED 573
FR E +K IPP + F + +++ + + G+ +P+P+Q Q +L
Sbjct: 70 FREESTVK-----IPPPVNSFEQA---FGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSG 121
Query: 574 RQIVACAPTGSGKTAAFIVP-LLH---TLGTHQ-------GGPRGLILCPTRELAHQIYR 720
+ + + TGSGKT AF++P LLH L ++ P L+L PTRELA QI
Sbjct: 122 QDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEG 181
Query: 721 EALRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKV 900
E + S + V + S+ ++ EA +IVI+TP RL L N D V ISL V
Sbjct: 182 EVKKYSYNGYKSVCLYGG--GSRPEQVEACRGGVEIVIATPGRLTDLSN-DGV-ISLASV 237
Query: 901 RWLIIDEXDKL 933
++++DE D++
Sbjct: 238 TYVVLDEADRM 248
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 70.5 bits (165), Expect = 2e-12
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 1/161 (0%)
Frame = +1
Query: 454 FSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVP 633
F D ++ + +A+ D CG+ P+ VQ + + + +V A +G GKTA F++
Sbjct: 43 FRDFLLKPEILRAIGD----CGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVIT 98
Query: 634 LLHTLGTHQGGPRGLILCPTRELAHQIYREALRLSASTQ-LRVTVVKNLKESKVKEREAT 810
L L G + +C TRELA QI +E R S ++V V K E
Sbjct: 99 TLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLA 158
Query: 811 FRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
IV+ TP R+ L + + L KV++ ++DE DK+
Sbjct: 159 NDCPHIVVGTPGRMLALARSGK--LKLDKVKYFVLDECDKM 197
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 70.5 bits (165), Expect = 2e-12
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 1/161 (0%)
Frame = +1
Query: 454 FSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVP 633
F D ++ + +A+ D CG+ P+ VQ + + + +V A +G GKTA F++
Sbjct: 43 FRDFLLKPEILRAIGD----CGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVIT 98
Query: 634 LLHTLGTHQGGPRGLILCPTRELAHQIYREALRLSASTQ-LRVTVVKNLKESKVKEREAT 810
L L G + +C TRELA QI +E R S ++V V K E
Sbjct: 99 TLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLA 158
Query: 811 FRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
IV+ TP R+ L + + L KV++ ++DE DK+
Sbjct: 159 NDCPHIVVGTPGRMLALARSGK--LKLDKVKYFVLDECDKM 197
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 70.5 bits (165), Expect = 2e-12
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 1/161 (0%)
Frame = +1
Query: 454 FSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVP 633
F D ++ + +A+ D CG+ P+ VQ + + + +V A +G GKTA F++
Sbjct: 42 FRDFLLKPEILRAIGD----CGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVIT 97
Query: 634 LLHTLGTHQGGPRGLILCPTRELAHQIYREALRLSASTQ-LRVTVVKNLKESKVKEREAT 810
L L G + +C TRELA QI +E R S ++V V K E
Sbjct: 98 TLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLA 157
Query: 811 FRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
IV+ TP R+ L + + L KV++ ++DE DK+
Sbjct: 158 NDCPHIVVGTPGRMLALARSGK--LKLDKVKYFVLDECDKM 196
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 69.3 bits (162), Expect = 5e-12
Identities = 45/151 (29%), Positives = 77/151 (50%)
Frame = +1
Query: 481 VPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQ 660
+ Q ++ + + P+PVQ +A+ L R ++ A +G+GKT F V + L +
Sbjct: 29 IGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRS 88
Query: 661 GGPRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVIST 840
+ +I+ PTRE++ QI +E +R A T R +V K+ + + IVI T
Sbjct: 89 SHIQKVIVTPTREISVQI-KETVRKVAPTGARTSVYVGGSAHKLNLIDLKQTRPQIVIGT 147
Query: 841 PNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
P R+ L+ +N+S V + ++DE DKL
Sbjct: 148 PGRIAQLVKLGAMNMS--HVDFFVLDEADKL 176
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 69.3 bits (162), Expect = 5e-12
Identities = 45/151 (29%), Positives = 77/151 (50%)
Frame = +1
Query: 481 VPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQ 660
+ Q ++ + + P+PVQ +A+ L R ++ A +G+GKT F V + L +
Sbjct: 29 IGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRS 88
Query: 661 GGPRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVIST 840
+ +I+ PTRE++ QI +E +R A T R +V K+ + + IVI T
Sbjct: 89 SHIQKVIVTPTREISVQI-KETVRKVAPTGARTSVYVGGSAHKLNLIDLKQTRPQIVIGT 147
Query: 841 PNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
P R+ L+ +N+S V + ++DE DKL
Sbjct: 148 PGRIAQLVKLGAMNMS--HVDFFVLDEADKL 176
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 68.1 bits (159), Expect = 1e-11
Identities = 35/140 (25%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Frame = +1
Query: 517 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRGLILCPTR 696
G+ +P+ +Q++A+ + ++A A +G+GKTA F V +L + + L++ PTR
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTR 107
Query: 697 ELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKS-DIVISTPNRLCYLLNQD 873
ELA QI + + + L V ++ + + V++ + +V+ TP R+ ++N++
Sbjct: 108 ELAQQI--QKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRN 165
Query: 874 QVNISLXKVRWLIIDEXDKL 933
++ S +++ ++DE D++
Sbjct: 166 ALDTS--RIKMFVLDEADEM 183
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 68.1 bits (159), Expect = 1e-11
Identities = 35/140 (25%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Frame = +1
Query: 517 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRGLILCPTR 696
G+ +P+ +Q++A+ + ++A A +G+GKTA F V +L + + L++ PTR
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTR 107
Query: 697 ELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKS-DIVISTPNRLCYLLNQD 873
ELA QI + + + L V ++ + + V++ + +V+ TP R+ ++N++
Sbjct: 108 ELAQQI--QKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRN 165
Query: 874 QVNISLXKVRWLIIDEXDKL 933
++ S +++ ++DE D++
Sbjct: 166 ALDTS--RIKMFVLDEADEM 183
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 67.3 bits (157), Expect = 2e-11
Identities = 40/139 (28%), Positives = 75/139 (53%)
Frame = +1
Query: 517 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRGLILCPTR 696
G+ +P+ +Q++A+ +L+ R ++A A +G+GKTA F + +L +L T + LIL PTR
Sbjct: 45 GFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTR 104
Query: 697 ELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLCYLLNQDQ 876
ELA QI + L L ++ R+ + + +V TP R+ ++ +
Sbjct: 105 ELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQ-HVVSGTPGRVFDMIRRR- 162
Query: 877 VNISLXKVRWLIIDEXDKL 933
N+ ++ L++DE D++
Sbjct: 163 -NLRTRAIKLLVLDEADEM 180
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 67.3 bits (157), Expect = 2e-11
Identities = 40/139 (28%), Positives = 75/139 (53%)
Frame = +1
Query: 517 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRGLILCPTR 696
G+ +P+ +Q++A+ +L+ R ++A A +G+GKTA F + +L +L T + LIL PTR
Sbjct: 45 GFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTR 104
Query: 697 ELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLCYLLNQDQ 876
ELA QI + L L ++ R+ + + +V TP R+ ++ +
Sbjct: 105 ELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQ-HVVSGTPGRVFDMIRRR- 162
Query: 877 VNISLXKVRWLIIDEXDKL 933
N+ ++ L++DE D++
Sbjct: 163 -NLRTRAIKLLVLDEADEM 180
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 67.3 bits (157), Expect = 2e-11
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Frame = +1
Query: 517 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRGLILCPTR 696
G+ +P+P+Q ++ L + I+A A G+GKT A+ +P++ + + +++ PTR
Sbjct: 62 GWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTR 121
Query: 697 ELAHQIYREALRLSASTQLRVTVVKNLKESK--VKEREATFRKSDIVISTPNRLCYLLNQ 870
ELA Q + + LS QL+V V + + + T +VI+TP R+ L+ +
Sbjct: 122 ELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVH---LVIATPGRILDLMEK 178
Query: 871 DQVNISLXKVRWLIIDEXDKL 933
+ K L++DE DKL
Sbjct: 179 GVAKMEHCKT--LVLDEADKL 197
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 66.5 bits (155), Expect = 4e-11
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Frame = +1
Query: 454 FSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVP 633
F D + + + L D Y++PT +QR +A L +V A TGSGKT A ++P
Sbjct: 78 FEDFPLSWRTLEGLKDN----DYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP 133
Query: 634 LLHTLGTHQGGP----RGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKER 801
+L L + P LI+ PTRELA Q + + A +V + S V
Sbjct: 134 VLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLV--IGGSDVAFE 191
Query: 802 EATFRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
+I++ TP RL ++++ +S ++ L++DE D++
Sbjct: 192 RNRISGINIIVCTPGRLLQHMDEN-AQMSCDSLQVLVLDEADRM 234
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 62.9 bits (146), Expect = 4e-10
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
Frame = +1
Query: 565 LEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGG-PRGLILCPTRELAHQIYREALRLS- 738
L R + APTGSGKT +++P+L +G+ + +IL P + L QI E R +
Sbjct: 154 LRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRWND 213
Query: 739 ASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLC-YLLNQDQVNISLXKVRWLII 915
S +V + + + + R+ +++++TP RL +L ++ I L K+R+LI+
Sbjct: 214 ESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDLSKLRFLIV 273
Query: 916 DEXDKLSR 939
DE D++ +
Sbjct: 274 DEADRMGK 281
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 60.1 bits (139), Expect = 3e-09
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Frame = +1
Query: 493 LVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTL-------- 648
+++T+ + Y+ +Q + +L+ ++ A T +GKTAAF +P++ +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 649 --GTHQGGPRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKS 822
GP LIL PTRELA QI+ EALR + ++ + + +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIH-EALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGC 510
Query: 823 DIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
DI+I T R+ + +ISL +R+L+ DE D+L
Sbjct: 511 DILIGTCGRIMDFTVKS--HISLLHLRFLVFDEADRL 545
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 58.0 bits (134), Expect = 1e-08
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Frame = +1
Query: 520 YSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPR---GLILCP 690
Y T VQ + +L +V +PTGSGKT AF++P++ + + P LIL P
Sbjct: 29 YKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSP 88
Query: 691 TRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNRLCYLLNQ 870
+REL QI + L V V ++ + + +I+++TP RL ++
Sbjct: 89 SRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQIIQH 148
Query: 871 DQVNIS--LXKVRWLIIDEXDKLS 936
++ I+ + ++ L+IDE D+ +
Sbjct: 149 EKTLIARKMRTLQLLVIDEADRFN 172
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 54.0 bits (124), Expect = 2e-07
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Frame = +1
Query: 442 ALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLED--RQIVACAPTGSGKT 615
++ F +L ++ V +AL DT+ + PT +Q A+ +L + ++A A +G+GKT
Sbjct: 207 SISSFRELRLKPEVLKAL-DTMN---FQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKT 262
Query: 616 AAFIVPLLHTLGTHQGGPRGLILCPTRELAHQIYREALRLSA-STQLRV-TVVKNLKESK 789
AAF++ +L + + P+ + L PT ELA QI ++ L++ +K +
Sbjct: 263 AAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA 322
Query: 790 VKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXD 927
++ R+ T IVI TP L Q I K+R L++DE D
Sbjct: 323 MRGRKLT---EQIVIGTPGITRDYL-QKYKCIDPSKIRCLVLDEAD 364
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 54.0 bits (124), Expect = 2e-07
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Frame = +1
Query: 442 ALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLED--RQIVACAPTGSGKT 615
++ F +L ++ V +AL DT+ + PT +Q A+ +L + ++A A +G+GKT
Sbjct: 232 SISSFRELRLKPEVLKAL-DTMN---FQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKT 287
Query: 616 AAFIVPLLHTLGTHQGGPRGLILCPTRELAHQIYREALRLSA-STQLRV-TVVKNLKESK 789
AAF++ +L + + P+ + L PT ELA QI ++ L++ +K +
Sbjct: 288 AAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA 347
Query: 790 VKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXD 927
++ R+ T IVI TP L Q I K+R L++DE D
Sbjct: 348 MRGRKLT---EQIVIGTPGITRDYL-QKYKCIDPSKIRCLVLDEAD 389
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 54.0 bits (124), Expect = 2e-07
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Frame = +1
Query: 442 ALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLED--RQIVACAPTGSGKT 615
++ F +L ++ V +AL DT+ + PT +Q A+ +L + ++A A +G+GKT
Sbjct: 616 SISSFRELRLKPEVLKAL-DTMN---FQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKT 671
Query: 616 AAFIVPLLHTLGTHQGGPRGLILCPTRELAHQIYREALRLSA-STQLRV-TVVKNLKESK 789
AAF++ +L + + P+ + L PT ELA QI ++ L++ +K +
Sbjct: 672 AAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA 731
Query: 790 VKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDEXD 927
++ R+ T IVI TP L Q I K+R L++DE D
Sbjct: 732 MRGRKLT---EQIVIGTPGITRDYL-QKYKCIDPSKIRCLVLDEAD 773
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 48.0 bits (109), Expect = 1e-05
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Frame = +1
Query: 436 PPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQ-IVACAPTGSGK 612
P L D L + + + G+ P+Q Q + E + ++ CAP GSGK
Sbjct: 1291 PTELLDLQPLPISAVTNKEFQTVFAESGFKVFNPIQTQVFRTVFESNENVIVCAPNGSGK 1350
Query: 613 TA-AFIVPLLHTLGTHQGGPRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESK 789
TA A + L H T + + + + P ++A ++Y + R + T+V E
Sbjct: 1351 TAIAELAVLRHFENTPEA--KAVYITPMEDMATKVYADWKR-RLEPAIGHTIVLLTGEQT 1407
Query: 790 VKEREATFRKSDIVISTPNRLCYLLNQDQVNISLXKVRWLIIDE 921
+ + A ++ ++ISTP R + + + S+ V+ I D+
Sbjct: 1408 MDLKLA--QRGQLIISTPERWDNISRRWKQRKSVQNVKLFIADD 1449
Score = 37.1 bits (82), Expect = 0.025
Identities = 31/144 (21%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Frame = +1
Query: 517 GYSEPTPVQRQAMACMLEDRQ-IVACAPTGSGKTAAFIVPLLHTLGTH--QGGP------ 669
GY +Q + L ++ ++ CAPTG+GKT ++ +L +G H + G
Sbjct: 471 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNHLAEDGSVKLDEF 530
Query: 670 RGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNR 849
+ + + P + L ++ + A +TV + ++++ + + F + +++ TP +
Sbjct: 531 KIVYIAPMKSLVQEMVGSFSKRLA--PFGITVGEMTGDAQMSKEQ--FMATQVIVCTPEK 586
Query: 850 LCYLLNQDQVNISLXKVRWLIIDE 921
+ + VR LIIDE
Sbjct: 587 YDVVTRKGGERAYNQMVRLLIIDE 610
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 44.4 bits (100), Expect = 2e-04
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Frame = +1
Query: 538 VQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLH-TLGTHQG--------GPRGLILCP 690
VQ+ ++ + E R +V APTG GKT AF++P + L Q P LI+
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 691 TRELAHQIY-REALRLSASTQLRVTVVKNLKESK-VKEREATFRKSDIVISTPNRLCYLL 864
T L Q++ R L L V ++++K K V T + DI T +L +
Sbjct: 79 TSALVDQLFNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIGKLKATI 138
Query: 865 NQDQVNISLXKVRWLIIDEXDKL 933
+ ++ L ++ +I+DE DK+
Sbjct: 139 --ECGDVCLDNLKTIILDEADKM 159
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 44.4 bits (100), Expect = 2e-04
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Frame = +1
Query: 538 VQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLH-TLGTHQG--------GPRGLILCP 690
VQ+ ++ + E R +V APTG GKT AF++P + L Q P LI+
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNCFEYTKPSPSILIMAS 178
Query: 691 TRELAHQIY-REALRLSASTQLRVTVVKNLKESK-VKEREATFRKSDIVISTPNRLCYLL 864
T L Q++ R L L V ++++K K V T + DI T +L +
Sbjct: 179 TSALVDQLFNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIGKLKATI 238
Query: 865 NQDQVNISLXKVRWLIIDEXDKL 933
+ ++ L ++ +I+DE DK+
Sbjct: 239 --ECGDVCLDNLKTIILDEADKM 259
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 44.0 bits (99), Expect = 2e-04
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Frame = +1
Query: 538 VQRQAMACMLEDRQIVACAPTGSGKTAAFIV----------PLLHTLGTHQGGPRGLILC 687
VQ++++ + + R ++ APTG GKT AF++ PLL + T P LIL
Sbjct: 118 VQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNIST-TPSPTILILA 176
Query: 688 PTRELAHQIYREALRLSASTQLR-VTVVKNLK-ESKVKEREATFRKSDIVISTPNRLCYL 861
T L Q++ L + + ++++K E V + T + DI T +L
Sbjct: 177 NTNSLVEQLFNRCEVLLGLIDMEDIIPIRDIKIEKLVASYQFTKDQCDIAFCTMGKL--K 234
Query: 862 LNQDQVNISLXKVRWLIIDEXDKL 933
+ + I L ++ +I+DE DK+
Sbjct: 235 ASIEDKTILLDNLKMMILDESDKM 258
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 40.7 bits (91), Expect = 0.002
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 664 GPRGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFR-KSDIVIST 840
GP +I+ PT+EL QIY+ ++LS + + NL + +E +S +V++T
Sbjct: 96 GPSAVIIAPTKELITQIYKLFVKLSQALPFLQAI--NLCDINEEENSVWLEDRSHVVVTT 153
Query: 841 PNRLCYLLNQDQVNISLXKVRWLIIDEXDKL 933
P +L + + +L V +L++DE D L
Sbjct: 154 PGKLLRMCSLRPEYCTL--VSYLVMDEADLL 182
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1
Query: 481 VPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPL 636
+P+ L D ++ ++ PT VQ +A+ +L + A TGSGKT AF +P+
Sbjct: 10 IPE-LSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPI 60
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 35.9 bits (79), Expect = 0.058
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Frame = +1
Query: 580 IVACAPTGSGKTAAFIVPLLHTLGTHQGGPRGLILCPTRELAHQIYREALRLSASTQLRV 759
++ CAPTG+GKT ++ +L+T+ HQ RG I+ ++ + +AL +T++
Sbjct: 111 LLICAPTGAGKTNIAMLTILNTIHEHQNS-RGDIMKDDFKIIYIAPMKAL----ATEMTE 165
Query: 760 TVVKNLKESKVKEREAT---------FRKSDIVISTPNRLCYLLNQDQVNISLXK-VRWL 909
+ K L +K +E T + +++ TP + + + + SL VR L
Sbjct: 166 SFGKRLAPLGLKVKELTGDTQLSRNEVADTQMLVLTPEKWDVITRKSTSDNSLINVVRLL 225
Query: 910 IIDE 921
IIDE
Sbjct: 226 IIDE 229
Score = 34.3 bits (75), Expect = 0.18
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Frame = +1
Query: 433 IPPALKDFSDLTVRYNVP-QALVDTVTQCGYSEP--TPVQRQAMACMLE-DRQIVACAPT 600
+P + K +DL +P + L ++ + Y+ P+Q Q C+ + D+ + APT
Sbjct: 926 LPKSFKSHTDLLDLEPLPIKTLKNSKFEAIYNFDYFNPIQAQVFFCLYKTDKSALIGAPT 985
Query: 601 GSGKTAAFIVPLLHTLGTHQGGPRGLILCPTRELAHQ 711
GSGKT + + L H G + + + P + L +
Sbjct: 986 GSGKTLCAELAMFRLLQDHP-GMKVVYIAPLKSLVRE 1021
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 35.5 bits (78), Expect = 0.076
Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Frame = +1
Query: 517 GYSEPTPVQRQAMACMLEDRQ-IVACAPTGSGKTAAFIVPLLHTLGTH--QGGP------ 669
GY +Q + L ++ ++ CAPTG+GKT ++ +L +G H + G
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNHLAEDGSVKLEEF 332
Query: 670 RGLILCPTRELAHQIYREALRLSASTQLRVTVVKNLKESKVKEREATFRKSDIVISTPNR 849
+ + + PT+ L ++ + A + V E + + F + +++ TP +
Sbjct: 333 KIVYIAPTKSLVQEMVGSFSKRLAPFGITV------GEMTGQMNKEQFMATQVIVCTPEK 386
Query: 850 LCYLLNQDQVNISLXKVRWLIIDE 921
+ + VR LIIDE
Sbjct: 387 YDVVTRKGGERAYNQMVRLLIIDE 410
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 541 QRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRGLILCPTRELAHQIYR 720
Q+QA+ C+ ++ ++ A T +GKT + L Q R + P + L++Q YR
Sbjct: 130 QKQAILCIDNNQSVLVSAHTSAGKTVVATYAIAKCLREKQ---RVIYTSPIKALSNQKYR 186
Query: 721 E 723
E
Sbjct: 187 E 187
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +3
Query: 441 STKRLFGLDCPLQCSTGSC*YSHPVWIQ*THSSSTASHGLHVGGPSNSGVRSDGIG*NCR 620
+T+R GL L C G+C PVW T ++STAS + S SD R
Sbjct: 76 TTERWNGLTQFLFCVKGACSDPSPVWTNCTETTSTASTEFTISSTSLKTSTSDSTSTEPR 135
Query: 621 VYRT 632
+ T
Sbjct: 136 ISTT 139
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 541 QRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTL--GTHQGGP-RGLILCPTRELAHQ 711
Q + + LE + V APTGSGKT I L + T QG P R ++L P L Q
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKTEVAIYAALKHIEERTSQGKPSRVVLLVPKIPLVGQ 434
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 29.9 bits (64), Expect = 3.8
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = +1
Query: 535 PVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRGLILCPTRELAH-Q 711
P+QR A+ ++ V TG GK+ + +P L G L++ P L Q
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALLANGL------ALVVSPLISLVEDQ 142
Query: 712 IYR-EALRLSASTQLRVTVVKNLK--ESKVKEREATFRKSDIVISTPNRLC---YLLNQD 873
I + +L + +S+ T + K E + +++ FR ++ TP +L ++N+
Sbjct: 143 ILQLRSLGIDSSSLNANTSKEEAKRVEDAITNKDSKFR---LLYVTPEKLAKSKKMMNKL 199
Query: 874 QVNISLXKVRWLIIDE 921
+ ++S+ ++ + IDE
Sbjct: 200 EKSLSVGFLKLIAIDE 215
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 29.9 bits (64), Expect = 3.8
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = +1
Query: 535 PVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRGLILCPTRELAH-Q 711
P+QR A+ ++ V TG GK+ + +P L G L++ P L Q
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALLANGL------ALVVSPLISLVEDQ 165
Query: 712 IYR-EALRLSASTQLRVTVVKNLK--ESKVKEREATFRKSDIVISTPNRLC---YLLNQD 873
I + +L + +S+ T + K E + +++ FR ++ TP +L ++N+
Sbjct: 166 ILQLRSLGIDSSSLNANTSKEEAKRVEDAITNKDSKFR---LLYVTPEKLAKSKKMMNKL 222
Query: 874 QVNISLXKVRWLIIDE 921
+ ++S+ ++ + IDE
Sbjct: 223 EKSLSVGFLKLIAIDE 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,273,201
Number of Sequences: 27780
Number of extensions: 365814
Number of successful extensions: 965
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3349461018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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