Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_B08
(1209 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 41 6e-05
AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein p... 41 8e-05
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 40 1e-04
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 38 4e-04
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 38 6e-04
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 38 6e-04
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 37 0.001
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 37 0.001
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 37 0.001
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 36 0.002
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 36 0.002
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 35 0.004
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 35 0.004
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 29 0.36
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 25 3.4
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 25 4.4
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 24 7.7
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 41.1 bits (92), Expect = 6e-05
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 764 ISKIQQCYRCQKWGHSQRYCHG---IIKCVKCAGNHSYKKCNRNKTTEPPKCANCGSDHT 934
+ + +QCYRC ++GH+ CHG KC +CA + C R + KC C
Sbjct: 208 LERRRQCYRCYEYGHTAARCHGKDRSSKCHRCAEDKHEGPCTRER-----KCLGCEGPDA 262
Query: 935 ANYKL 949
+ L
Sbjct: 263 IGHSL 267
>AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein
protein.
Length = 298
Score = 40.7 bits (91), Expect = 8e-05
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 761 PISKIQQCYRCQKWGHSQRYCHGIIK---CVKC-AGNHSYKKCNRNKTTEPPKCANCGSD 928
P ++ ++C+RC + GH R C G + C++C A NH C T KC CG
Sbjct: 229 PSAESRRCFRCLERGHMVRECQGTNRSSLCIRCGAANHKAVNC-----TNDVKCLLCGGP 283
Query: 929 H 931
H
Sbjct: 284 H 284
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 40.3 bits (90), Expect = 1e-04
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Frame = +2
Query: 755 EPPISKIQQ--CYRCQKWGHSQRYCHGII----KCVKC-AGNHSYKKCNRNKTTEPPKCA 913
E P +QQ CYRC + GH R C + C++C A H K CN KCA
Sbjct: 353 EAPAINLQQQRCYRCLERGHIARECRSPVDRQKACIRCGAEGHLAKDCNAE-----VKCA 407
Query: 914 NCGSDHTANYKLC 952
C H + C
Sbjct: 408 VCSGPHRVGHSDC 420
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 38.3 bits (85), Expect = 4e-04
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Frame = +2
Query: 746 VTLEPPISKIQ-QCYRCQKWGHSQRYCHGIIK----CVKCAG-NHSYKKCNRNKTTEPPK 907
V PP + + +CYRC + GH C C++C H K C T PK
Sbjct: 649 VRAAPPTPRERVRCYRCLELGHWAHDCRSPDDRQNMCIRCGVVGHMAKVC-----TSQPK 703
Query: 908 CANCGSDHTANYKLC 952
C CG HT + C
Sbjct: 704 CLKCGGPHTIGHPDC 718
Score = 34.7 bits (76), Expect = 0.005
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = +2
Query: 668 SPILAVVPHDEEGKRILKVKKILNIDVTLEPPISKIQQCYRCQKWGHSQRYCHGIIKCVK 847
S + A P E R + ++ + P + C RC GH + C KC+K
Sbjct: 647 SKVRAAPPTPRERVRCYRCLELGHWAHDCRSPDDRQNMCIRCGVVGHMAKVCTSQPKCLK 706
Query: 848 CAGNHS 865
C G H+
Sbjct: 707 CGGPHT 712
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 37.9 bits (84), Expect = 6e-04
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Frame = +2
Query: 716 LKVKKILNIDVTLEPPISKIQQ--CYRCQKWGHSQRYCHGIIK----CVKC-AGNHSYKK 874
L++K + + E P + I++ CYRC + GH R CH + C++C H
Sbjct: 382 LRLKVLYTMCAVKEAPHTPIEKLRCYRCLERGHVSRDCHSPVNHSNVCIRCGTSGHLAAT 441
Query: 875 CNRNKTTEPPKCANCGSDHTANYKLC 952
C +CA+C H C
Sbjct: 442 CEAE-----VRCASCAGPHRMGSAQC 462
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 37.9 bits (84), Expect = 6e-04
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 668 SPILAVVPHDEEGKRILKVKKILNIDVTLEPPISKIQQCYRCQKWGHSQRYCHGIIKCVK 847
S I+ +P + +R + + ++ + P+ + Q C RC GH + C IKC
Sbjct: 375 SSIMEAMPVSVDRQRCYRCLERGHLARDCQSPVDRQQACIRCGADGHYAKSCTSEIKCAA 434
Query: 848 CAGNH 862
C G H
Sbjct: 435 CNGPH 439
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 37.1 bits (82), Expect = 0.001
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +2
Query: 779 QCYRCQKWGHSQRYCHGIIK---CVKC-AGNHSYKKCNRNKTTEPPKCANCGSDHTANYK 946
+C+RC + GH+ C G + C+ C A +H C T PKC CG H
Sbjct: 290 RCFRCLERGHTTADCAGEDRSSLCLHCGAADHRAASC-----TSDPKCIVCGGPHRIAAP 344
Query: 947 LCPXYP 964
+C P
Sbjct: 345 MCKGPP 350
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 36.7 bits (81), Expect = 0.001
Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = +2
Query: 668 SPILAVVPHDEEGKRILKVKKILNIDVTLEPPISKIQQCYRCQKWGHSQRYCHGIIKCVK 847
S + A P E +R + ++ +I + C RC GH R C KC
Sbjct: 493 SKVRAAPPTPPERQRCFRCLEMGHIASNCRSTADRQNLCIRCGLTGHKARSCQNEAKCAL 552
Query: 848 CAGNH--SYKKCNRN 886
C G H + +C R+
Sbjct: 553 CGGAHHIGHSECARS 567
Score = 34.3 bits (75), Expect = 0.007
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Frame = +2
Query: 776 QQCYRCQKWGHSQRYCHGIIK----CVKCA-GNHSYKKCNRNKTTEPPKCANCGSDHTAN 940
Q+C+RC + GH C C++C H + C KCA CG H
Sbjct: 506 QRCFRCLEMGHIASNCRSTADRQNLCIRCGLTGHKARSCQNEA-----KCALCGGAHHIG 560
Query: 941 YKLC 952
+ C
Sbjct: 561 HSEC 564
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 36.7 bits (81), Expect = 0.001
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +2
Query: 746 VTLEPPISKIQ-QCYRCQKWGHSQRYCHGIIK----CVKCAGNHSYKKCNRNKTTEPPKC 910
V + PP K +CYRC + GH+ R C + C++C G +K E +C
Sbjct: 538 VKMAPPTPKEHLRCYRCLEHGHNARDCRSPVDRQNVCIRC-GQEGHK---AGTCMEEIRC 593
Query: 911 ANCGSDHTANYKLC 952
C H + C
Sbjct: 594 GKCDGPHVIGDRTC 607
Score = 35.1 bits (77), Expect = 0.004
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 761 PISKIQQCYRCQKWGHSQRYCHGIIKCVKCAGNH--SYKKCNRNKT 892
P+ + C RC + GH C I+C KC G H + C+R+ T
Sbjct: 567 PVDRQNVCIRCGQEGHKAGTCMEEIRCGKCDGPHVIGDRTCDRSAT 612
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 36.3 bits (80), Expect = 0.002
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 746 VTLEPPISKIQQCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTE 898
+ E + K C+ C + GHS R C C +C H K C + +E
Sbjct: 365 INREEIVRKHGLCFNCLRKGHSARECRSTYVCQQCKRKHHSKLCKIGRLSE 415
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 35.9 bits (79), Expect = 0.002
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 776 QQCYRCQKWGHSQRYCHGIIKCVKCAGNH 862
Q C RC GH R C +KC C G H
Sbjct: 498 QLCIRCGSEGHKARDCSSYVKCAACGGPH 526
Score = 35.5 bits (78), Expect = 0.003
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Frame = +2
Query: 776 QQCYRCQKWGHSQRYCHGIIK----CVKCAG-NHSYKKCNRNKTTEPPKCANCGSDHTAN 940
Q+CYRC + GH C C++C H + C + KCA CG H
Sbjct: 475 QRCYRCLERGHLAHACRSSTDRQQLCIRCGSEGHKARDC-----SSYVKCAACGGPHRIG 529
Query: 941 YKLC 952
+ C
Sbjct: 530 HMSC 533
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 35.1 bits (77), Expect = 0.004
Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Frame = +2
Query: 539 KVVIRGLPNNIDLDKVKLELKSLLIPVIRVHKMHIRNYENNSSSPILAVVPHDEEGKRIL 718
+VV+ G+ N ID + +K L + L V +++ + + + + + E +
Sbjct: 383 EVVLTGIDNMIDEEAIKKALMTTLGKQSLVATVNLWERRDMTKRARVRLPRAEAELVKDR 442
Query: 719 KVKK-ILNIDVTLEPPIS-KIQQCYRCQKWGHSQRYCHG---IIKCVKCAGNHSYKKCNR 883
+++ V P +S ++ +C+RC + GH C G +C++C G+ ++K
Sbjct: 443 RLELGYTYCSVHEAPKVSGQLTRCFRCLERGHIAATCTGEDRSKRCLRC-GDQTHK---A 498
Query: 884 NKTTEPPKCANCGSDHTANYKLCPXYP 964
+ T KC CG H C P
Sbjct: 499 SGCTNEVKCMLCGGAHRIGAAACGGQP 525
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 35.1 bits (77), Expect = 0.004
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Frame = +2
Query: 776 QQCYRCQKWGHSQRYCHGIIK---CVKCAGNHSYKKCNRNKTTEPPKCANCGSD----HT 934
Q+CY+C K GH+ +C + C KC G +KK T KC +CG+ H
Sbjct: 275 QKCYKCWKVGHTSYHCREPDRSNLCWKC-GLSGHKK---QACTNSVKCLDCGTRSQNLHA 330
Query: 935 ANYKLCP 955
+CP
Sbjct: 331 TGSYMCP 337
Score = 28.7 bits (61), Expect = 0.36
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 755 EPPISKIQQCYRCQKWGHSQRYCHGIIKCVKC 850
EP S + C++C GH ++ C +KC+ C
Sbjct: 292 EPDRSNL--CWKCGLSGHKKQACTNSVKCLDC 321
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 28.7 bits (61), Expect = 0.36
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 779 QCYRCQKWGHSQRYCHGIIK---CVKCA-GNHSYKKCNRNKTTEPPKCANCGSD 928
+C++C K GH C G + C+KC H ++C T C +C D
Sbjct: 329 KCFKCWKLGHKGFECTGQDRSKLCIKCGQEGHKIRECPNAMT-----CLDCRED 377
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 25.4 bits (53), Expect = 3.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 761 PISKIQQCYRCQKWGHSQRYC 823
P KI C+RC+K GH +R C
Sbjct: 198 PEKKIT-CHRCRKPGHMKRDC 217
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 25.0 bits (52), Expect = 4.4
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +2
Query: 776 QQCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEPPKCANC--GSD-HTANYK 946
++CYRC + H + C G + C K PP+C C GS+ H ++
Sbjct: 429 RRCYRCWQTDHISQDCCGPDR-RDCCLRGGEKGHFAATCRLPPRCVLCPDGSNAHHSSGA 487
Query: 947 LCP 955
CP
Sbjct: 488 FCP 490
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 24.2 bits (50), Expect = 7.7
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 776 QQCYRCQKWGHSQRYCHG 829
++C++C + GH R C G
Sbjct: 416 RRCFKCWETGHFSRDCKG 433
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 926,298
Number of Sequences: 2352
Number of extensions: 17198
Number of successful extensions: 66
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 137338992
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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