Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_B08
(1209 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 37 0.17
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 35 0.51
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 35 0.51
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 35 0.51
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 35 0.51
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 35 0.51
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 35 0.51
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 35 0.51
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 35 0.68
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 35 0.68
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 35 0.68
BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domai... 33 2.7
M64554-1|AAA51821.1| 661|Homo sapiens coagulation factor XIIIb ... 32 4.8
BC089424-1|AAH89424.2| 425|Homo sapiens zinc finger protein 789... 31 6.3
Z69744-1|CAA93625.1| 4005|Homo sapiens ALL-1 protein protein. 31 8.4
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 36.7 bits (81), Expect = 0.17
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Frame = +2
Query: 782 CYRCQKWGHSQRYC---HGIIKCVKCA-GNHSYKKCNRNKTTEPPKCANCG 922
CYRC + GH + C + C C G H K C K C NCG
Sbjct: 47 CYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCG 97
Score = 31.9 bits (69), Expect = 4.8
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 755 EPPISKIQQCYRCQKWGHSQRYC-HG-IIKCVKCAG-NHSYKKCNRNKTTEPPKCANCG- 922
EP + Q CY C K GH R C H KC C H K C + KC CG
Sbjct: 84 EPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK------VKCYRCGE 137
Query: 923 SDHTA 937
+ H A
Sbjct: 138 TGHVA 142
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 35.1 bits (77), Expect = 0.51
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 782 CYRCQKWGHSQRYCH-GIIKCVKCA-GNHSYKKCNRNKTTEPPKCANCG 922
CYRC + GH + C C C G H K C K C NCG
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCG 102
Score = 31.9 bits (69), Expect = 4.8
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 755 EPPISKIQQCYRCQKWGHSQRYC-HG-IIKCVKCAG-NHSYKKCNRNKTTEPPKCANCG- 922
EP + Q CY C K GH R C H KC C H K C + KC CG
Sbjct: 89 EPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK------VKCYRCGE 142
Query: 923 SDHTA 937
+ H A
Sbjct: 143 TGHVA 147
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 35.1 bits (77), Expect = 0.51
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 782 CYRCQKWGHSQRYCH-GIIKCVKCA-GNHSYKKCNRNKTTEPPKCANCG 922
CYRC + GH + C C C G H K C K C NCG
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCG 102
Score = 31.9 bits (69), Expect = 4.8
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 755 EPPISKIQQCYRCQKWGHSQRYC-HG-IIKCVKCAG-NHSYKKCNRNKTTEPPKCANCG- 922
EP + Q CY C K GH R C H KC C H K C + KC CG
Sbjct: 89 EPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK------VKCYRCGE 142
Query: 923 SDHTA 937
+ H A
Sbjct: 143 TGHVA 147
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 35.1 bits (77), Expect = 0.51
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 782 CYRCQKWGHSQRYCH-GIIKCVKCA-GNHSYKKCNRNKTTEPPKCANCG 922
CYRC + GH + C C C G H K C K C NCG
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCG 102
Score = 31.9 bits (69), Expect = 4.8
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 755 EPPISKIQQCYRCQKWGHSQRYC-HG-IIKCVKCAG-NHSYKKCNRNKTTEPPKCANCG- 922
EP + Q CY C K GH R C H KC C H K C + KC CG
Sbjct: 89 EPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK------VKCYRCGE 142
Query: 923 SDHTA 937
+ H A
Sbjct: 143 TGHVA 147
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 35.1 bits (77), Expect = 0.51
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 782 CYRCQKWGHSQRYCH-GIIKCVKCA-GNHSYKKCNRNKTTEPPKCANCG 922
CYRC + GH + C C C G H K C K C NCG
Sbjct: 47 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCG 95
Score = 31.9 bits (69), Expect = 4.8
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 755 EPPISKIQQCYRCQKWGHSQRYC-HG-IIKCVKCAG-NHSYKKCNRNKTTEPPKCANCG- 922
EP + Q CY C K GH R C H KC C H K C + KC CG
Sbjct: 82 EPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK------VKCYRCGE 135
Query: 923 SDHTA 937
+ H A
Sbjct: 136 TGHVA 140
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 35.1 bits (77), Expect = 0.51
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 782 CYRCQKWGHSQRYCH-GIIKCVKCA-GNHSYKKCNRNKTTEPPKCANCG 922
CYRC + GH + C C C G H K C K C NCG
Sbjct: 47 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCG 95
Score = 31.9 bits (69), Expect = 4.8
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 755 EPPISKIQQCYRCQKWGHSQRYC-HG-IIKCVKCAG-NHSYKKCNRNKTTEPPKCANCG- 922
EP + Q CY C K GH R C H KC C H K C + KC CG
Sbjct: 82 EPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK------VKCYRCGE 135
Query: 923 SDHTA 937
+ H A
Sbjct: 136 TGHVA 140
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 35.1 bits (77), Expect = 0.51
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 782 CYRCQKWGHSQRYCH-GIIKCVKCA-GNHSYKKCNRNKTTEPPKCANCG 922
CYRC + GH + C C C G H K C K C NCG
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCG 102
Score = 31.9 bits (69), Expect = 4.8
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 755 EPPISKIQQCYRCQKWGHSQRYC-HG-IIKCVKCAG-NHSYKKCNRNKTTEPPKCANCG- 922
EP + Q CY C K GH R C H KC C H K C + KC CG
Sbjct: 89 EPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK------VKCYRCGE 142
Query: 923 SDHTA 937
+ H A
Sbjct: 143 TGHVA 147
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 35.1 bits (77), Expect = 0.51
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 782 CYRCQKWGHSQRYCH-GIIKCVKCA-GNHSYKKCNRNKTTEPPKCANCG 922
CYRC + GH + C C C G H K C K C NCG
Sbjct: 44 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCG 92
Score = 31.9 bits (69), Expect = 4.8
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 755 EPPISKIQQCYRCQKWGHSQRYC-HG-IIKCVKCAG-NHSYKKCNRNKTTEPPKCANCG- 922
EP + Q CY C K GH R C H KC C H K C + KC CG
Sbjct: 79 EPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK------VKCYRCGE 132
Query: 923 SDHTA 937
+ H A
Sbjct: 133 TGHVA 137
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 34.7 bits (76), Expect = 0.68
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Frame = +2
Query: 782 CYRCQKWGHSQRYC--HGIIKCVKCA-GNHSYKKCNRNKTTEPPKCANCG 922
CYRC + GH + C C C G H K C K C NCG
Sbjct: 47 CYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCG 96
Score = 31.9 bits (69), Expect = 4.8
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 755 EPPISKIQQCYRCQKWGHSQRYC-HG-IIKCVKCAG-NHSYKKCNRNKTTEPPKCANCG- 922
EP + Q CY C K GH R C H KC C H K C + KC CG
Sbjct: 83 EPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK------VKCYRCGE 136
Query: 923 SDHTA 937
+ H A
Sbjct: 137 TGHVA 141
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 34.7 bits (76), Expect = 0.68
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Frame = +2
Query: 782 CYRCQKWGHSQRYC--HGIIKCVKCA-GNHSYKKCNRNKTTEPPKCANCG 922
CYRC + GH + C C C G H K C K C NCG
Sbjct: 54 CYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCG 103
Score = 31.9 bits (69), Expect = 4.8
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 755 EPPISKIQQCYRCQKWGHSQRYC-HG-IIKCVKCAG-NHSYKKCNRNKTTEPPKCANCG- 922
EP + Q CY C K GH R C H KC C H K C + KC CG
Sbjct: 90 EPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK------VKCYRCGE 143
Query: 923 SDHTA 937
+ H A
Sbjct: 144 TGHVA 148
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 34.7 bits (76), Expect = 0.68
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Frame = +2
Query: 782 CYRCQKWGHSQRYC--HGIIKCVKCA-GNHSYKKCNRNKTTEPPKCANCG 922
CYRC + GH + C C C G H K C K C NCG
Sbjct: 54 CYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCG 103
Score = 31.9 bits (69), Expect = 4.8
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 755 EPPISKIQQCYRCQKWGHSQRYC-HG-IIKCVKCAG-NHSYKKCNRNKTTEPPKCANCG- 922
EP + Q CY C K GH R C H KC C H K C + KC CG
Sbjct: 90 EPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK------VKCYRCGE 143
Query: 923 SDHTA 937
+ H A
Sbjct: 144 TGHVA 148
>BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domain
containing 13 protein.
Length = 166
Score = 32.7 bits (71), Expect = 2.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 770 KIQQCYRCQKWGHSQRYCHGIIKCVKC 850
K Q+CY C K GH Q+ C +KC +C
Sbjct: 108 KEQKCYSCGKLGHIQKDC-AQVKCYRC 133
>M64554-1|AAA51821.1| 661|Homo sapiens coagulation factor XIIIb
protein.
Length = 661
Score = 31.9 bits (69), Expect = 4.8
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Frame = +2
Query: 806 HSQRYCHGIIKCVKCAGNHSYK-----KCNRNKTTEPPKC 910
HS Y HG I ++C N +C K+TEPPKC
Sbjct: 288 HSTTYRHGEIVHIECELNFEIHGSAEIRCEDGKSTEPPKC 327
>BC089424-1|AAH89424.2| 425|Homo sapiens zinc finger protein 789
protein.
Length = 425
Score = 31.5 bits (68), Expect = 6.3
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 806 HSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEP--PKCANCGSDHTANYKL 949
HS H ++C K G HS C++ ++P KC+ CG N L
Sbjct: 307 HSGEKRHKCLECGKAFGRHSTLLCHQQIHSKPNTHKCSECGQSFGRNVDL 356
>Z69744-1|CAA93625.1| 4005|Homo sapiens ALL-1 protein protein.
Length = 4005
Score = 31.1 bits (67), Expect = 8.4
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +2
Query: 767 SKIQQCYRCQKWGHSQRYCHGIIKCVKCAG--NHSYKKCNRNKTTEPPKCANCGSDHTAN 940
SK+ QC +C +W HS KC +G + Y+ + + C NC H A
Sbjct: 1616 SKMMQCGKCDRWVHS--------KCENLSGTEDEMYEILSNLPESVAYTCVNCTERHPAE 1667
Query: 941 YKL 949
++L
Sbjct: 1668 WRL 1670
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,492,432
Number of Sequences: 237096
Number of extensions: 2441985
Number of successful extensions: 4921
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4891
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17064331300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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