Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_B08
(1209 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 100 8e-21
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 90 6e-18
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 90 6e-18
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 89 8e-18
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 89 1e-17
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 79 9e-15
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 79 9e-15
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 77 6e-14
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 75 2e-13
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 74 3e-13
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 73 8e-13
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 71 3e-12
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 71 3e-12
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 71 4e-12
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 70 7e-12
M38643-1|AAA28939.1| 549|Drosophila melanogaster protein ( D.me... 56 1e-07
M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic acid-b... 56 1e-07
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 43 0.001
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 39 0.016
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 35 0.19
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 35 0.19
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 35 0.19
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 34 0.45
AE014134-928|AAN10543.1| 612|Drosophila melanogaster CG31915-PA... 31 2.4
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 31 3.1
X77050-1|CAA54342.1| 260|Drosophila melanogaster gag-like polyp... 31 4.2
AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5... 29 9.6
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 99.5 bits (237), Expect = 8e-21
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Frame = +2
Query: 302 KLKQKVPVVFIHKPIEFPILQWHIKNILILSINIYDPYFSKNYVKLMCPTLNDQKLLLQY 481
+ + K P + + + ++ I+NI+ L I ++L N + ++ +
Sbjct: 122 RAQSKPPPIVMEGVDDVYLMMQSIENIVDLE-KIEARASMSGVLRLYAADANTFRTIVNW 180
Query: 482 LERKQLPYHTFGHPAKRKMKVVIRGLPNNIDLDKVKLELKSLLIPVIRVHKMHIRNYENN 661
LE ++ +H + R +V ++GL ++ ++K EL+ + V+ +H RN
Sbjct: 181 LEIEEYEFHCYQLKEDRPYRVCVKGLHHSTLHHQIKDELEKIGHKVLDIHTPLRRNEPGT 240
Query: 662 S-SSPI---LAVVPHDEEGKRILKVKKILNIDVTLEPPISK--IQQCYRCQKWGHSQRYC 823
S +SP+ + K IL VK + ++ V +EP + I QC+RCQ+ GH+ +YC
Sbjct: 241 SKASPVNMFFLNIAAAANNKEILAVKALCHMRVVIEPLRKRNAIVQCHRCQQIGHTAKYC 300
Query: 824 HGIIKCVKCAGNHSYKKCNRNKTTEPPKCANCGSDHTANYKLC 952
CVKCAG H K C R + E C NCG H ANYK C
Sbjct: 301 RKAHICVKCAGEHPAKDCTRPR-IELCTCYNCGGQHPANYKGC 342
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 89.8 bits (213), Expect = 6e-18
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 3/184 (1%)
Frame = +2
Query: 425 NYVKLMCPTLNDQKLLLQYLERKQLPYHTFGHPAKRKMKVVIRGLPNNIDLDKVKLELKS 604
N +++ T++ K + L +P H+ + + ++VIR L + ++ +L+
Sbjct: 596 NNIRIQAKTMDAYKAIQNVLLGANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQD 655
Query: 605 LLIPVIRVHKMHIRNYENNSSSPILAVVPH-DEEGKRILKVKKILNIDVTLEPP-ISKIQ 778
+ I + M R+ N + VVP D ++L +K + V +E +SK
Sbjct: 656 IGIATKFIRAMQFRDTRNPMRIHEVEVVPKADGSHLKVLLLKSLGGQTVKVERKRVSKDP 715
Query: 779 -QCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEPPKCANCGSDHTANYKLCP 955
QC+RCQ +GH++ YC KC+KC H+ C + K P CANC H ++YK CP
Sbjct: 716 TQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL-PATCANCNGSHVSSYKGCP 774
Query: 956 XYPD 967
+ +
Sbjct: 775 AFQE 778
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 89.8 bits (213), Expect = 6e-18
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 3/184 (1%)
Frame = +2
Query: 425 NYVKLMCPTLNDQKLLLQYLERKQLPYHTFGHPAKRKMKVVIRGLPNNIDLDKVKLELKS 604
N +++ T++ K + L +P H+ + + ++VIR L + ++ +L+
Sbjct: 596 NNIRIQAKTMDAYKAIQNVLLGANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQD 655
Query: 605 LLIPVIRVHKMHIRNYENNSSSPILAVVPH-DEEGKRILKVKKILNIDVTLEPP-ISKIQ 778
+ I + M R+ N + VVP D ++L +K + V +E +SK
Sbjct: 656 IGIATKFIRAMQFRDTRNPMRIHEVEVVPKADGSHLKVLLLKSLGGQTVKVERKRVSKDP 715
Query: 779 -QCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEPPKCANCGSDHTANYKLCP 955
QC+RCQ +GH++ YC KC+KC H+ C + K P CANC H ++YK CP
Sbjct: 716 TQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL-PATCANCNGSHVSSYKGCP 774
Query: 956 XYPD 967
+ +
Sbjct: 775 AFQE 778
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 89.4 bits (212), Expect = 8e-18
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 3/184 (1%)
Frame = +2
Query: 425 NYVKLMCPTLNDQKLLLQYLERKQLPYHTFGHPAKRKMKVVIRGLPNNIDLDKVKLELKS 604
N +++ T++ + L +P H+ + + ++VIR L + ++ +L+
Sbjct: 673 NNIRIQAKTMDAYNAIQNVLLEANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQD 732
Query: 605 LLIPVIRVHKMHIRNYENNSSSPILAVVPH-DEEGKRILKVKKILNIDVTLEPP-ISKIQ 778
+ I + M R+ N + VVP D ++L +K + V +E +SK
Sbjct: 733 IGIATKFIRAMQFRDTRNPMRIHEVEVVPKADGSHLKVLLIKSLGGQTVKVERKRVSKDP 792
Query: 779 -QCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEPPKCANCGSDHTANYKLCP 955
QC+RCQ +GH++ YC KC+KC H+ C + K P CANC H ++YK CP
Sbjct: 793 TQCHRCQCFGHTKNYCRNPFKCMKCGQLHASVSCTKPKNL-PATCANCNGSHVSSYKGCP 851
Query: 956 XYPD 967
+ +
Sbjct: 852 VFQE 855
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 89.0 bits (211), Expect = 1e-17
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 3/184 (1%)
Frame = +2
Query: 425 NYVKLMCPTLNDQKLLLQYLERKQLPYHTFGHPAKRKMKVVIRGLPNNIDLDKVKLELKS 604
N +++ T++ + L +P H+ + + ++VIR L + ++ +L+
Sbjct: 673 NNIRIQAKTMDAHNAIQNVLLEANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQD 732
Query: 605 LLIPVIRVHKMHIRNYENNSSSPILAVVPH-DEEGKRILKVKKILNIDVTLEPP-ISKIQ 778
+ I + M R+ N + VVP D ++L +K + V +E +SK
Sbjct: 733 IGIATKFIRAMQFRDTRNPMRIHEVEVVPKADGSHLKVLLLKSLGGQTVKVERKRVSKDP 792
Query: 779 -QCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEPPKCANCGSDHTANYKLCP 955
QC+RCQ +GH++ YC KC+KC H+ C + K P CANC H ++YK CP
Sbjct: 793 TQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL-PATCANCNGSHVSSYKGCP 851
Query: 956 XYPD 967
+ +
Sbjct: 852 AFQE 855
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 79.4 bits (187), Expect = 9e-15
Identities = 50/188 (26%), Positives = 94/188 (50%), Gaps = 9/188 (4%)
Frame = +2
Query: 431 VKLMCPTLNDQKLLLQYLERKQLPYHTFGHPAKRKMKVVIRGLPNNIDLDKVKLELKS-- 604
+KL T D +++ +YL Y+T+ + + ++VV++G+ + ++ LK+
Sbjct: 261 IKLQIQTEADHRIVTKYLNDAGKNYYTYQLKSCKGLQVVLKGIEATVTPAEIIEALKAKN 320
Query: 605 ----LLIPVIRVHKMHIRNYENNSSSPILAVVPHDEEGKRILKVKKILNIDVTLEPPISK 772
I ++ K+ ++ + A+ + E I ++ +L+ +T+E P +
Sbjct: 321 FSAKTAINILNKDKVPQPLFKIELEPELQALKKN--EVHPIYNLQYLLHRRITVEEPHKR 378
Query: 773 IQ--QCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEP-PKCANCGSDHTANY 943
I QC CQ++GH++ YC CV C+ H+ C +NK + KC+NCG HTANY
Sbjct: 379 INPVQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKNKDDKSVKKCSNCGEKHTANY 438
Query: 944 KLCPXYPD 967
+ C Y +
Sbjct: 439 RGCVVYKE 446
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 79.4 bits (187), Expect = 9e-15
Identities = 50/188 (26%), Positives = 94/188 (50%), Gaps = 9/188 (4%)
Frame = +2
Query: 431 VKLMCPTLNDQKLLLQYLERKQLPYHTFGHPAKRKMKVVIRGLPNNIDLDKVKLELKS-- 604
+KL T D +++ +YL Y+T+ + + ++VV++G+ + ++ LK+
Sbjct: 105 IKLQIQTEADHRIVTKYLNDAGKNYYTYQLKSCKGLQVVLKGIEATVTPAEIIEALKAKN 164
Query: 605 ----LLIPVIRVHKMHIRNYENNSSSPILAVVPHDEEGKRILKVKKILNIDVTLEPPISK 772
I ++ K+ ++ + A+ + E I ++ +L+ +T+E P +
Sbjct: 165 FSAKTAINILNKDKVPQPLFKIELEPELQALKKN--EVHPIYNLQYLLHRRITVEEPHKR 222
Query: 773 IQ--QCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEP-PKCANCGSDHTANY 943
I QC CQ++GH++ YC CV C+ H+ C +NK + KC+NCG HTANY
Sbjct: 223 INPVQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKNKDDKSVKKCSNCGEKHTANY 282
Query: 944 KLCPXYPD 967
+ C Y +
Sbjct: 283 RGCVVYKE 290
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 76.6 bits (180), Expect = 6e-14
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Frame = +2
Query: 689 PHDEEGKRILKVKKILNIDVTLEPPISKIQ--QCYRCQKWGHSQRYCHGIIKCVKCAGNH 862
P E I K++ +L+ +T+E P + QC CQ++GH++ YC CV C H
Sbjct: 7 PRKNEVHPIYKLQLLLHRRITVEEPHKRNAPVQCTNCQEYGHTRSYCTLAPVCVVCGDLH 66
Query: 863 SYKKCNRNKTTE-PPKCANCGSDHTANYKLCPXYPD 967
K+C NK KC NCG +HTANY+ CP Y +
Sbjct: 67 DSKQCQINKENACEKKCNNCGGNHTANYRGCPIYKE 102
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 74.9 bits (176), Expect = 2e-13
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Frame = +2
Query: 425 NYVKLMCPTLNDQKLLLQYLERKQLPYHTFGHPAKRKMKVVIRGLPNNIDLDKVKLELKS 604
N V++ + + + L LP T ++R +V+IR L ++ + EL
Sbjct: 504 NGVRIQAKDMTAYNKIKEVLVANGLPLFTNQPKSERGFRVIIRHLHHSTPCSWIVEELLK 563
Query: 605 LLIPVIRVHKMHIRNYENNSSS------PILAVVPHDEEGKRILKVKKI--LNIDVTLEP 760
L +RN N ++ + V+ D +IL +K+I +D+ +
Sbjct: 564 L-----GFQARFVRNMTNPATGGPMRMFEVEIVMAKDGSHDKILSLKQIGGQRVDIERKN 618
Query: 761 PISKIQQCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEPPKCANCGSDHTAN 940
+ QCYRCQ + H++ C +C+KCAG H C + +TT P C NC H +
Sbjct: 619 RTREPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCTKPRTT-PATCVNCSGQHISA 677
Query: 941 YKLCPXY 961
YK CP Y
Sbjct: 678 YKGCPAY 684
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 74.1 bits (174), Expect = 3e-13
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 8/187 (4%)
Frame = +2
Query: 425 NYVKLMCPTLNDQKLLLQYLERKQLPYHTFGHPAKRKMKVVIRGLPNNIDLDKVKLELKS 604
N V++ + + + L LP T ++R +V+IR L ++ + EL
Sbjct: 526 NGVRIQAKDMTAYNKIKEVLVANGLPLFTNQPKSERGFRVIIRHLHHSTPCSWIVEELLK 585
Query: 605 LLIPVIRVHKMHIRNYENNSSS------PILAVVPHDEEGKRILKVKKI--LNIDVTLEP 760
L +RN N ++ + V+ D +IL +K+I +D+ +
Sbjct: 586 L-----GFQARFVRNMTNPATGGPMRMFEVEIVMAKDGSHDKILSLKQIGGQRVDIERKN 640
Query: 761 PISKIQQCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEPPKCANCGSDHTAN 940
QCYRCQ + H++ C +C+KCAG H C + +TT P C NC H +
Sbjct: 641 RTRDPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCTKPRTT-PATCVNCSGQHISA 699
Query: 941 YKLCPXY 961
YK CP Y
Sbjct: 700 YKGCPTY 706
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 72.9 bits (171), Expect = 8e-13
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 8/187 (4%)
Frame = +2
Query: 425 NYVKLMCPTLNDQKLLLQYLERKQLPYHTFGHPAKRKMKVVIRGLPNNIDLDKVKLELKS 604
N V++ + + + L P T ++R +V+IR L ++ + EL
Sbjct: 541 NGVRIQAKDMTAYNKIKEVLTANGFPLFTNQPKSERGFRVIIRHLHHSTPCSWIVEELLK 600
Query: 605 LLIPVIRVHKMHIRNYENNSSS------PILAVVPHDEEGKRILKVKKI--LNIDVTLEP 760
L RN N ++ + V+ D +I+ +K++ +D+ +
Sbjct: 601 L-----GFQARFARNMTNPATGGPMRMFEVEIVMAKDSSHGKIISLKQLGGQRVDIERKN 655
Query: 761 PISKIQQCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEPPKCANCGSDHTAN 940
+ QCYRCQ + HS+ C +C+KCAG H C + +TT P C NC +H +
Sbjct: 656 RTREPVQCYRCQGFRHSKNSCMRPPRCMKCAGGHLSSCCTKPRTT-PATCVNCSGEHISA 714
Query: 941 YKLCPXY 961
YK CP Y
Sbjct: 715 YKGCPAY 721
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 70.9 bits (166), Expect = 3e-12
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 8/187 (4%)
Frame = +2
Query: 425 NYVKLMCPTLNDQKLLLQYLERKQLPYHTFGHPAKRKMKVVIRGLPNNIDLDKVKLELKS 604
N V++ + + + L LP T ++R +V+IR L ++ + EL
Sbjct: 119 NGVRIQAKDMTAYNKIKEVLVANGLPLFTNQPKSERGFRVIIRHLHHSTPCSWIVEELLK 178
Query: 605 LLIPVIRVHKMHIRNYENNSSS------PILAVVPHDEEGKRILKVKKI--LNIDVTLEP 760
L +RN N ++ + V+ D +IL +K+I +D+ +
Sbjct: 179 L-----GFQARFVRNMTNPATGGPMRMFEVEIVMAKDGSHDKILSLKQIGGQRVDIERKN 233
Query: 761 PISKIQQCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEPPKCANCGSDHTAN 940
+ QCYRCQ + H++ C +C+K AG H C + +TT P C NC H +
Sbjct: 234 RTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCTKPRTT-PATCVNCSGQHISA 292
Query: 941 YKLCPXY 961
YK CP Y
Sbjct: 293 YKGCPAY 299
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 70.9 bits (166), Expect = 3e-12
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 8/187 (4%)
Frame = +2
Query: 425 NYVKLMCPTLNDQKLLLQYLERKQLPYHTFGHPAKRKMKVVIRGLPNNIDLDKVKLELKS 604
N V++ + + + L LP T ++R +V+IR L ++ + EL
Sbjct: 119 NGVRIQAKDMTAYNKIKEVLVANGLPLFTNQPKSERGFRVIIRHLHHSTPCSWIVEELLK 178
Query: 605 LLIPVIRVHKMHIRNYENNSSS------PILAVVPHDEEGKRILKVKKI--LNIDVTLEP 760
L +RN N ++ + V+ D +IL +K+I +D+ +
Sbjct: 179 L-----GFQARFVRNMTNPATGGPMRMFEVEIVMAKDGSHDKILSLKQIGGQRVDIERKN 233
Query: 761 PISKIQQCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEPPKCANCGSDHTAN 940
+ QCYRCQ + H++ C +C+K AG H C + +TT P C NC H +
Sbjct: 234 RTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCTKPRTT-PATCVNCSGQHISA 292
Query: 941 YKLCPXY 961
YK CP Y
Sbjct: 293 YKGCPAY 299
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 70.5 bits (165), Expect = 4e-12
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Frame = +2
Query: 425 NYVKLMCPTLNDQKLLLQYLERKQLPYHTFGHPAKRKMKVVIRGLPNNIDLDKVKLELKS 604
N V++ + + + L P T ++R +VVIR L ++ + EL
Sbjct: 534 NGVRIQAKDMTAFNKIKEVLVANGFPLFTNQPKSERGFRVVIRHLHHSTPCSWIVEELLK 593
Query: 605 LLIPVIRVHKMHIRNYENNSSSPILAV---VPHDEEGKRILKVKKI--LNIDVTLEPPIS 769
L V M N + V + D +I+ +K+I +D+ +
Sbjct: 594 LGFQARFVRNM--TNPATGGPMRMFEVEIAMAKDGSHDKIISLKQIGGQRVDIERKNRTR 651
Query: 770 KIQQCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEPPKCANCGSDHTANYKL 949
+ QCYRCQ + H++ C +C+KCAG+H C + ++T P C NC +H + YK
Sbjct: 652 EPVQCYRCQGFRHAKNSCMKPPRCMKCAGDHLSSCCTKPRST-PATCVNCSGEHISAYKG 710
Query: 950 CPXY 961
CP Y
Sbjct: 711 CPTY 714
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 69.7 bits (163), Expect = 7e-12
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +2
Query: 779 QCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEPPKCANCGSDHTANYKLCPX 958
QC+RCQ +GH++ YC KC+KC H+ C + K P CANC H ++YK CP
Sbjct: 4 QCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL-PATCANCNGSHVSSYKGCPA 62
Query: 959 YPD 967
+ +
Sbjct: 63 FQE 65
>M38643-1|AAA28939.1| 549|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 549
Score = 56.0 bits (129), Expect = 1e-07
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +2
Query: 707 KRILKVKKILNIDVTLEPPISK--IQQCYRCQKWGHSQRYCHGIIKCVKCAGNH--SYKK 874
K LK+ ++ VT+E + + QC RCQ +GHS+ YC C KC+G H +
Sbjct: 344 KESLKITRLGRYRVTVERATRRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPHMTGFAL 403
Query: 875 CNRNKTTEPPKCANCGSDHTANYKLCP 955
C ++ C NCG DH + K CP
Sbjct: 404 C----ISDVCLCINCGGDHVSTDKSCP 426
>M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic
acid-binding protiein protein.
Length = 583
Score = 56.0 bits (129), Expect = 1e-07
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +2
Query: 707 KRILKVKKILNIDVTLEPPISK--IQQCYRCQKWGHSQRYCHGIIKCVKCAGNH--SYKK 874
K LK+ ++ VT+E + + QC RCQ +GHS+ YC C KC+G H +
Sbjct: 378 KESLKITRLGRYRVTVERATRRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPHMTGFAL 437
Query: 875 CNRNKTTEPPKCANCGSDHTANYKLCP 955
C ++ C NCG DH + K CP
Sbjct: 438 C----ISDVCLCINCGGDHVSTDKSCP 460
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 42.7 bits (96), Expect = 0.001
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Frame = +2
Query: 779 QCYRCQKWGHSQRYCHGIIK---CVKCAGNHSYKKCNRNKTTEPPKCANCGSD----HTA 937
+C+RC ++GH YC + + C++C G H +K PP+C C SD H
Sbjct: 408 RCFRCLEFGHRAPYCKSVDRSDCCLRC-GEHGHK---AKGCVAPPRCLICSSDVDKNHAT 463
Query: 938 NYKLCPXY 961
CP Y
Sbjct: 464 GGFACPTY 471
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 38.7 bits (86), Expect = 0.016
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 779 QCYRCQKWGHSQRYCHGIIKCVKC-AGNHSYKKCNRNKTTEPPKCANCGSDHTANYKLCP 955
+C CQ GH+ ++C CV C H C R CANC H A+ CP
Sbjct: 203 RCKSCQLLGHTSKHCKNPPACVSCNLAPHLPVPCTR------IFCANCTGQHPASSPECP 256
Query: 956 XY 961
Y
Sbjct: 257 QY 258
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 35.1 bits (77), Expect = 0.19
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 776 QQCYRCQKWGHSQRYC-HGIIKCVKCAG-NHSYKKCNRNKTTEPPKCANC 919
++CY+C ++GH R C +C +C G H K C + + P C C
Sbjct: 55 EKCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQ---ADNPTCYRC 101
Score = 29.5 bits (63), Expect = 9.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 782 CYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNR 883
CYRC K GH R C + + N S KCNR
Sbjct: 98 CYRCNKTGHWVRNCPEAVN-ERGPTNVSCYKCNR 130
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 35.1 bits (77), Expect = 0.19
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 776 QQCYRCQKWGHSQRYC-HGIIKCVKCAG-NHSYKKCNRNKTTEPPKCANC 919
++CY+C ++GH R C +C +C G H K C + + P C C
Sbjct: 55 EKCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQ---ADNPTCYRC 101
Score = 29.5 bits (63), Expect = 9.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 782 CYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNR 883
CYRC K GH R C + + N S KCNR
Sbjct: 98 CYRCNKTGHWVRNCPEAVN-ERGPTNVSCYKCNR 130
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 35.1 bits (77), Expect = 0.19
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 776 QQCYRCQKWGHSQRYC-HGIIKCVKCAG-NHSYKKCNRNKTTEPPKCANC 919
++CY+C ++GH R C +C +C G H K C + + P C C
Sbjct: 55 EKCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQ---ADNPTCYRC 101
Score = 29.5 bits (63), Expect = 9.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 782 CYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNR 883
CYRC K GH R C + + N S KCNR
Sbjct: 98 CYRCNKTGHWVRNCPEAVN-ERGPTNVSCYKCNR 130
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 33.9 bits (74), Expect = 0.45
Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Frame = +2
Query: 566 NIDLDKVKLELKSLLIPVIRVHKMHIRNYENNSSSPILAVVPHDE-----EGKRILKVKK 730
+ID D + ELK + ++ M +N +NS + + +V E ++ ++ +
Sbjct: 112 HIDEDTILQELKPQKVSEVK-KIMKRQNPNSNSDTNNITLVETGLIIITFESHKLPEIVR 170
Query: 731 ILNIDVTLEPPISKIQQCYRCQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRNKTTEPPKC 910
I V + I +C +C ++GH C + C+ C + + + K T C
Sbjct: 171 IGYETVRVRDYIPLPLRCKKCLRFGHPTPICKSVETCINC--SETKHTNDGEKCTNEKNC 228
Query: 911 ANCGSDHTANYKLCP 955
NC ++ +++ P
Sbjct: 229 LNCRNNPELDHQHSP 243
>AE014134-928|AAN10543.1| 612|Drosophila melanogaster CG31915-PA
protein.
Length = 612
Score = 31.5 bits (68), Expect = 2.4
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 335 HKPIEFPILQWHIKNILILSINI-YDPYFSKNYVKLMCPTLNDQKLLLQYLERKQL 499
H I +++ +K +LIL +I ++PYF +N V+++ N + L Y RK+L
Sbjct: 408 HYNIWVMMVRKQLKEVLILEDDIRFEPYFRQNAVRILNQARNAAQYDLIYFGRKRL 463
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 31.1 bits (67), Expect = 3.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 764 ISKIQQCYRCQKWGHSQRYCHGIIKCVKCAGNH 862
I K Q C C GH R C + C C G H
Sbjct: 458 IKKKQLCLNCFARGHQLRDCTSMHSCFTCKGRH 490
>X77050-1|CAA54342.1| 260|Drosophila melanogaster gag-like
polypeptide protein.
Length = 260
Score = 30.7 bits (66), Expect = 4.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 899 PPKCANCGSDHTANYKLCPXY 961
P C NC +H + YK CP Y
Sbjct: 3 PATCINCSGEHISAYKGCPVY 23
>AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5C
protein.
Length = 1081
Score = 29.5 bits (63), Expect = 9.6
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 791 CQKWGHSQRYCHGIIKCVKCAGNHSYKKCNRN 886
CQ G S+R+CH ++ + G + C N
Sbjct: 108 CQAKGQSERWCHNYVRVLHSYGENQLYACGTN 139
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,512,814
Number of Sequences: 53049
Number of extensions: 740354
Number of successful extensions: 2001
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1964
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6417528075
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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