Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B07
         (1200 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   2.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   2.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   4.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   7.9  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -3

Query: 334 ISFGNFNFKEEGPTFIRSINRTSYLAFEFSPXLIHESQFYGATNH 200
           I++ N   +     F+R +  TSYL F++      E ++Y   +H
Sbjct: 123 INYENQRTRSRIHLFVRYVFVTSYLLFDYFVQRNQEYKYYQILSH 167


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 759 KTCCNQSTLML*LSLVIFIVCPL 827
           KT C   T ++  SL IF++C L
Sbjct: 404 KTFCTLVTALVYCSLAIFVLCEL 426


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 15/53 (28%), Positives = 21/53 (39%)
 Frame = +2

Query: 416 DILKDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTAR 574
           D++KD +     L+     L+ LLS G   D       K  +    L T T R
Sbjct: 80  DVIKDNYRKVTDLKKRFPKLKVLLSVGGNADVSGQDEEKNIKYRNLLETTTRR 132


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 965 EFNSIVRFQTYLYITVNFTWTSNLS*LVIYCNYFY 861
           + NS+      L+ITV F      S +V+Y  +F+
Sbjct: 246 DHNSLYSLHLLLWITVTFILLVGDSYIVMYVFFFH 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,264
Number of Sequences: 336
Number of extensions: 5300
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34938740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)