Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_B07
(1200 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 157 2e-39
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 124 2e-29
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 121 2e-28
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 100 5e-22
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 99 1e-21
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 89 9e-19
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 89 1e-18
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 84 3e-17
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 81 4e-16
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 80 5e-16
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 70 6e-13
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 63 6e-11
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 50 8e-07
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 43 1e-04
SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomy... 31 0.32
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 29 0.97
SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces p... 29 1.3
SPBC651.03c |gyp10||GTPase activating protein Gyp10|Schizosaccha... 28 3.0
SPAC56F8.08 |mud1|ucp1, ddi1|UBA domain protein Mud1|Schizosacch... 27 5.2
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 27 5.2
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 157 bits (382), Expect = 2e-39
Identities = 70/130 (53%), Positives = 95/130 (73%)
Frame = +2
Query: 215 IKLGLVNEXWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSS 394
I++ +N+ + LKG GP TPYEGG F+++I++P YPF PPK+ F TKI+HPNVSS
Sbjct: 24 IQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSS 83
Query: 395 VTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTAR 574
TGAICLDILKDQW+ T+++ L+SLQ+LL EP++PQDA VA+ + +N + F TAR
Sbjct: 84 QTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAR 143
Query: 575 HWTNVYAGGP 604
WT+ YA P
Sbjct: 144 EWTSSYAAAP 153
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 124 bits (299), Expect = 2e-29
Identities = 57/128 (44%), Positives = 80/128 (62%)
Frame = +2
Query: 212 SIKLGLVNEXWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVS 391
S G V + + I GP D+PY GG F L I P YPF PPK+ F T+I+HPN++
Sbjct: 20 SCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNIN 79
Query: 392 SVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTA 571
S G+ICLDIL+DQW+ ALT+ VLLS+ +LL+ P+DP +A ++ + + ++A
Sbjct: 80 S-NGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSA 138
Query: 572 RHWTNVYA 595
R WT YA
Sbjct: 139 REWTRKYA 146
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 121 bits (292), Expect = 2e-28
Identities = 58/109 (53%), Positives = 72/109 (66%)
Frame = +2
Query: 269 GPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAAL 448
GP + YEGG F LE+ +P+ YP PP +RFLTKI+HPNV + G ICL LK W+ AL
Sbjct: 40 GPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKL-GRICLSTLKKDWSPAL 98
Query: 449 TLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYA 595
+RTVLLS+QAL+ A P+DP D VAK ++EN AR WT YA
Sbjct: 99 QIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYA 147
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 100 bits (239), Expect = 5e-22
Identities = 49/100 (49%), Positives = 69/100 (69%), Gaps = 2/100 (2%)
Frame = +2
Query: 257 GEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQW 436
G I GP DT YEG F + + P YP++PP I F + +WHPNV ++G ICLDILKD+W
Sbjct: 63 GTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNV-DMSGNICLDILKDKW 121
Query: 437 AAALTLRTVLLSLQALLSAGEPND--PQDAVVAKQFRENP 550
+A ++T+LLSLQ+LL GEPN+ P +A A+ + ++P
Sbjct: 122 SAVYNVQTILLSLQSLL--GEPNNASPLNAQAAELWSKDP 159
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 98.7 bits (235), Expect = 1e-21
Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +2
Query: 254 KGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQ 433
K I GP +TPYEGG ++L+I V E YP +PP + F TKI HPN+S G +C+DILK
Sbjct: 38 KAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTH 97
Query: 434 WAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPR-LFTMTARHWTNVYAGG 601
W+ A +L++ L++ +LLS + + P + AK R + + R T +YA G
Sbjct: 98 WSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKG 154
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 89.4 bits (212), Expect = 9e-19
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +2
Query: 215 IKLGLVNEXWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSS 394
I++ LV++ GP D+ Y GG F +K P YPF PP I F T+I+HPN S
Sbjct: 27 IRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDS 86
Query: 395 VTGAICLDILKDQ-WAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTA 571
G +CL ILK Q + ++ LR+VL + LL P+DP A +A+Q+R + F A
Sbjct: 87 -EGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIA 145
Query: 572 RHWTNVYA 595
R + +A
Sbjct: 146 RDYVEQFA 153
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 88.6 bits (210), Expect = 1e-18
Identities = 48/146 (32%), Positives = 78/146 (53%)
Frame = +2
Query: 137 MANXAAKRXKXXFKEXMKSEXVIGGSIKLGLVNEXWTELKGEIAGPVDTPYEGGTFLLEI 316
M+ A +R FK M+ + G + V++ I GP DTP+E GTF L +
Sbjct: 1 MSTTARRRLMRDFKR-MQQDPPAG--VSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVL 57
Query: 317 KVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAG 496
E YP PP ++F++ ++HPNV + G +CLDIL+++W+ + +L S+Q+LL+
Sbjct: 58 SFDEQYPNKPPLVKFVSTMFHPNVYA-NGELCLDILQNRWSPTYDVAAILTSIQSLLNDP 116
Query: 497 EPNDPQDAVVAKQFRENPRLFTMTAR 574
P +A A+ REN + + R
Sbjct: 117 NNASPANAEAAQLHRENKKEYVRRVR 142
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 84.2 bits (199), Expect = 3e-17
Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Frame = +2
Query: 221 LGLVNEXWT-ELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSV 397
+GLV++ E + I GP DT YEGG F + P+ YP PPK++F T+IWHPNV
Sbjct: 27 VGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHP- 85
Query: 398 TGAICLDILK-------------DQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQF 538
G +C+ IL ++W + T+L+S+ ++LS+ P + AK+F
Sbjct: 86 NGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEF 145
Query: 539 RENPRLFTMTAR 574
RENP+ F R
Sbjct: 146 RENPQEFKKRVR 157
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 80.6 bits (190), Expect = 4e-16
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Frame = +2
Query: 227 LVNEXWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGA 406
LVN+ E GP +TPY GG + + +++P YP+ P I F+ +I+HPN+ ++G+
Sbjct: 24 LVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGS 83
Query: 407 ICLDILKDQWAAALTLRTVL-LSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWT 583
+CLD++ W+ + + + L LL +DP + A P + R +
Sbjct: 84 VCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTYYAKVRDYI 143
Query: 584 NVYA 595
YA
Sbjct: 144 ARYA 147
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 80.2 bits (189), Expect = 5e-16
Identities = 35/101 (34%), Positives = 57/101 (56%)
Frame = +2
Query: 272 PVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALT 451
P + Y+GG F I++ + YP +PPK++ L KI+HPN+ + G +CL+IL+ W L
Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNI-DIEGNVCLNILRQDWNPVLN 118
Query: 452 LRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTAR 574
L ++L+ LQ L + DP + A ++P+ F R
Sbjct: 119 LNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVR 159
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 70.1 bits (164), Expect = 6e-13
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQ--W 436
I G T +EGG + L + PE YP PPK RF ++HPNV +G +CL IL ++ W
Sbjct: 45 IPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYP-SGTVCLSILNEEEGW 103
Query: 437 AAALTLRTVLLSLQALLSAGEPN 505
A+T++ +LL +Q LL +PN
Sbjct: 104 KPAITIKQILLGIQDLLD--DPN 124
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 63.3 bits (147), Expect = 6e-11
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDIL------ 424
I GP TP+EGG + +K P YP PP ++F + +HPNV G +C+ IL
Sbjct: 42 IQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYK-DGTVCISILHAPGDD 100
Query: 425 -------KDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVV--AKQFRENPRLFTMTAR 574
++W+ ++ +LLS+ ++L+ EPND A + K +RE+ + R
Sbjct: 101 PNMYESSSERWSPVQSVEKILLSVMSMLA--EPNDESGANIDACKMWREDREEYCRVVR 157
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 49.6 bits (113), Expect = 8e-07
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAA 442
I GP DTPYEGG + + P YPF PP IR +T ++ D W
Sbjct: 41 ITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITPSGRFQTNTRLCLSFSDFHPKSWNP 100
Query: 443 ALTLRTVLLSLQALLSAGE 499
+ + T+L+ L + +++ E
Sbjct: 101 SWMVSTILVGLVSFMTSDE 119
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 42.7 bits (96), Expect = 1e-04
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Frame = +2
Query: 176 KEXMKSEXVIG-GSIKLGLVNEX---WTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFN 343
+E K E +G S GL N ++ I GP + +E + L+I YP
Sbjct: 12 EELEKGEKGLGESSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDA 71
Query: 344 PPKIRFLTKIWHPNVSSVTGAI---CLDILKDQWAAALTLRTVLLSLQ 478
PP + F+++I P V TG + +D L+ W ++ TVLL L+
Sbjct: 72 PPIVTFVSRINLPGVDGETGKVNPHKIDCLR-HWKREYSMETVLLDLK 118
>SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 31.1 bits (67), Expect = 0.32
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 305 LLEIKVPETYPFNPPKIRFLTKIWHP 382
++E +PE YPFN P FL W P
Sbjct: 73 VMEFFLPEAYPFNSPPTFFLKSSWLP 98
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 29.5 bits (63), Expect = 0.97
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = -3
Query: 334 ISFGNFNFKEEGPTFIRSINRTSYLAFEFSPXLIHESQFYGATNHXFTFHXLFEXXFXTF 155
+ F G T+ ++ + L F F P L ++ +Y T H H L E TF
Sbjct: 216 VEFYEHCLNHHGNTYPENLTIPNALDFLFMPSLCYQL-YYPRTAHV-RIHYLIECALGTF 273
Query: 154 GC 149
GC
Sbjct: 274 GC 275
>SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 612
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +2
Query: 611 VHECNSKVQRMLDMGIDEHQARVALSSYDWDLERATEQLF 730
+ + ++K++ + +MG+ E A+ +L +D+E A E +F
Sbjct: 1 MEDLDTKIKTLKNMGVSESDAKDSLERCGYDVESAAEFIF 40
>SPBC651.03c |gyp10||GTPase activating protein
Gyp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 373
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 3 VLASYRESLXLSNCGLSLFHRLRSCALNVFESSKA 107
++ S R+S+ +S CGLS HR+ + + +SS A
Sbjct: 36 LMKSLRKSVWVSLCGLSCRHRMECLSRSTSQSSYA 70
>SPAC56F8.08 |mud1|ucp1, ddi1|UBA domain protein
Mud1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 623 NSKVQRMLDMGIDEHQARVALSSYDWDLERATEQL 727
NSK+ +++ MG D +A AL + + DL+ A L
Sbjct: 297 NSKIAQLVSMGFDPLEAAQALDAANGDLDVAASFL 331
>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 570
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 293 GGTFLLEIKVPETYPFNPPKIRFLT 367
G TF L I + YP NP K RFLT
Sbjct: 268 GITFFLSIFLFFYYPDNPSKARFLT 292
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,233,972
Number of Sequences: 5004
Number of extensions: 85368
Number of successful extensions: 227
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 647459150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -