Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B07
         (1200 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            29   0.36 
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    28   0.62 

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 28.7 bits (61), Expect = 0.36
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
 Frame = +3

Query: 450 HCVQFY-CRCKHYCQQVNLMIHKMLWSPN 533
           HC  FY C CK  C +     H   WS N
Sbjct: 745 HCCDFYACDCKMECPKQCTCYHDQSWSSN 773


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 27.9 bits (59), Expect = 0.62
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = -2

Query: 728 KVAQWHALSPNHM---RRELLWPDVHQYPCPAYAALCYCIRVLYLAHQHKHWSNVVP 567
           +  +W+  S + M   R ++    VHQ+P  + +AL   I VL LAH  ++ + + P
Sbjct: 392 RFGEWNMSSTHEMAIPREDIGVKSVHQHPRYSPSALLNNIAVLELAHPVQYQATIQP 448


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,064,896
Number of Sequences: 2352
Number of extensions: 21477
Number of successful extensions: 81
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 136112751
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)