Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_B07
(1200 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 219 3e-57
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 192 4e-49
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 131 8e-31
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 122 4e-28
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 118 8e-27
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 118 8e-27
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 97 2e-20
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 97 2e-20
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 86 5e-17
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 81 1e-15
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 77 2e-14
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 73 3e-13
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 71 2e-12
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 69 7e-12
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 67 3e-11
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 60 2e-09
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 60 2e-09
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 60 3e-09
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 58 2e-08
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 56 7e-08
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 50 2e-06
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 50 4e-06
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 48 2e-05
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 40 0.005
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 38 0.011
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 37 0.033
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 31 1.2
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 30 3.7
U40060-6|AAA81144.1| 268|Caenorhabditis elegans Hypothetical pr... 29 8.6
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 29 8.6
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 219 bits (535), Expect = 3e-57
Identities = 103/198 (52%), Positives = 134/198 (67%)
Frame = +2
Query: 137 MANXAAKRXKXXFKEXMKSEXVIGGSIKLGLVNEXWTELKGEIAGPVDTPYEGGTFLLEI 316
M+N A R + KE + + + I + ++NE TE+KG I GP DTPY GG F L+I
Sbjct: 1 MSNIAFNRLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDI 60
Query: 317 KVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAG 496
K+P+ YPF+PP ++F TKIWHPNVSS TG ICLDILKDQWAA+LTLRTVLLS+QAL+
Sbjct: 61 KIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVLLSIQALMCTP 120
Query: 497 EPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGGPNIVHECNSKVQRMLDMGIDEHQAR 676
EP DPQDAVVAKQ+ E P +F TA +WT +A G + V ++ DMG+ E +A
Sbjct: 121 EPKDPQDAVVAKQYMEKPAVFKATAEYWTTKFAKGAVKNAGYQALVDKLKDMGVREEEAV 180
Query: 677 VALSSYDWDLERATEQLF 730
LS +WD+ R+T +F
Sbjct: 181 SVLSCNNWDINRSTVYIF 198
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 192 bits (468), Expect = 4e-49
Identities = 100/214 (46%), Positives = 134/214 (62%), Gaps = 16/214 (7%)
Frame = +2
Query: 137 MANXAAKRXKXXFKEXMKSEXVIGGSIKLGLVNEXWTELKGEIAGPVDTPYEGGTFLLEI 316
M+N A R KE + + I + + ++KG I GP TPY GGTF +++
Sbjct: 15 MSNLALARVTRKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKV 74
Query: 317 KVPETYPFNPPKI---------------RFLTKIWHPNVSSVTGAICLDILKDQWAAALT 451
+PE YPF PPK+ +F+T+IWHPN+SS TG ICLDILKD+W A+LT
Sbjct: 75 DIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLT 134
Query: 452 LRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGGPNIVH-ECNS 628
LRTVLLSLQA+L + EP+DPQDAVVAKQF N +FT TA +WT+ +A V + N
Sbjct: 135 LRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYWTSYFANSKKDVEPDFNR 194
Query: 629 KVQRMLDMGIDEHQARVALSSYDWDLERATEQLF 730
KV R+++MGI E +A V LS +W LE+A + +F
Sbjct: 195 KVGRLIEMGIRETEAIVYLSCNNWKLEQALQFIF 228
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 131 bits (317), Expect = 8e-31
Identities = 62/111 (55%), Positives = 79/111 (71%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAA 442
IAGP D+P+ GG F LE+ +PE YP PK+RF+TKI+HPN+ + G ICLDILKD+W+
Sbjct: 40 IAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKL-GRICLDILKDKWSP 98
Query: 443 ALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYA 595
AL +RTVLLS+QALLSA P DP VA+Q++ N TA+ WT YA
Sbjct: 99 ALQIRTVLLSIQALLSAPNPEDPLATDVAEQWKTNEAEAIKTAKQWTMNYA 149
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 122 bits (295), Expect = 4e-28
Identities = 61/155 (39%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Frame = +2
Query: 251 LKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICL-DILK 427
++G I G +TPYEGG F L+IK+ E+YPF P ++F+TKIWHP+VS G ICL D+
Sbjct: 381 IQGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDN 440
Query: 428 DQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGGPN 607
W ++T+ VL+ +Q+ +S +P D + +Q N +F TA WT +AG
Sbjct: 441 GVWPVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEKTAEFWTKRFAGSRR 500
Query: 608 IVH--ECNSKVQRMLDMGIDEHQARVALSSYDWDL 706
+ EC KVQ M + +E + +ALS ++W L
Sbjct: 501 KPYNQECQQKVQLMSRVIRNEELSIIALSYHNWTL 535
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 118 bits (284), Expect = 8e-27
Identities = 54/124 (43%), Positives = 77/124 (62%)
Frame = +2
Query: 224 GLVNEXWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTG 403
G V + + I GP ++PY+GG F L I P YPF PPK+ F T+I+HPN++S G
Sbjct: 24 GPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NG 82
Query: 404 AICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWT 583
+ICLDIL+ QW+ ALT+ VLLS+ +LL P+DP +A+ ++ + + AR WT
Sbjct: 83 SICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWT 142
Query: 584 NVYA 595
YA
Sbjct: 143 QKYA 146
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 118 bits (284), Expect = 8e-27
Identities = 54/124 (43%), Positives = 77/124 (62%)
Frame = +2
Query: 224 GLVNEXWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTG 403
G V + + I GP ++PY+GG F L I P YPF PPK+ F T+I+HPN++S G
Sbjct: 24 GPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NG 82
Query: 404 AICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWT 583
+ICLDIL+ QW+ ALT+ VLLS+ +LL P+DP +A+ ++ + + AR WT
Sbjct: 83 SICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWT 142
Query: 584 NVYA 595
YA
Sbjct: 143 QKYA 146
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 97.1 bits (231), Expect = 2e-20
Identities = 41/97 (42%), Positives = 67/97 (69%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAA 442
I GP +TP+E GTF L ++ E YP PP ++F++K++HPNV + G+ICLDIL+++W+
Sbjct: 40 IFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYA-DGSICLDILQNRWSP 98
Query: 443 ALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPR 553
+ +L S+Q+LL PN P +++ A+ ++EN R
Sbjct: 99 TYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRR 135
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 97.1 bits (231), Expect = 2e-20
Identities = 41/97 (42%), Positives = 67/97 (69%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAA 442
I GP +TP+E GTF L ++ E YP PP ++F++K++HPNV + G+ICLDIL+++W+
Sbjct: 40 IFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYA-DGSICLDILQNRWSP 98
Query: 443 ALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPR 553
+ +L S+Q+LL PN P +++ A+ ++EN R
Sbjct: 99 TYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRR 135
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 85.8 bits (203), Expect = 5e-17
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = +2
Query: 269 GPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAAL 448
GP DT YE G + + + +P+ YPF P I FL KI+HPN+ +G +CLD++ W A
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALY 100
Query: 449 TLRTVL-LSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGGPNIVHECN 625
L + L LL+ DP + A+ + P + T R + +A + C+
Sbjct: 101 DLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCREYVMRFASEHRAIEGCS 160
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 81.4 bits (192), Expect = 1e-15
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +2
Query: 272 PVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDIL-KDQWAAAL 448
P PY G F + I P YPF PPK+ F TKI+HPNV G CL I+ + W A
Sbjct: 41 PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDE-EGKFCLPIVTAENWKPAT 99
Query: 449 TLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYA 595
V+++L +L++ EP+ P A VA++F+++ + F TA T +A
Sbjct: 100 KTEQVMMALLSLINEPEPSHPIRADVAEEFQKDHKKFMKTAEEHTRKHA 148
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 77.0 bits (181), Expect = 2e-14
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 2/169 (1%)
Frame = +2
Query: 227 LVNEXWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGA 406
+VNE ++ IAGP DTPYE G F +++ P+ YP P+I+F T IW+ V TG
Sbjct: 23 MVNEEDKKITFHIAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPSTGQ 82
Query: 407 ICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTN 586
+ ++ + L + L ++ L + E ++ +F TAR WT
Sbjct: 83 VHIENY-----SRLNVSEALSYIEDLFRSIEVDEEV-------------MFYKTARFWTT 124
Query: 587 VYAGGPNIVHE--CNSKVQRMLDMGIDEHQARVALSSYDWDLERATEQL 727
+AGG + + KV +++MG ++ +AL DW+L A EQL
Sbjct: 125 EFAGGRPLPDDDWQKKKVDSLIEMGFSRLESILALGGSDWNLADAAEQL 173
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 73.3 bits (172), Expect = 3e-13
Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 13/108 (12%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKD---- 430
+ GP DT YEGG F + P YP PPK++F+++IWHPN+ G +C+ IL D
Sbjct: 40 VIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDK-EGNVCISILHDPGDD 98
Query: 431 ---------QWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFREN 547
+W T+ T+LLS+ ++L+ P + AK REN
Sbjct: 99 KWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQREN 146
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 70.9 bits (166), Expect = 2e-12
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 13/107 (12%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILK----- 427
I GP T Y+GG F I+ P YP++PP ++F TK+WHPNV G +C+ IL
Sbjct: 46 IYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYE-NGDLCISILHSPIDD 104
Query: 428 --------DQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRE 544
++W ++RT+LLS+ +LL+ + P + + +R+
Sbjct: 105 PQSGELACERWNPTQSVRTILLSVISLLNEPNTSSPANVDASVMYRK 151
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 68.9 bits (161), Expect = 7e-12
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Frame = +2
Query: 137 MANXAAKRXKXXFKEXMKSEXVIGGSIKLGLVNEXWTELKGEIAGPVDTPYEGGTFLLEI 316
MA A KR +KE G I + + + E + I GP +T + G F I
Sbjct: 1 MAGYALKRLMTEYKELTTRPPE--GIIAAPIDEDNFFEWECLITGPEETCFANGVFPARI 58
Query: 317 KVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDIL-------------KDQWAAALTLR 457
P+ YP +PPK+RF I+HPN+ + G +C+ IL ++W+ ++
Sbjct: 59 TFPQDYPLSPPKMRFTCGIFHPNIYA-DGRVCISILHAPGDDPTGYELSNERWSPVQSIE 117
Query: 458 TVLLSLQALLSAGEPND--PQDAVVAKQFRENPRLFTMTA 571
+LLS+ ++L+ EPND P + AK +RE+ F A
Sbjct: 118 KILLSVVSMLA--EPNDESPANVSAAKMWREDRAQFEKIA 155
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 66.9 bits (156), Expect = 3e-11
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Frame = +2
Query: 137 MANXAAKRXKXXFKEXMKSEXVIGGSIKLGLVNEXWTELKGEIAGPVDTPYEGGTFLLEI 316
M++ A +R + +KSE G + + + K + G T Y G F+L+
Sbjct: 1 MSDAATRRLMKELAQ-LKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQF 59
Query: 317 KVPETYPFNPPKIRFL--TKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLS 490
YPFN P++ F+ T HP++ S G ICL IL D W AL++++V LS+ ++LS
Sbjct: 60 TFGPQYPFNSPEVMFVGETIPAHPHIYS-NGHICLSILSDDWTPALSVQSVCLSILSMLS 118
Query: 491 AG-EPNDP-QDAVVAKQFRENP 550
+ E P DA+ + +NP
Sbjct: 119 SSKEKKHPIDDAIYVRTCSKNP 140
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKD--QW 436
I G DT +EGG + + + + +P PPK +F ++HPNV +G +CL +L + W
Sbjct: 45 IPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYP-SGTVCLSLLDENKDW 103
Query: 437 AAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFREN 547
+++++ +L+ +Q LL+ DP A + + +N
Sbjct: 104 KPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQN 140
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKD--QW 436
I G DT +EGG + + + + +P PPK +F ++HPNV +G +CL +L + W
Sbjct: 45 IPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYP-SGTVCLSLLDENKDW 103
Query: 437 AAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFREN 547
+++++ +L+ +Q LL+ DP A + + +N
Sbjct: 104 KPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQN 140
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 60.1 bits (139), Expect = 3e-09
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Frame = +2
Query: 272 PVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILK----DQ-- 433
P + Y GG F +I VP Y PP ++ LTK+WHPN++ G+ICL IL+ DQ
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINE-DGSICLSILRQNSLDQYG 125
Query: 434 WAAALTLRTVLLSLQALLS-AGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVY 592
W L V+ L +L + + ND + A+ + +N F R + + Y
Sbjct: 126 WRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 57.6 bits (133), Expect = 2e-08
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +2
Query: 287 YEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLD-ILKDQWAAALTLRTV 463
Y+ F L + V YPF PP ++F ++HPNV VT +C +L++ W T+ V
Sbjct: 57 YKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDV 116
Query: 464 LLSLQALLSAGEPNDPQDAVVAKQFREN 547
LL+L LL+ + + P + A + N
Sbjct: 117 LLNLIVLLNEPDLSRPVNIDAAHDYIHN 144
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 55.6 bits (128), Expect = 7e-08
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 12/91 (13%)
Frame = +2
Query: 251 LKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTK-----IWHPNVSSVTGAICL 415
+K I+GP DTPY G F +I P YPF+PPK FLT ++PN+ + G ICL
Sbjct: 445 IKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYN-DGKICL 503
Query: 416 DIL-------KDQWAAALTLRTVLLSLQALL 487
IL +++W +L VL+S+Q ++
Sbjct: 504 SILGTWEGRPEEKWNPYCSLMQVLVSIQEVI 534
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGA-ICL---DILKD 430
I G TPYEGG ++ ++ P+ +PF PP I LT PN T +CL D D
Sbjct: 44 IIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLT----PNGRFQTNTRLCLSISDYHPD 99
Query: 431 QWAAALTLRTVLLSLQALLSAGEP 502
W A T+ T++ L + ++ +P
Sbjct: 100 TWNPAWTVSTIITGLMSFMNDNQP 123
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 49.6 bits (113), Expect = 4e-06
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Frame = +2
Query: 236 EXWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICL 415
+ W + GP +P+EGG + + + +P PP F T + HPNV + G+I L
Sbjct: 66 DIWCSWICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNV-DLRGSIYL 123
Query: 416 DIL-KDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTAR--HWT- 583
+L ++ W++ +L+ +L + LL+ + + ++ + AR WT
Sbjct: 124 KMLEQEHWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQRENYEAKARAYAWTV 183
Query: 584 NVYAGGPNIVHECNSKVQR 640
N A G V E NS +QR
Sbjct: 184 NPNAVGYMEVSE-NSGIQR 201
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 47.6 bits (108), Expect = 2e-05
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Frame = +2
Query: 209 GSIKLGLVNEX---WTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWH 379
G+I GL ++ T I GP TPYE + L+I+ YP PP +RF TK+
Sbjct: 24 GNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHM 83
Query: 380 PNVSSVTGAI---CLDILKDQWAAALTLRTVLLSLQALLSAGEPN 505
V+ G I L L++ W+ + ++TVL ++ + + N
Sbjct: 84 VGVNQSNGVIDKRNLTTLRN-WSNSYMIKTVLEDIRKNMMMAKEN 127
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 39.5 bits (88), Expect = 0.005
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGA-ICL---DILKD 430
+ G DTP+ GG + ++ E +P++PP I +T PN T +CL D +
Sbjct: 55 LRGSPDTPFYGGYYWGKVIFKENFPWSPPAITMIT----PNGRFQTNTRLCLSISDYHPE 110
Query: 431 QWAAALTLRTVLLSLQALLSAGEP 502
W T+ +L+ L + ++ P
Sbjct: 111 SWNPGWTVSAILIGLHSFMNENSP 134
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 38.3 bits (85), Expect = 0.011
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVS-SVTGAICLDIL---KD 430
I G + T +EGG + I P YP PP + LT PN + +CL I +
Sbjct: 45 IRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLT----PNGRFELNKKVCLSISGYHPE 100
Query: 431 QWAAALTLRTVLLSLQALL 487
W + ++RT LL+L L
Sbjct: 101 TWLPSWSIRTALLALIGFL 119
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 36.7 bits (81), Expect = 0.033
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 263 IAGPVDTPYEGGTFLLEIKV-PETYPFNPPKIRFLTKIWHPNV 388
I GPV + YEGGTF +I + P P++ F T I+HPN+
Sbjct: 68 IDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNL 110
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 458 TVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFT 562
TVLL++QA L +GE N Q + + +NP F+
Sbjct: 804 TVLLNIQATLPSGESNQTQVVIFIEDHNDNPPQFS 838
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 29.9 bits (64), Expect = 3.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 224 GLVNEXWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKI 355
G V + + I GP ++PY+GG F L I +T N ++
Sbjct: 24 GSVGDDLYHWQATIMGPPESPYQGGIFFLTITSRQTIHSNHQRL 67
>U40060-6|AAA81144.1| 268|Caenorhabditis elegans Hypothetical
protein F38B6.3 protein.
Length = 268
Score = 28.7 bits (61), Expect = 8.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 428 DQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQF 538
DQ+ A +R L L+ LL+ P DP V +QF
Sbjct: 231 DQFTVADVIRNNLNQLRTLLNGNAPIDPNSVFVFRQF 267
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 28.7 bits (61), Expect = 8.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 578 WTNVYAGGPNIVHECNSKVQRMLDM 652
W NV+ + VH C +V+R+L++
Sbjct: 5 WNNVFHQRQDFVHSCTHRVERLLEL 29
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,128,227
Number of Sequences: 27780
Number of extensions: 470694
Number of successful extensions: 1068
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3297288728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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