Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B06
         (1192 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    25   1.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   2.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   4.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   7.9  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 338 KAPEALKXFNLADAESELEVPGTP 409
           K+PE      L+D++ +L+V GTP
Sbjct: 38  KSPENHPETELSDSDCDLDVTGTP 61


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -1

Query: 667 DGVVQ-NLFQALVVSFREEEHSFGGTFG 587
           +G+V  +L++AL+      + +FGGTFG
Sbjct: 511 NGLVDYSLWKALIFQISNLQTTFGGTFG 538


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +3

Query: 474 WTTDRPP-GRRCYRTWLTHTGFYSP 545
           W T + P G+R Y TW + + F  P
Sbjct: 191 WATFQEPWGKRAYVTWYSISVFMVP 215


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1

Query: 928 SFNDDRHAGRAYGLCHR 878
           S NDD   G  YG  HR
Sbjct: 366 SINDDGTCGNGYGCEHR 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,020
Number of Sequences: 336
Number of extensions: 4937
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34630457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)