Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B06
         (1192 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72509-6|CAA96650.1|  223|Caenorhabditis elegans Hypothetical pr...   246   2e-65
AL132904-5|CAC35837.2|  406|Caenorhabditis elegans Hypothetical ...    29   4.9  
Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical pr...    29   8.5  
AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate cyc...    29   8.5  
AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical ...    29   8.5  
AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical ...    29   8.5  

>Z72509-6|CAA96650.1|  223|Caenorhabditis elegans Hypothetical
           protein F32G8.6 protein.
          Length = 223

 Score =  246 bits (603), Expect = 2e-65
 Identities = 117/160 (73%), Positives = 136/160 (85%)
 Frame = +2

Query: 494 REALLPDMANSYRLLLTGLGEDPERAGLLKTPERAAKAMLFFTKGYDQSLEEVLNNAIFD 673
           +E  L  M N+Y+ ++  +GED  R GLLKTPERAAKAM+ FTKGYD  L+E+LN A+FD
Sbjct: 36  KEDHLKSMCNAYQSIIQHVGEDINRQGLLKTPERAAKAMMAFTKGYDDQLDELLNEAVFD 95

Query: 674 EDTDEMVVVKDIEMFSMCEHHLVPFYGKVSIGYLPQGKILGLSKLARIVEIFSRRLQVQE 853
           ED DEMV+VKDIEMFS+CEHHLVPF GKV IGY+P  K+LGLSKLARIVE+FSRRLQVQE
Sbjct: 96  EDHDEMVIVKDIEMFSLCEHHLVPFMGKVHIGYIPNKKVLGLSKLARIVEMFSRRLQVQE 155

Query: 854 RLTKQIAIAVTQAVRPAGVAVVIEGVHMCMVMRGVQKINS 973
           RLTKQIA A+ QAV+P+GVAVVIE  HMCMVMRGVQKIN+
Sbjct: 156 RLTKQIATAMVQAVQPSGVAVVIEASHMCMVMRGVQKINA 195


>AL132904-5|CAC35837.2|  406|Caenorhabditis elegans Hypothetical
           protein Y111B2A.9a protein.
          Length = 406

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
 Frame = -3

Query: 512 PVTTPPWWAVCGPVPGHGGRCSSRDQAW----SKSSASLAFRALQVHFPHRPS*SXSGLL 345
           PV +PP    CG + G+  R  S  +A      +SS SL    L V FP  PS S +   
Sbjct: 106 PVCSPPPEVFCGSIVGNQMRNRSNSEAQPGLRMRSSHSLGNGGLLVFFPTSPSSSSNNSG 165

Query: 344 ELFCIYQRTSPSEE 303
            L   ++R S ++E
Sbjct: 166 HLL-QHRRESHTDE 178


>Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +2

Query: 563 ERAGLLKTPERAAKAMLFFTK--GYDQSLEEVLNNAIFDEDTDEMVVVKDIEMFSMCEHH 736
           +R+  + T ER  + ++F  K    DQS EE L  A+     +  + +  ++  S   +H
Sbjct: 172 QRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNYKIRLTHMDFISTFPYH 231

Query: 737 LV 742
           +V
Sbjct: 232 MV 233


>AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate
           cyclase-like protein protein.
          Length = 675

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +2

Query: 563 ERAGLLKTPERAAKAMLFFTK--GYDQSLEEVLNNAIFDEDTDEMVVVKDIEMFSMCEHH 736
           +R+  + T ER  + ++F  K    DQS EE L  A+     +  + +  ++  S   +H
Sbjct: 172 QRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNYKIRLTHMDFISTFPYH 231

Query: 737 LV 742
           +V
Sbjct: 232 MV 233


>AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +2

Query: 563 ERAGLLKTPERAAKAMLFFTK--GYDQSLEEVLNNAIFDEDTDEMVVVKDIEMFSMCEHH 736
           +R+  + T ER  + ++F  K    DQS EE L  A+     +  + +  ++  S   +H
Sbjct: 172 QRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNYKIRLTHMDFISTFPYH 231

Query: 737 LV 742
           +V
Sbjct: 232 MV 233


>AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical
           protein B0524.7 protein.
          Length = 576

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
 Frame = -1

Query: 325 NERALLRSXTVXXLLGYRITYGARTDATYQRRWRH-CRFRVQSFSVNGGHVXSXQMRREV 149
           ++ ALL   +   L  Y   Y  R        WRH C   ++SF  +   V   +MR E+
Sbjct: 137 DDHALLTFASFDDLKAYEEAYSLRQQDVIDEFWRHQCLKNIESFEKD--DVERAEMRHEI 194

Query: 148 *RETWLM*ERETKKRXXCDEEN 83
            +    M  ++  +    D+EN
Sbjct: 195 EKLETEMRCQKMNENAEIDQEN 216


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,698,435
Number of Sequences: 27780
Number of extensions: 476365
Number of successful extensions: 1198
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3265985354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)