Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B04
         (1158 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    30   0.11 
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    25   5.6  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   9.7  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   9.7  

>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 30.3 bits (65), Expect = 0.11
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +1

Query: 145 AKWLCIENVYQKFHRPNY-YDIGGTYY 222
           A WL I N  Q+ + P Y YDI G Y+
Sbjct: 557 ASWLAIANALQRINTPKYLYDIIGDYF 583


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 5.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 538 LYIAIAFPSPKILNLNVFDKLLTVHTF 618
           LY+A+   S K  N+ V   LLTV T+
Sbjct: 283 LYVAVTGLSTKAANVGVLFILLTVETY 309


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 9.7
 Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +3

Query: 780 CRRDCRRFEILDRIS--IYWLPXXFRKCRLCQPAN 878
           C  +C    IL+     +Y+LP  +   ++C  AN
Sbjct: 366 CELECEAKLILENCGCVLYYLPKLYEDTKICSRAN 400


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.8 bits (49), Expect = 9.7
 Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +3

Query: 780 CRRDCRRFEILDRIS--IYWLPXXFRKCRLCQPAN 878
           C  +C    IL+     +Y+LP  +   ++C  AN
Sbjct: 366 CELECEAKLILENCGCVLYYLPKLYEDTKICSRAN 400


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,023,523
Number of Sequences: 2352
Number of extensions: 20553
Number of successful extensions: 83
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 130390293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)