Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_B03
(1201 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein. 312 2e-84
BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protei... 312 2e-84
AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding prote... 312 2e-84
AL391069-25|CAO72164.1| 349|Homo sapiens selenium binding prote... 312 2e-84
U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein ... 303 8e-82
AL391069-28|CAO72166.1| 295|Homo sapiens selenium binding prote... 295 3e-79
BC032997-1|AAH32997.1| 408|Homo sapiens SELENBP1 protein protein. 267 6e-71
AK023875-1|BAB14709.1| 235|Homo sapiens protein ( Homo sapiens ... 245 2e-64
AL391069-24|CAO72163.1| 305|Homo sapiens selenium binding prote... 208 3e-53
AL391069-29|CAO72167.1| 201|Homo sapiens selenium binding prote... 158 3e-38
AL391069-26|CAO72165.1| 126|Homo sapiens selenium binding prote... 91 1e-17
>CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein.
Length = 472
Score = 312 bits (765), Expect = 2e-84
Identities = 146/291 (50%), Positives = 191/291 (65%), Gaps = 3/291 (1%)
Frame = +3
Query: 132 GXASPLXAFNNGPREXLLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTG 305
G ++PL A GPRE ++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 11 GYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLK 69
Query: 306 DELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS 485
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + +
Sbjct: 70 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHA 129
Query: 486 -FNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGEKLAKFGYD 662
+F HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A GYD
Sbjct: 130 KCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLGYD 189
Query: 663 FWYQPYHDVMVSSEWGTPKYFKSGFHAEDISDPERYGTKLNVYKWSTRELQQVIDLGSEG 842
FWYQP H+VM+S+EW P + GF+ D+ + YG+ L V+ W E+ Q + L +G
Sbjct: 190 FWYQPRHNVMISTEWAAPNVLRDGFNPADV-EAGLYGSHLYVWDWQRHEIVQTLSL-KDG 247
Query: 843 CAPLEIRFLHDPKSAQGFVGCAVQANVYRFYKTAEGTWKAXKVIDIPAKKV 995
PLEIRFLH+P +AQGFVGCA+ + + RFYK GTW KVI +P KKV
Sbjct: 248 LIPLEIRFLHNPDAAQGFVGCALSSTIQRFYKNEGGTWSVEKVIQVPPKKV 298
>BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protein 1
protein.
Length = 472
Score = 312 bits (765), Expect = 2e-84
Identities = 146/291 (50%), Positives = 191/291 (65%), Gaps = 3/291 (1%)
Frame = +3
Query: 132 GXASPLXAFNNGPREXLLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTG 305
G ++PL A GPRE ++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 11 GYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLK 69
Query: 306 DELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS 485
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + +
Sbjct: 70 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHA 129
Query: 486 -FNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGEKLAKFGYD 662
+F HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A GYD
Sbjct: 130 KCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLGYD 189
Query: 663 FWYQPYHDVMVSSEWGTPKYFKSGFHAEDISDPERYGTKLNVYKWSTRELQQVIDLGSEG 842
FWYQP H+VM+S+EW P + GF+ D+ + YG+ L V+ W E+ Q + L +G
Sbjct: 190 FWYQPRHNVMISTEWAAPNVLRDGFNPADV-EAGLYGSHLYVWDWQRHEIVQTLSL-KDG 247
Query: 843 CAPLEIRFLHDPKSAQGFVGCAVQANVYRFYKTAEGTWKAXKVIDIPAKKV 995
PLEIRFLH+P +AQGFVGCA+ + + RFYK GTW KVI +P KKV
Sbjct: 248 LIPLEIRFLHNPDAAQGFVGCALSSTIQRFYKNEGGTWSVEKVIQVPPKKV 298
>AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding protein
1 protein.
Length = 472
Score = 312 bits (765), Expect = 2e-84
Identities = 146/291 (50%), Positives = 191/291 (65%), Gaps = 3/291 (1%)
Frame = +3
Query: 132 GXASPLXAFNNGPREXLLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTG 305
G ++PL A GPRE ++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 11 GYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLK 69
Query: 306 DELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS 485
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + +
Sbjct: 70 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHA 129
Query: 486 -FNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGEKLAKFGYD 662
+F HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A GYD
Sbjct: 130 KCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLGYD 189
Query: 663 FWYQPYHDVMVSSEWGTPKYFKSGFHAEDISDPERYGTKLNVYKWSTRELQQVIDLGSEG 842
FWYQP H+VM+S+EW P + GF+ D+ + YG+ L V+ W E+ Q + L +G
Sbjct: 190 FWYQPRHNVMISTEWAAPNVLRDGFNPADV-EAGLYGSHLYVWDWQRHEIVQTLSL-KDG 247
Query: 843 CAPLEIRFLHDPKSAQGFVGCAVQANVYRFYKTAEGTWKAXKVIDIPAKKV 995
PLEIRFLH+P +AQGFVGCA+ + + RFYK GTW KVI +P KKV
Sbjct: 248 LIPLEIRFLHNPDAAQGFVGCALSSTIQRFYKNEGGTWSVEKVIQVPPKKV 298
>AL391069-25|CAO72164.1| 349|Homo sapiens selenium binding protein
1 protein.
Length = 349
Score = 312 bits (765), Expect = 2e-84
Identities = 146/291 (50%), Positives = 191/291 (65%), Gaps = 3/291 (1%)
Frame = +3
Query: 132 GXASPLXAFNNGPREXLLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTG 305
G ++PL A GPRE ++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 53 GYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLK 111
Query: 306 DELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS 485
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + +
Sbjct: 112 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHA 171
Query: 486 -FNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGEKLAKFGYD 662
+F HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A GYD
Sbjct: 172 KCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLGYD 231
Query: 663 FWYQPYHDVMVSSEWGTPKYFKSGFHAEDISDPERYGTKLNVYKWSTRELQQVIDLGSEG 842
FWYQP H+VM+S+EW P + GF+ D+ + YG+ L V+ W E+ Q + L +G
Sbjct: 232 FWYQPRHNVMISTEWAAPNVLRDGFNPADV-EAGLYGSHLYVWDWQRHEIVQTLSL-KDG 289
Query: 843 CAPLEIRFLHDPKSAQGFVGCAVQANVYRFYKTAEGTWKAXKVIDIPAKKV 995
PLEIRFLH+P +AQGFVGCA+ + + RFYK GTW KVI +P KKV
Sbjct: 290 LIPLEIRFLHNPDAAQGFVGCALSSTIQRFYKNEGGTWSVEKVIQVPPKKV 340
>U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein
protein.
Length = 472
Score = 303 bits (744), Expect = 8e-82
Identities = 145/292 (49%), Positives = 188/292 (64%), Gaps = 4/292 (1%)
Frame = +3
Query: 132 GXASPLXAFNNGPREXLLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTG 305
G ++PL A GPRE ++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 11 GYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLK 69
Query: 306 DELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS 485
DELHHSGWN SSC ++ R+ L++P L S +Y VDVG++P +LHKVI+ + +
Sbjct: 70 DELHHSGWNTYSSCFGDSTKSRNKLVLPSLISSRIYVVDVGSEPGPQKLHKVIEPKDIHA 129
Query: 486 FNCSFP--HTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGEKLAKFGY 659
C HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A GY
Sbjct: 130 -KCELACLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLGY 188
Query: 660 DFWYQPYHDVMVSSEWGTPKYFKSGFHAEDISDPERYGTKLNVYKWSTRELQQVIDLGSE 839
DFWYQP H+VM+S+EW P + GF+ D+ + YG+ L V+ W E+ Q + L +
Sbjct: 189 DFWYQPRHNVMISTEWAAPNVLRDGFNPADV-EAGLYGSHLYVWDWQRHEIVQTLSL-KD 246
Query: 840 GCAPLEIRFLHDPKSAQGFVGCAVQANVYRFYKTAEGTWKAXKVIDIPAKKV 995
G PLEIRFLH+P + QGFVGCA N+ RFYKT EGTW KVI +P KKV
Sbjct: 247 GLIPLEIRFLHNPSATQGFVGCASAPNIQRFYKTREGTWSVEKVIQVPPKKV 298
Score = 32.3 bits (70), Expect = 3.6
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 988 KKFQRWSRVGTNGLISDILYH-XTKVLYFSCWLXG 1089
KK + W G GLI+DIL + LYFS WL G
Sbjct: 296 KKVKGWLLPGVPGLITDILLSLDDRFLYFSNWLHG 330
>AL391069-28|CAO72166.1| 295|Homo sapiens selenium binding protein
1 protein.
Length = 295
Score = 295 bits (723), Expect = 3e-79
Identities = 135/259 (52%), Positives = 173/259 (66%), Gaps = 1/259 (0%)
Frame = +3
Query: 222 DYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGWNVCSSCHDNAALKRDLLIMPGLHS 401
DYLATVDVD KS Y QVIHR DELHHSGWN CSSC ++ R L++P L S
Sbjct: 26 DYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLIS 85
Query: 402 CNVYAVDVGTDPRKPRLHKVIDGSKMRS-FNCSFPHTTHCLATGEIMISTMGDENENGKG 578
+Y VDVG++PR P+LHKVI+ + + +F HT+HCLA+GE+MIS++GD NGKG
Sbjct: 86 SRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG 145
Query: 579 DFVLIDSKTLEVTGTWTKGEKLAKFGYDFWYQPYHDVMVSSEWGTPKYFKSGFHAEDISD 758
FVL+D +T EV GTW + A GYDFWYQP H+VM+S+EW P + GF+ D+ +
Sbjct: 146 GFVLLDGETFEVKGTWERPGGAAPLGYDFWYQPRHNVMISTEWAAPNVLRDGFNPADV-E 204
Query: 759 PERYGTKLNVYKWSTRELQQVIDLGSEGCAPLEIRFLHDPKSAQGFVGCAVQANVYRFYK 938
YG+ L V+ W E+ Q + L +G PLEIRFLH+P +AQGFVGCA+ + + RFYK
Sbjct: 205 AGLYGSHLYVWDWQRHEIVQTLSL-KDGLIPLEIRFLHNPDAAQGFVGCALSSTIQRFYK 263
Query: 939 TAEGTWKAXKVIDIPAKKV 995
GTW KVI +P KKV
Sbjct: 264 NEGGTWSVEKVIQVPPKKV 282
>BC032997-1|AAH32997.1| 408|Homo sapiens SELENBP1 protein protein.
Length = 408
Score = 267 bits (654), Expect = 6e-71
Identities = 118/231 (51%), Positives = 156/231 (67%), Gaps = 1/231 (0%)
Frame = +3
Query: 306 DELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS 485
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + +
Sbjct: 6 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHA 65
Query: 486 -FNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGEKLAKFGYD 662
+F HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A GYD
Sbjct: 66 KCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLGYD 125
Query: 663 FWYQPYHDVMVSSEWGTPKYFKSGFHAEDISDPERYGTKLNVYKWSTRELQQVIDLGSEG 842
FWYQP H+VM+S+EW P + GF+ D+ + YG+ L V+ W E+ Q + L +G
Sbjct: 126 FWYQPRHNVMISTEWAAPNVLRDGFNPADV-EAGLYGSHLYVWDWQRHEIVQTLSL-KDG 183
Query: 843 CAPLEIRFLHDPKSAQGFVGCAVQANVYRFYKTAEGTWKAXKVIDIPAKKV 995
PLEIRFLH+P +AQGFVGCA+ + + RFYK GTW KVI +P KKV
Sbjct: 184 LIPLEIRFLHNPDAAQGFVGCALSSTIQRFYKNEGGTWSVEKVIQVPPKKV 234
>AK023875-1|BAB14709.1| 235|Homo sapiens protein ( Homo sapiens
cDNA FLJ13813 fis, clone THYRO1000358, moderately
similar to SELENIUM-BINDING LIVER PROTEIN. ).
Length = 235
Score = 245 bits (600), Expect = 2e-64
Identities = 108/212 (50%), Positives = 145/212 (68%), Gaps = 1/212 (0%)
Frame = +3
Query: 306 DELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS 485
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + +
Sbjct: 6 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHA 65
Query: 486 -FNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGEKLAKFGYD 662
+F HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A GYD
Sbjct: 66 KCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLGYD 125
Query: 663 FWYQPYHDVMVSSEWGTPKYFKSGFHAEDISDPERYGTKLNVYKWSTRELQQVIDLGSEG 842
FWYQP H+VM+S+EW P + GF+ D+ + YG+ L V+ W E+ Q + L +G
Sbjct: 126 FWYQPRHNVMISTEWAAPNVLRDGFNPADV-EAGLYGSHLYVWDWQRHEIVQTLSL-KDG 183
Query: 843 CAPLEIRFLHDPKSAQGFVGCAVQANVYRFYK 938
PLEIRFLH+P +AQGFVGCA+ + + RFYK
Sbjct: 184 LIPLEIRFLHNPDAAQGFVGCALSSTIQRFYK 215
>AL391069-24|CAO72163.1| 305|Homo sapiens selenium binding protein
1 protein.
Length = 305
Score = 208 bits (508), Expect = 3e-53
Identities = 94/196 (47%), Positives = 127/196 (64%), Gaps = 1/196 (0%)
Frame = +3
Query: 411 YAVDVGTDPRKPRLHKVIDGSKMRS-FNCSFPHTTHCLATGEIMISTMGDENENGKGDFV 587
Y V DP+ P+ +VI+ + + +F HT+HCLA+GE+MIS++GD NGKG FV
Sbjct: 65 YLATVDVDPKSPQYCQVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFV 124
Query: 588 LIDSKTLEVTGTWTKGEKLAKFGYDFWYQPYHDVMVSSEWGTPKYFKSGFHAEDISDPER 767
L+D +T EV GTW + A GYDFWYQP H+VM+S+EW P + GF+ D+ +
Sbjct: 125 LLDGETFEVKGTWERPGGAAPLGYDFWYQPRHNVMISTEWAAPNVLRDGFNPADV-EAGL 183
Query: 768 YGTKLNVYKWSTRELQQVIDLGSEGCAPLEIRFLHDPKSAQGFVGCAVQANVYRFYKTAE 947
YG+ L V+ W E+ Q + L +G PLEIRFLH+P +AQGFVGCA+ + + RFYK
Sbjct: 184 YGSHLYVWDWQRHEIVQTLSL-KDGLIPLEIRFLHNPDAAQGFVGCALSSTIQRFYKNEG 242
Query: 948 GTWKAXKVIDIPAKKV 995
GTW KVI +P KKV
Sbjct: 243 GTWSVEKVIQVPPKKV 258
Score = 48.8 bits (111), Expect = 4e-05
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +3
Query: 132 GXASPLXAFNNGPREXLLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVI 278
G ++PL A GPRE ++Y+ C+ N + DYLATVDVD KS Y QVI
Sbjct: 33 GYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVI 82
>AL391069-29|CAO72167.1| 201|Homo sapiens selenium binding protein
1 protein.
Length = 201
Score = 158 bits (384), Expect = 3e-38
Identities = 79/158 (50%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Frame = +3
Query: 132 GXASPLXAFNNGPREXLLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTG 305
G ++PL A GPRE ++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 11 GYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLK 69
Query: 306 DELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS 485
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + +
Sbjct: 70 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHA 129
Query: 486 -FNCSFPHTTHCLATGEIMISTMGDENENGK-GDFVLI 593
+F HT+HCLA+GE+MIS++GD NGK G VL+
Sbjct: 130 KCELAFLHTSHCLASGEVMISSLGDVKGNGKDGSLVLL 167
>AL391069-26|CAO72165.1| 126|Homo sapiens selenium binding protein
1 protein.
Length = 126
Score = 90.6 bits (215), Expect = 1e-17
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Frame = +3
Query: 132 GXASPLXAFNNGPREXLLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTG 305
G ++PL A GPRE ++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 38 GYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLK 96
Query: 306 DELHHSGWNVCSSCHDNAALKRDLLIMPGL 395
DELHHSGWN CSSC ++ R L++P L
Sbjct: 97 DELHHSGWNTCSSCFGDSTKSRTKLVLPSL 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,225,003
Number of Sequences: 237096
Number of extensions: 3493324
Number of successful extensions: 6670
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6635
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16899192610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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