Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B03
         (1201 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical ...   268   5e-72
Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical pr...   124   2e-28
AF125455-2|AAP13747.2|  431|Caenorhabditis elegans Hypothetical ...    31   2.1  

>AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical
           protein Y37A1B.5 protein.
          Length = 471

 Score =  268 bits (657), Expect = 5e-72
 Identities = 135/293 (46%), Positives = 182/293 (62%), Gaps = 4/293 (1%)
 Frame = +3

Query: 132 GXASPLXAFNNGPREXLLYVVCVRPNK-NKQDYLATVDVDSKSATYGQVIHRTYTGVTGD 308
           G ASP  A   GPRE +L+V    PN  +  D + TVDV+ +S T+ QVI R      GD
Sbjct: 14  GYASPADAIK-GPREEVLFVTA--PNAADGPDAIFTVDVNPESDTFCQVISRVDVPHIGD 70

Query: 309 ELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRSF 488
           E+HH+GWN CSSCHD    KR  LI+P L+S  +Y ++V  + RK  L   I+ SK+ S 
Sbjct: 71  EVHHTGWNACSSCHDKPTEKRSHLIVPCLNSDRIYIINVENE-RKIYLEHTIEPSKLHSL 129

Query: 489 NCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGEKLAKFGYDFW 668
           N SFPHT+HCLA G IMIST+G+ N    G+F+L+D KT E  GTW   EK   F YDFW
Sbjct: 130 NLSFPHTSHCLADGNIMISTLGEANGTPSGNFLLLDGKTFEPKGTWPADEKTVPFNYDFW 189

Query: 669 YQPYHDVMVSSEWGTPKYFKSGFHAEDISDPERYGTKLNVYKWSTRELQQVIDLGSE-GC 845
           YQP  +VM+S+EWG+P + K GF+   + +   YG  +++++W +++  Q IDL    G 
Sbjct: 190 YQPRRNVMISTEWGSPNHIKKGFNPAHVGE-GLYGNSVHIFEWDSKKYLQTIDLPQPLGA 248

Query: 846 APLEIRFLHDPKSAQGFVGCAVQANVYRFYKTAEG--TWKAXKVIDIPAKKVS 998
            PLE+RFLH+P S   FVGCA+ + ++R +   E   T  A  V  IP+KKVS
Sbjct: 249 LPLEVRFLHEPTSEHAFVGCALGSGIFRIHPVEENSTTHAATLVAFIPSKKVS 301



 Score = 29.9 bits (64), Expect = 3.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 988  KKFQRWSRVGTNGLISDILYHXT-KVLYFSCWLXGXV 1095
            KK   W+      LI+DIL     + LY SCWL G +
Sbjct: 298  KKVSGWALPEMPALITDILISMDDRFLYVSCWLHGDI 334


>Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical protein
            R11G10.2 protein.
          Length = 576

 Score =  124 bits (298), Expect = 2e-28
 Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 7/286 (2%)
 Frame = +3

Query: 174  EXLLYVVCVRPNKNKQDYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGW-NVCSSCH 350
            E    V C      ++D +A VD+D  S T+  ++   +    GDE     W     S  
Sbjct: 90   ELFAIVCCPHSIGYERDKIALVDLDPTSETFCTILSEVHLTSNGDEPGRMNWAKSAESLG 149

Query: 351  DNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRSFNCSFPHTTHCLAT- 527
            +     R  +I+P ++S  +Y +    +  K  + K I   ++   + S P+    L   
Sbjct: 150  EMNKFVRRNIIVPCMNSGKIYVI--AFENEKLWIEKEIRNDELIRKDVSCPYAVRSLPLK 207

Query: 528  -GEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGEK-LAKFGYDFWYQPYHDVMVSS 701
               + +ST+GD   NGKGDF+LID +T EV     K E   + +G DF  QP H++M+SS
Sbjct: 208  GAPVHVSTLGDRFGNGKGDFILIDRRTWEVR---KKSEPTFSDYGGDFSLQPRHNLMISS 264

Query: 702  EWGTPKYFKSGFHAEDISD-PERYGTKLNVYKWSTRELQQVIDLGS-EGCAPLEIRFLHD 875
            EWG P+  + GF   ++ +  E +G +L+V++ S  +L Q I+L + +G   + ++FLH+
Sbjct: 265  EWGHPRLLRDGFMPSELENVSESFGARLHVWQISPPKLIQSINLDTCDGSLVICVKFLHN 324

Query: 876  PKSAQGFVGCAVQANVYRFY-KTAEGTWKAXKVIDIPAKKVSKMES 1010
                  F   A+ ++++  +  T    W A +V  +P  KV   +S
Sbjct: 325  ADCNHAFAISAIGSSIFHLHMNTLTKEWAADRVAHVPLLKVENWQS 370


>AF125455-2|AAP13747.2|  431|Caenorhabditis elegans Hypothetical
           protein Y48A5A.1 protein.
          Length = 431

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
 Frame = +3

Query: 444 PRLHKVIDGSKMRSFN-CSFPHTTHCLATGEIMISTMGDENENGKGD---FVLIDSKTLE 611
           P++HK    S +        P TTH    G  ++  M D  ++ +GD   F++      E
Sbjct: 79  PKMHKKEHFSNLDMITELLTPSTTHHQPHGNQLVEEMDDSEDDDEGDGSEFLVEQQPAAE 138

Query: 612 VTGTWTKGEKLAKFGYDFWYQPY 680
                + G K+ KFGY F +  +
Sbjct: 139 PEEPKSDG-KIEKFGYGFGWSKF 160


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,168,804
Number of Sequences: 27780
Number of extensions: 551931
Number of successful extensions: 1445
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3297288728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)