Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_B01
         (1280 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.22 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    28   0.51 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   8.3  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   8.3  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 29.5 bits (63), Expect = 0.22
 Identities = 27/114 (23%), Positives = 31/114 (27%), Gaps = 1/114 (0%)
 Frame = -2

Query: 1000 GGXXXXXPXXGGGXXPTPXXGXXPXXGGGXGXXPPXPXGXKXGXXPGKPPGXEXGXXXGG 821
            GG     P       P    G  P    G    PP   G +     G+PP        GG
Sbjct: 215  GGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGG 274

Query: 820  XXXGKXPGXXKXXRGLPPXXLGGXFXXXXXGGGXXGXXPAN-XPFXGXRXXGGP 662
                  P       G+P   +G         GG  G  P    P    R  G P
Sbjct: 275  PRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPPQGMRPNFYNRPMGDP 328



 Score = 27.9 bits (59), Expect = 0.67
 Identities = 20/79 (25%), Positives = 22/79 (27%), Gaps = 3/79 (3%)
 Frame = +3

Query: 714 PXXPPPXXXXKNXPPRXXGGXPRXXXKXPGXF---PXXXPPXXXPXSXPGGLPGXXPXFX 884
           P  P       N  P   G   +     PG     P   P    P   PG +PG  P   
Sbjct: 186 PPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQ 245

Query: 885 PXGXGGXFPXPPPXXGFXP 941
           P          PP  G  P
Sbjct: 246 PRPPSAQGMQRPPMMGQPP 264


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 28.3 bits (60), Expect = 0.51
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = +3

Query: 822 PPXXXPXSXPGGLPGXXPXFXPXGXGGXFPXPPPXXGFXP 941
           PP       PG +PG  P   P   G   P PPP  G  P
Sbjct: 80  PPTMNMPPRPGMIPGM-PGAPPLLMGPNGPLPPPMMGMRP 118


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +1

Query: 526 PXXXPPPXXXGPXPSGXGXGXRPPXGG 606
           P   PPP   GP PS    G   P GG
Sbjct: 582 PPAPPPPPPMGPPPSPLAGG---PLGG 605



 Score = 24.2 bits (50), Expect = 8.3
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = +1

Query: 526 PXXXPPPXXXGPXPSGXGXGXRPP 597
           P   PPP      P G   G RPP
Sbjct: 589 PPMGPPPSPLAGGPLGGPAGSRPP 612


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -1

Query: 968  GGGGPXPRXXGKXXPXGGXXEXXPXPXRXKGGXGSR 861
            GGGG      G   P     +    P + +GG GSR
Sbjct: 920  GGGGGSGGEEGSGAPKERKRKGEKKPRKSQGGGGSR 955


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 852,895
Number of Sequences: 2352
Number of extensions: 16320
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147148920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)