Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_A24
(1170 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF036494-1|ABO65080.1| 177|Homo sapiens SEC13-like 1 isoform pr... 78 5e-14
BC091506-1|AAH91506.1| 322|Homo sapiens SEC13 homolog (S. cerev... 78 5e-14
BC002634-1|AAH02634.2| 325|Homo sapiens SEC13 homolog (S. cerev... 78 5e-14
AK223019-1|BAD96739.1| 322|Homo sapiens SEC13-like 1 isoform b ... 78 5e-14
AB209554-1|BAD92791.1| 303|Homo sapiens SEC13-like 1 isoform b ... 78 5e-14
BC006167-1|AAH06167.1| 264|Homo sapiens SEC13 protein protein. 69 2e-11
>EF036494-1|ABO65080.1| 177|Homo sapiens SEC13-like 1 isoform
protein.
Length = 177
Score = 78.2 bits (184), Expect = 5e-14
Identities = 51/154 (33%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Frame = +2
Query: 146 HEDMINDAEXDYYGLKXAXMXXX*XTENIXN*XWYRXIGC*YEGS*MXPCGK*LGLIPSM 325
HEDMI+DA+ DYYG + A + + + G P + P
Sbjct: 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGH-EGPVWQVAWAHPMY 70
Query: 326 GTYXRHXSYXRKVIIWKX-SGKXXKQX*XXGXEXXXNSXAWEXGEYXLILXCCXSHGXIS 502
G SY RKVIIW+ +G K G + NS W +Y LIL C S G IS
Sbjct: 71 GNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130
Query: 503 IIQYSXDXGNWXVKKIXGAHAIDVNXISXVTSXI 604
++ Y+ + G W VKKI AH I N +S + +
Sbjct: 131 LLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVV 163
Score = 36.3 bits (80), Expect = 0.21
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 286 GPVWKVARAHPKYGNLXAS 342
GPVW+VA AHP YGN+ AS
Sbjct: 58 GPVWQVAWAHPMYGNILAS 76
>BC091506-1|AAH91506.1| 322|Homo sapiens SEC13 homolog (S.
cerevisiae) protein.
Length = 322
Score = 78.2 bits (184), Expect = 5e-14
Identities = 51/154 (33%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Frame = +2
Query: 146 HEDMINDAEXDYYGLKXAXMXXX*XTENIXN*XWYRXIGC*YEGS*MXPCGK*LGLIPSM 325
HEDMI+DA+ DYYG + A + + + G P + P
Sbjct: 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGH-EGPVWQVAWAHPMY 70
Query: 326 GTYXRHXSYXRKVIIWKX-SGKXXKQX*XXGXEXXXNSXAWEXGEYXLILXCCXSHGXIS 502
G SY RKVIIW+ +G K G + NS W +Y LIL C S G IS
Sbjct: 71 GNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130
Query: 503 IIQYSXDXGNWXVKKIXGAHAIDVNXISXVTSXI 604
++ Y+ + G W VKKI AH I N +S + +
Sbjct: 131 LLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVV 163
Score = 36.3 bits (80), Expect = 0.21
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 286 GPVWKVARAHPKYGNLXAS 342
GPVW+VA AHP YGN+ AS
Sbjct: 58 GPVWQVAWAHPMYGNILAS 76
Score = 34.3 bits (75), Expect = 0.86
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 660 NGXCDNXIXIXRXQXD-KWVEXXRL*XYXDWXXXXXWXXSLG 782
+G CDN I + + + D +W E +L + DW W S+G
Sbjct: 184 SGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG 225
>BC002634-1|AAH02634.2| 325|Homo sapiens SEC13 homolog (S.
cerevisiae) protein.
Length = 325
Score = 78.2 bits (184), Expect = 5e-14
Identities = 51/154 (33%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Frame = +2
Query: 146 HEDMINDAEXDYYGLKXAXMXXX*XTENIXN*XWYRXIGC*YEGS*MXPCGK*LGLIPSM 325
HEDMI+DA+ DYYG + A + + + G P + P
Sbjct: 15 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGH-EGPVWQVAWAHPMY 73
Query: 326 GTYXRHXSYXRKVIIWKX-SGKXXKQX*XXGXEXXXNSXAWEXGEYXLILXCCXSHGXIS 502
G SY RKVIIW+ +G K G + NS W +Y LIL C S G IS
Sbjct: 74 GNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 133
Query: 503 IIQYSXDXGNWXVKKIXGAHAIDVNXISXVTSXI 604
++ Y+ + G W VKKI AH I N +S + +
Sbjct: 134 LLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVV 166
Score = 36.3 bits (80), Expect = 0.21
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 286 GPVWKVARAHPKYGNLXAS 342
GPVW+VA AHP YGN+ AS
Sbjct: 61 GPVWQVAWAHPMYGNILAS 79
Score = 34.3 bits (75), Expect = 0.86
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 660 NGXCDNXIXIXRXQXD-KWVEXXRL*XYXDWXXXXXWXXSLG 782
+G CDN I + + + D +W E +L + DW W S+G
Sbjct: 187 SGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG 228
>AK223019-1|BAD96739.1| 322|Homo sapiens SEC13-like 1 isoform b
variant protein.
Length = 322
Score = 78.2 bits (184), Expect = 5e-14
Identities = 51/154 (33%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Frame = +2
Query: 146 HEDMINDAEXDYYGLKXAXMXXX*XTENIXN*XWYRXIGC*YEGS*MXPCGK*LGLIPSM 325
HEDMI+DA+ DYYG + A + + + G P + P
Sbjct: 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGH-EGPVWQVAWAHPMY 70
Query: 326 GTYXRHXSYXRKVIIWKX-SGKXXKQX*XXGXEXXXNSXAWEXGEYXLILXCCXSHGXIS 502
G SY RKVIIW+ +G K G + NS W +Y LIL C S G IS
Sbjct: 71 GNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130
Query: 503 IIQYSXDXGNWXVKKIXGAHAIDVNXISXVTSXI 604
++ Y+ + G W VKKI AH I N +S + +
Sbjct: 131 LLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVV 163
Score = 36.3 bits (80), Expect = 0.21
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 286 GPVWKVARAHPKYGNLXAS 342
GPVW+VA AHP YGN+ AS
Sbjct: 58 GPVWQVAWAHPMYGNILAS 76
Score = 34.3 bits (75), Expect = 0.86
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 660 NGXCDNXIXIXRXQXD-KWVEXXRL*XYXDWXXXXXWXXSLG 782
+G CDN I + + + D +W E +L + DW W S+G
Sbjct: 184 SGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG 225
>AB209554-1|BAD92791.1| 303|Homo sapiens SEC13-like 1 isoform b
variant protein.
Length = 303
Score = 78.2 bits (184), Expect = 5e-14
Identities = 51/154 (33%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Frame = +2
Query: 146 HEDMINDAEXDYYGLKXAXMXXX*XTENIXN*XWYRXIGC*YEGS*MXPCGK*LGLIPSM 325
HEDMI+DA+ DYYG + A + + + G P + P
Sbjct: 6 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGH-EGPVWQVAWAHPMY 64
Query: 326 GTYXRHXSYXRKVIIWKX-SGKXXKQX*XXGXEXXXNSXAWEXGEYXLILXCCXSHGXIS 502
G SY RKVIIW+ +G K G + NS W +Y LIL C S G IS
Sbjct: 65 GNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 124
Query: 503 IIQYSXDXGNWXVKKIXGAHAIDVNXISXVTSXI 604
++ Y+ + G W VKKI AH I N +S + +
Sbjct: 125 LLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVV 157
Score = 36.3 bits (80), Expect = 0.21
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 286 GPVWKVARAHPKYGNLXAS 342
GPVW+VA AHP YGN+ AS
Sbjct: 52 GPVWQVAWAHPMYGNILAS 70
Score = 34.3 bits (75), Expect = 0.86
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 660 NGXCDNXIXIXRXQXD-KWVEXXRL*XYXDWXXXXXWXXSLG 782
+G CDN I + + + D +W E +L + DW W S+G
Sbjct: 178 SGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG 219
>BC006167-1|AAH06167.1| 264|Homo sapiens SEC13 protein protein.
Length = 264
Score = 69.3 bits (162), Expect = 2e-11
Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +2
Query: 317 PSMGTYXRHXSYXRKVIIWKX-SGKXXKQX*XXGXEXXXNSXAWEXGEYXLILXCCXSHG 493
P G SY RKVIIW+ +G K G + NS W +Y LIL C S G
Sbjct: 10 PMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG 69
Query: 494 XISIIQYSXDXGNWXVKKIXGAHAIDVNXISXVTSXI 604
IS++ Y+ + G W VKKI AH I N +S + +
Sbjct: 70 AISLLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVV 105
Score = 34.3 bits (75), Expect = 0.86
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 660 NGXCDNXIXIXRXQXD-KWVEXXRL*XYXDWXXXXXWXXSLG 782
+G CDN I + + + D +W E +L + DW W S+G
Sbjct: 126 SGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG 167
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 289 PVWKVARAHPKYGNLXAS 342
PVW+VA AHP YGN+ AS
Sbjct: 1 PVWQVAWAHPMYGNILAS 18
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,891,933
Number of Sequences: 237096
Number of extensions: 563206
Number of successful extensions: 417
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16348730310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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