Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_A24
         (1170 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160909-1|AAD46849.2|  386|Drosophila melanogaster LD03471p pro...    65   2e-10
AE014297-3318|AAF56128.1|  356|Drosophila melanogaster CG6773-PA...    65   2e-10

>AF160909-1|AAD46849.2|  386|Drosophila melanogaster LD03471p
           protein.
          Length = 386

 Score = 64.9 bits (151), Expect = 2e-10
 Identities = 46/149 (30%), Positives = 63/149 (42%), Gaps = 2/149 (1%)
 Frame = +2

Query: 146 HEDMINDAEXDYYGLKXAXMXXX*XTENIXN*XWYRXIGC*YEGS*MXPCGK*LGLIPSM 325
           HEDM++ A  D+YGL  A       +  I +           +G    P  +     P  
Sbjct: 42  HEDMVHHAALDFYGLLLATCSSD-GSVRIFHSRKNNKALAELKGH-QGPVWQVAWAHPKF 99

Query: 326 GTYXRHXSYXRKVIIWKXSGKXX--KQX*XXGXEXXXNSXAWEXGEYXLILXCCXSHGXI 499
           G      SY RKVI+WK +      K       +   NS  +   EY L+L C  S G +
Sbjct: 100 GNILASCSYDRKVIVWKSTTPRDWTKLYEYSNHDSSVNSVDFAPSEYGLVLACASSDGSV 159

Query: 500 SIIQYSXDXGNWXVKKIXGAHAIDVNXIS 586
           S++  + + G W  KKI  AH I VN IS
Sbjct: 160 SVLTCNTEYGVWDAKKIPNAHTIGVNAIS 188



 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +3

Query: 654 LXNGXCDNXIXIXRXQXDKWVEXXRL*XYXDWXXXXXWXXSLG 782
           L +G CDN + I R   D+WVE  RL  + DW     W  S+G
Sbjct: 213 LVSGGCDNLVKIWREDNDRWVEEHRLEAHSDWVRDVAWAPSIG 255



 Score = 37.1 bits (82), Expect = 0.046
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +1

Query: 286 GPVWKVARAHPKYGNLXAS 342
           GPVW+VA AHPK+GN+ AS
Sbjct: 87  GPVWQVAWAHPKFGNILAS 105


>AE014297-3318|AAF56128.1|  356|Drosophila melanogaster CG6773-PA
           protein.
          Length = 356

 Score = 64.9 bits (151), Expect = 2e-10
 Identities = 46/149 (30%), Positives = 63/149 (42%), Gaps = 2/149 (1%)
 Frame = +2

Query: 146 HEDMINDAEXDYYGLKXAXMXXX*XTENIXN*XWYRXIGC*YEGS*MXPCGK*LGLIPSM 325
           HEDM++ A  D+YGL  A       +  I +           +G    P  +     P  
Sbjct: 12  HEDMVHHAALDFYGLLLATCSSD-GSVRIFHSRKNNKALAELKGH-QGPVWQVAWAHPKF 69

Query: 326 GTYXRHXSYXRKVIIWKXSGKXX--KQX*XXGXEXXXNSXAWEXGEYXLILXCCXSHGXI 499
           G      SY RKVI+WK +      K       +   NS  +   EY L+L C  S G +
Sbjct: 70  GNILASCSYDRKVIVWKSTTPRDWTKLYEYSNHDSSVNSVDFAPSEYGLVLACASSDGSV 129

Query: 500 SIIQYSXDXGNWXVKKIXGAHAIDVNXIS 586
           S++  + + G W  KKI  AH I VN IS
Sbjct: 130 SVLTCNTEYGVWDAKKIPNAHTIGVNAIS 158



 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +3

Query: 654 LXNGXCDNXIXIXRXQXDKWVEXXRL*XYXDWXXXXXWXXSLG 782
           L +G CDN + I R   D+WVE  RL  + DW     W  S+G
Sbjct: 183 LVSGGCDNLVKIWREDNDRWVEEHRLEAHSDWVRDVAWAPSIG 225



 Score = 37.1 bits (82), Expect = 0.046
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +1

Query: 286 GPVWKVARAHPKYGNLXAS 342
           GPVW+VA AHPK+GN+ AS
Sbjct: 57  GPVWQVAWAHPKFGNILAS 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,055,283
Number of Sequences: 53049
Number of extensions: 163804
Number of successful extensions: 361
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6189124662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)