Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_A23
         (1399 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    33   0.54 
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886...    32   0.94 
03_01_0515 - 3864796-3865425                                           31   1.6  
07_01_0862 - 7172083-7172931                                           31   2.2  
04_03_0904 + 20717005-20718087                                         31   2.2  
08_01_0059 - 394001-394708                                             29   6.6  
07_01_0479 + 3606663-3607448                                           29   6.6  
11_06_0610 - 25449085-25453284                                         29   8.7  

>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
            3308247-3308315,3308427-3308513,3308753-3308858,
            3309118-3309237,3309327-3309406,3309497-3309878,
            3310746-3310814,3311460-3312202
          Length = 644

 Score = 33.1 bits (72), Expect = 0.54
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = +2

Query: 1133 PGPGXGFFXTXXPXRXPPXXSPXPKXXXPXTXSXTPPXPXKAHKPXPPXQNXRA 1294
            P P  G   +  P   PP  SP P    P     T P P +A    PP +  ++
Sbjct: 95   PPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPPPPREQQS 148


>03_05_1153 + 30787574-30787608,30787982-30788089,30788651-30788689,
            30789181-30789184,30789496-30789580,30789609-30790321
          Length = 327

 Score = 32.3 bits (70), Expect = 0.94
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 1181 PPXXSPXPKXXXPXTXSXTPPXPXKAHKPXPP 1276
            PP  +P P+   P      PP P +  KP PP
Sbjct: 174  PPPPAPEPEPEPPKKEEPQPPPPKEEEKPEPP 205


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 15/48 (31%), Positives = 17/48 (35%)
 Frame = +2

Query: 1133 PGPGXGFFXTXXPXRXPPXXSPXPKXXXPXTXSXTPPXPXKAHKPXPP 1276
            P P      +  P   PP   P      P   S  PP P K+  P PP
Sbjct: 73   PPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPP 120


>07_01_0862 - 7172083-7172931
          Length = 282

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +2

Query: 1169 PXRXPPXXSPXPKXXXPXTXSXTPPXPXKAHKPXPP 1276
            P   PP   P  K   P +    PP P K + P PP
Sbjct: 169  PLLYPPPLPPKKKPLPPPSPPPQPPLPEKENTPLPP 204


>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 15/48 (31%), Positives = 16/48 (33%)
 Frame = +2

Query: 1133 PGPGXGFFXTXXPXRXPPXXSPXPKXXXPXTXSXTPPXPXKAHKPXPP 1276
            P P    +        PP   P PK   P T    PP      KP PP
Sbjct: 211  PTPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQPKPNPP 258



 Score = 29.9 bits (64), Expect = 5.0
 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = +2

Query: 1169 PXRXPPXXSPXPKXXX-PXTXSXTPPXPXKAHKPXPP 1276
            P   PP   P PK    P T + TPP      KP PP
Sbjct: 119  PKPTPPTYKPQPKPTPAPYTPTPTPPTYKPQPKPTPP 155


>08_01_0059 - 394001-394708
          Length = 235

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = +2

Query: 1169 PXRXPPXXSPXPKXXXPXTXSXTPPXPXKAHKPXPP 1276
            P   PP  +P P    P      PP P    +P PP
Sbjct: 2    PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPP 37


>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
 Frame = +2

Query: 1133 PGPGXGFFXTXXPXRXPPXXSPX-PKXXXPXTXSXTPPXPXKAHKPXPP 1276
            P P  G F    P   PP   P  P    P      PP P +   P PP
Sbjct: 201  PPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPP 249


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = +2

Query: 1184 PXXSPXPKXXXPXTX--SXTPPXPXKAHKPXPPXQNXRASXS 1303
            P  SP P+   P T   S +PP   + H P PP     A  S
Sbjct: 545  PESSPPPEGKSPPTPTASHSPPPVPEGHTPSPPKSGPPAGES 586


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,104,883
Number of Sequences: 37544
Number of extensions: 227144
Number of successful extensions: 892
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4408801040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)