Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_A23
         (1399 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    32   1.6  
AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA...    31   5.0  
AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p pro...    30   6.6  
AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA...    30   6.6  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
            protein.
          Length = 926

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 38/172 (22%), Positives = 42/172 (24%), Gaps = 1/172 (0%)
 Frame = +2

Query: 764  RPXXTQPXGXAXPHXXXPXPXGNSXWXLXXXNPKPRXXXASHPPL*XPDXTPAXXPXXXX 943
            RP  T+P     P    P P   +   L    P PR    + PP   P   P        
Sbjct: 245  RPPTTRPPATYLPPTNKPLPPVTTR--LPPPPPSPRTPPPTRPPTRPPTTRPPATYLPPT 302

Query: 944  NRRXXXXRXEXSPLQPNQPXXXEXXAXXXPKKXXGXPXGPXXPXXEHFLXNXXXXXPXX* 1123
            N+          P  P  P           K     P     P             P   
Sbjct: 303  NKPLPPVTTRLPP--PPPPPRTPPPTRPPTKPPTTRPPATYLPPTNKPPPPVTTRRPTPP 360

Query: 1124 GAXPGPGXGFFXTXXPXRXPPXXSPXPKXXXPXTXSXTP-PXPXKAHKPXPP 1276
               P P      T  P   PP   P P      T   TP P P     P  P
Sbjct: 361  PTRPPPPPTRASTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTPPPTKPPTRP 412



 Score = 31.1 bits (67), Expect = 3.8
 Identities = 23/93 (24%), Positives = 26/93 (27%), Gaps = 1/93 (1%)
 Frame = +3

Query: 1020 PTXXP-RNXXAXPXALXXXXXNISXQTVXSXXPXXKXPPRAXXXVSFXRXXRXXXPPXSR 1196
            PT  P R     P A      N     V +  P    PPR               PP + 
Sbjct: 282  PTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTKPPTTRPPATY 341

Query: 1197 RXPNXXSPXPXPXXRXGPXRXTNPXPPXKTXAP 1295
              P    P P    R  P     P PP +   P
Sbjct: 342  LPPTNKPPPPVTTRRPTPPPTRPPPPPTRASTP 374


>AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA
            protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +2

Query: 1181 PPXXSPXPKXXXPXTXSXTPPXPXKAHKPXPPXQ 1282
            PP  +P  K   P T +  PP P    K  PP Q
Sbjct: 548  PPPTAPPQKYLPPVTTTQAPPPPPPTSKYLPPPQ 581



 Score = 30.7 bits (66), Expect = 5.0
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +2

Query: 1181 PPXXSPXPKXXXPXTXSXTPPXPXKAHKPXPPXQ 1282
            PP  +P  K   P T +  PP P    K  PP Q
Sbjct: 596  PPPTAPPQKYLPPVTTTQAPPPPPPTSKYLPPPQ 629


>AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p protein.
          Length = 993

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 15/47 (31%), Positives = 17/47 (36%)
 Frame = +2

Query: 1133 PGPGXGFFXTXXPXRXPPXXSPXPKXXXPXTXSXTPPXPXKAHKPXP 1273
            P P  G      P   PP   P P+   P T    PP     H+P P
Sbjct: 134  PAPQYGPPPQPAPQYGPPPPKPAPQYGPPPTQYGPPPPLKIQHRPAP 180


>AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA
            protein.
          Length = 993

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 15/47 (31%), Positives = 17/47 (36%)
 Frame = +2

Query: 1133 PGPGXGFFXTXXPXRXPPXXSPXPKXXXPXTXSXTPPXPXKAHKPXP 1273
            P P  G      P   PP   P P+   P T    PP     H+P P
Sbjct: 134  PAPQYGPPPQPAPQYGPPPPKPAPQYGPPPTQYGPPPPLKIQHRPAP 180


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,055,787
Number of Sequences: 53049
Number of extensions: 355236
Number of successful extensions: 981
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 7660661112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)