Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_A20
         (1222 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64837-2|AAB04836.3|  213|Caenorhabditis elegans Hypothetical pr...    30   3.8  
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   6.7  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   6.7  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      29   6.7  
L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    29   8.8  
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    29   8.8  
AL032626-10|CAA21531.1|  458|Caenorhabditis elegans Hypothetical...    29   8.8  
AF039716-2|AAB96737.1|  462|Caenorhabditis elegans Hypothetical ...    29   8.8  

>U64837-2|AAB04836.3|  213|Caenorhabditis elegans Hypothetical
           protein T27E4.5 protein.
          Length = 213

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 36/172 (20%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
 Frame = +2

Query: 173 NAPRTMLKTKSLXVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGALDEVFKKYCD---K 343
           ++PRT+     L ++A  R+   C +  +D N+  T +EE +PN  +  + K   +   +
Sbjct: 23  SSPRTL--KLCLYLKAIRRSTAECDQVTLD-NL--TSVEENQPNSTMSPLAKIIANIEKR 77

Query: 344 SAQLKGCISSVLQGVR-PCVGNEYANHINDAQNSTNQLIDFVCYKDGDRIALFIAEGGPE 520
           + ++K        GV  P   +   +     +        + C  +        A   PE
Sbjct: 78  NEKVKMTKKFKKFGVPLPMCSSNLESGYKQCRMDITCSSGYSCENNSKTRCCMEANHSPE 137

Query: 521 CFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEEC 676
             ++KTE  KTC   L+ ++   +++     V+ C K D+   C+  ++++C
Sbjct: 138 -IERKTEEFKTCPSQLQMAYFCQKTSTARKTVKPC-KTDQ--DCMFSNVQKC 185


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 419 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 514
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 419 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 514
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 419 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 514
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +1

Query: 118 AAGVLADDFSQITAVVTSQCTKNNAEDKVP 207
           AAG+    +SQI A V  QCTK  A  K P
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP 35


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +1

Query: 118 AAGVLADDFSQITAVVTSQCTKNNAEDKVP 207
           AAG+    +SQI A V  QCTK  A  K P
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP 35


>AL032626-10|CAA21531.1|  458|Caenorhabditis elegans Hypothetical
           protein Y37D8A.12a protein.
          Length = 458

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = +2

Query: 518 ECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEECSTPTPAN 697
           E  ++K   L T   NL    P ++ A  L + EK  K    T    K      TP   +
Sbjct: 374 ESSKRKAPKLSTDLTNL---VPLLQQAQMLPVTEKATKEKLQTP---KQSPMPGTPENTS 427

Query: 698 MAESLIKFMRKDSPCHTALPK 760
           +  SLIK  +K+S    A P+
Sbjct: 428 LPPSLIKKKKKESTSEQAAPE 448


>AF039716-2|AAB96737.1|  462|Caenorhabditis elegans Hypothetical
           protein W03G9.3 protein.
          Length = 462

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = +2

Query: 518 ECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEECSTPTPAN 697
           E  ++K   L T   NL    P ++ A  L + EK  K    T    K      TP   +
Sbjct: 378 ESSKRKAPKLSTDLTNL---VPLLQQAQMLPVTEKATKEKLQTP---KQSPMPGTPENTS 431

Query: 698 MAESLIKFMRKDSPCHTALPK 760
           +  SLIK  +K+S    A P+
Sbjct: 432 LPPSLIKKKKKESTSEQAAPE 452


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,062,099
Number of Sequences: 27780
Number of extensions: 382900
Number of successful extensions: 1092
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3370329934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)