Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_A19
(1187 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 215 4e-56
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 215 4e-56
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 215 4e-56
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 215 4e-56
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 215 4e-56
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 215 4e-56
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 214 9e-56
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 213 3e-55
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 208 4e-54
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 2e-47
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 2e-47
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 5e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 2e-45
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 177 2e-44
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 122 4e-28
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 106 3e-23
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 86 5e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 66 3e-11
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 42 6e-04
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 38 0.018
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 34 0.23
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 3.7
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 3.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical protein
T04C12.6 protein.
Length = 376
Score = 215 bits (526), Expect = 4e-56
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +2
Query: 701 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 880
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 881 SKRGILTLKYPIEHGIVTNWDDMEKIXHHTFYNELXVAPEE 1003
SKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL VAPEE
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 996 PKKNPVLXTEXPLNPKA 1046
P+++PVL TE PLNPKA
Sbjct: 99 PEEHPVLLTEAPLNPKA 115
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical protein
T04C12.4 protein.
Length = 376
Score = 215 bits (526), Expect = 4e-56
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +2
Query: 701 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 880
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 881 SKRGILTLKYPIEHGIVTNWDDMEKIXHHTFYNELXVAPEE 1003
SKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL VAPEE
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 996 PKKNPVLXTEXPLNPKA 1046
P+++PVL TE PLNPKA
Sbjct: 99 PEEHPVLLTEAPLNPKA 115
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 215 bits (526), Expect = 4e-56
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +2
Query: 701 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 880
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 881 SKRGILTLKYPIEHGIVTNWDDMEKIXHHTFYNELXVAPEE 1003
SKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL VAPEE
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 996 PKKNPVLXTEXPLNPKA 1046
P+++PVL TE PLNPKA
Sbjct: 99 PEEHPVLLTEAPLNPKA 115
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 215 bits (526), Expect = 4e-56
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +2
Query: 701 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 880
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 881 SKRGILTLKYPIEHGIVTNWDDMEKIXHHTFYNELXVAPEE 1003
SKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL VAPEE
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 996 PKKNPVLXTEXPLNPKA 1046
P+++PVL TE PLNPKA
Sbjct: 99 PEEHPVLLTEAPLNPKA 115
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 215 bits (526), Expect = 4e-56
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +2
Query: 701 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 880
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 881 SKRGILTLKYPIEHGIVTNWDDMEKIXHHTFYNELXVAPEE 1003
SKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL VAPEE
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 996 PKKNPVLXTEXPLNPKA 1046
P+++PVL TE PLNPKA
Sbjct: 99 PEEHPVLLTEAPLNPKA 115
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 215 bits (526), Expect = 4e-56
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +2
Query: 701 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 880
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 881 SKRGILTLKYPIEHGIVTNWDDMEKIXHHTFYNELXVAPEE 1003
SKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL VAPEE
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 996 PKKNPVLXTEXPLNPKA 1046
P+++PVL TE PLNPKA
Sbjct: 99 PEEHPVLLTEAPLNPKA 115
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical protein
T04C12.5 protein.
Length = 376
Score = 214 bits (523), Expect = 9e-56
Identities = 97/101 (96%), Positives = 99/101 (98%)
Frame = +2
Query: 701 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 880
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 881 SKRGILTLKYPIEHGIVTNWDDMEKIXHHTFYNELXVAPEE 1003
SKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL VAPEE
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 996 PKKNPVLXTEXPLNPKA 1046
P+++PVL TE PLNPKA
Sbjct: 99 PEEHPVLLTEAPLNPKA 115
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 213 bits (519), Expect = 3e-55
Identities = 95/101 (94%), Positives = 99/101 (98%)
Frame = +2
Query: 701 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 880
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 881 SKRGILTLKYPIEHGIVTNWDDMEKIXHHTFYNELXVAPEE 1003
SKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL VAPEE
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 996 PKKNPVLXTEXPLNPKA 1046
P+++PVL TE PLNPKA
Sbjct: 99 PEEHPVLLTEAPLNPKA 115
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical protein
T25C8.2 protein.
Length = 375
Score = 208 bits (509), Expect = 4e-54
Identities = 94/99 (94%), Positives = 97/99 (97%)
Frame = +2
Query: 707 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 886
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 887 RGILTLKYPIEHGIVTNWDDMEKIXHHTFYNELXVAPEE 1003
RGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL +APEE
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEE 100
Score = 29.5 bits (63), Expect = 4.9
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 996 PKKNPVLXTEXPLNPKA 1046
P+++PVL TE PLNPK+
Sbjct: 98 PEEHPVLLTEAPLNPKS 114
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 2e-47
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 701 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 880
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 881 SKRGILTLKYPIEHGIVTNWDDMEKI 958
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 2e-47
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 701 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 880
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 881 SKRGILTLKYPIEHGIVTNWDDMEKI 958
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 5e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +2
Query: 701 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 880
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 881 SKRGILTLKYPIEHGIVTNWDDMEKI 958
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 2e-45
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 701 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 880
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 881 SKRGILTLKYPIEHGIVTNWDDM 949
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 177 bits (430), Expect = 2e-44
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = +2
Query: 755 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 934
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 935 NWDDMEKIXHHTFYNELXVAPEE 1003
NWDDMEKI HHTFYNEL VAPEE
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEE 87
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 996 PKKNPVLXTEXPLNPKA 1046
P+++PVL TE PLNPKA
Sbjct: 85 PEEHPVLLTEAPLNPKA 101
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 122 bits (295), Expect = 4e-28
Identities = 55/57 (96%), Positives = 55/57 (96%)
Frame = +2
Query: 833 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIXHHTFYNELXVAPEE 1003
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL VAPEE
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 57
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 996 PKKNPVLXTEXPLNPKA 1046
P+++PVL TE PLNPKA
Sbjct: 55 PEEHPVLLTEAPLNPKA 71
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 106 bits (255), Expect = 3e-23
Identities = 46/94 (48%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Frame = +2
Query: 725 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 904
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 905 KYPIEHGIVTNWDDMEKIXHHTF-YNELXVAPEE 1003
+YP+EHGIV NW DMEKI + F ++L + PEE
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEE 104
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical protein
K07C5.1 protein.
Length = 395
Score = 85.8 bits (203), Expect = 5e-17
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Frame = +2
Query: 725 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 898
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 899 TLKYPIEHGIVTNWDDMEKIXHHTFYNE-LXVAPEE 1003
+ YP+++GIV NWDDM + HTF E L + P+E
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKE 104
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 66.5 bits (155), Expect = 3e-11
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Frame = +2
Query: 701 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 844
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 845 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIXHHTFYNELXVAPEE 1003
D ++GDEA S T+KYPI HGIV +WD ME+ + L PE+
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPED 114
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 42.3 bits (95), Expect = 6e-04
Identities = 26/86 (30%), Positives = 42/86 (48%)
Frame = +2
Query: 716 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 895
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 896 LTLKYPIEHGIVTNWDDMEKIXHHTF 973
++ PIE G V NWD ++I TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 42.3 bits (95), Expect = 6e-04
Identities = 26/86 (30%), Positives = 42/86 (48%)
Frame = +2
Query: 716 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 895
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 896 LTLKYPIEHGIVTNWDDMEKIXHHTF 973
++ PIE G V NWD ++I TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 37.5 bits (83), Expect = 0.018
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 17/115 (14%)
Frame = +2
Query: 710 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD--EAQS 883
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 884 KR------GILTLKYP---------IEHGIVTNWDDMEKIXHHTFYNELXVAPEE 1003
KR G + P ++ G++ +W+ EKI H++ N L P E
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSE 123
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.9 bits (74), Expect = 0.23
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = -3
Query: 1011 PGFSSGATXSSL*KV*CXIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESFCPIPTI 832
P + G++ S++ V I + ++ T+ S PL++ +SS S TI
Sbjct: 426 PSSTLGSSSSTI--VSTTITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTI 483
Query: 831 TP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 706
TP +G+PT N S+P P + STT A +++S
Sbjct: 484 TPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 887 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 732
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 887 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 732
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,067,727
Number of Sequences: 27780
Number of extensions: 444391
Number of successful extensions: 1145
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3255550896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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