Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_A17
(1197 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 43 5e-04
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 41 0.002
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.075
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.075
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.099
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 35 0.099
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 35 0.13
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 34 0.17
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 31 0.26
Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical pr... 33 0.30
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 33 0.30
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.30
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 33 0.53
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.53
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 33 0.53
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 32 0.70
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 31 1.2
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 1.2
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.2
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 31 1.2
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 31 1.2
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 1.2
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical pr... 31 1.6
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 1.6
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 31 1.6
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 31 1.6
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 31 1.6
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 31 1.6
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 31 1.6
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 31 1.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 1.6
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 31 2.1
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 31 2.1
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.8
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 2.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.8
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 3.7
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 3.7
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 3.7
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 3.7
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 3.7
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 30 3.7
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 3.7
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 3.7
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 3.7
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 30 3.7
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 30 3.7
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 3.7
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.9
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 29 4.9
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 4.9
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 4.9
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 29 4.9
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.5
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 6.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.5
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 6.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.5
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 29 6.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 6.5
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 29 8.6
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 8.6
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 29 8.6
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 42.7 bits (96), Expect = 5e-04
Identities = 43/169 (25%), Positives = 50/169 (29%), Gaps = 3/169 (1%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKG 584
PG +G S P P PG G P K + P K P
Sbjct: 94 PGAQGPPGTPGSAGRPGKPGAPGLNGN-----PGRPPKEPCEPLTPPPCKPCPEGPPGPA 148
Query: 585 XXPKKGXXXG-FXPKAPPP*KXXKKSTPNXXXAXPXGX--KKTPXXPPXNPPXAXXFPXP 755
P G P PP + N A P G K P PP P P
Sbjct: 149 GPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGKPGPAGPPGENGNNGE-PQP 207
Query: 756 AXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPG 902
G+P G+ G P + S GG G G +P R PG
Sbjct: 208 GAPGEPGQPGQPGQRGPAGEPGKDGSPGGQGEKGASGEPGQPGRDGQPG 256
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 41.1 bits (92), Expect = 0.002
Identities = 42/169 (24%), Positives = 50/169 (29%), Gaps = 3/169 (1%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKG 584
PG +G P P PG G P K I P K P
Sbjct: 92 PGAQGPPGTPGRAGRPGKPGAPGLNGN-----PGRPPKEPCEPITPPPCKPCPEGPPGPA 146
Query: 585 XXP-KKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGX--KKTPXXPPXNPPXAXXFPXP 755
P +G P PP + + N A P G K P PP P P
Sbjct: 147 GPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKPGPAGPPGENGRNGE-PQP 205
Query: 756 AXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPG 902
G+P G G P + + GG G G +P R PG
Sbjct: 206 GSPGEPGRPGQPGSRGPAGQPGKDGAQGGPGEKGANGEPGQPGRDGQPG 254
Score = 36.7 bits (81), Expect = 0.032
Identities = 26/95 (27%), Positives = 29/95 (30%)
Frame = +3
Query: 621 PKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKG 800
P PPP K + P K P PP P G P P GK
Sbjct: 129 PITPPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKP 188
Query: 801 GXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPGA 905
G P G PQ G +P R PG+
Sbjct: 189 GPAGPP----GENGRNGEPQPGSPGEPGRPGQPGS 219
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.075
Identities = 22/73 (30%), Positives = 25/73 (34%)
Frame = +1
Query: 748 PXLPXTENLXPFPPXXRGXLXXXPXXXFXXGGXGXPPXXGXXQNPPVXPXRGP*PGKXGL 927
P +P T + P PP P G PP PP GP PG G+
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP-PGMGGM 333
Query: 928 XPPPXKKXFXPXG 966
PPP P G
Sbjct: 334 PPPPPPGMRYPGG 346
Score = 32.7 bits (71), Expect = 0.53
Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 5/96 (5%)
Frame = +3
Query: 612 GFXPKAPPP*KXXK-KSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSP 788
G P+ PPP P G P PP PP F P G P P P
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP--PPPPSRFGPPGMGGMPPPPPP 339
Query: 789 XGK--GGXXXXPXRXVSXGGXG--XPPQXGLXAKPP 884
+ GG P G G PP PP
Sbjct: 340 GMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.075
Identities = 22/73 (30%), Positives = 25/73 (34%)
Frame = +1
Query: 748 PXLPXTENLXPFPPXXRGXLXXXPXXXFXXGGXGXPPXXGXXQNPPVXPXRGP*PGKXGL 927
P +P T + P PP P G PP PP GP PG G+
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP-PGMGGM 343
Query: 928 XPPPXKKXFXPXG 966
PPP P G
Sbjct: 344 PPPPPPGMRYPGG 356
Score = 32.7 bits (71), Expect = 0.53
Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 5/96 (5%)
Frame = +3
Query: 612 GFXPKAPPP*KXXK-KSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSP 788
G P+ PPP P G P PP PP F P G P P P
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP--PPPPSRFGPPGMGGMPPPPPP 349
Query: 789 XGK--GGXXXXPXRXVSXGGXG--XPPQXGLXAKPP 884
+ GG P G G PP PP
Sbjct: 350 GMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.1 bits (77), Expect = 0.099
Identities = 40/156 (25%), Positives = 48/156 (30%), Gaps = 5/156 (3%)
Frame = +3
Query: 534 IXXNPXKKXXTKXPQK-GXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPX 710
I P ++ PQ+ G P G + APP + + P A G P
Sbjct: 277 ISSTPVQQQGFAPPQQFGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQ 336
Query: 711 XPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQ---XGLXAKP 881
PP P F P P SP GG P + G PPQ G A P
Sbjct: 337 GPPQGGPPQGSFGAPPPQQFHAP-SPQSFGG--PPPPVSSAPGNFAPPPQSGPPGAFAPP 393
Query: 882 P-R*XXPGALTGXXXFXXPPRKKKXXPXXXXPLXXG 986
P P G + PP P P G
Sbjct: 394 PSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGG 429
Score = 32.7 bits (71), Expect = 0.53
Identities = 34/121 (28%), Positives = 40/121 (33%), Gaps = 17/121 (14%)
Frame = +3
Query: 573 PQKGXX-PKKGXXXGFXPK----APPP*KXXKKSTPNXXXAXPXGXKKTPXX---PPXNP 728
PQ+G P +G G P+ APPP + S P P P PP +
Sbjct: 327 PQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAPS-PQSFGGPPPPVSSAPGNFAPPPQSG 385
Query: 729 PXAXXFPXPAXXGKPX---------PXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKP 881
P P P+ G P P P G G GG G PP G A
Sbjct: 386 PPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYG 445
Query: 882 P 884
P
Sbjct: 446 P 446
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 35.1 bits (77), Expect = 0.099
Identities = 36/154 (23%), Positives = 47/154 (30%), Gaps = 3/154 (1%)
Frame = +3
Query: 450 PXXPXXPGXXGGGXGFX-PXXGGKXVTXKIXXNPXKKXXTKXPQKGXXPKKGXXXGFXPK 626
P P G G G G P + +I P + T P G P G
Sbjct: 103 PGTPGKDGEPGQGPGEPGPPGPDAELHDRILPVPPQCPCTAAPGLGGPPGPPGQDGIPGN 162
Query: 627 APPP*KXXKKSTPNXXX-AXPXGXKKTPXXP-PXNPPXAXXFPXPAXXGKPXPXSPXGKG 800
P + + P + P G P P PP P P P P G+
Sbjct: 163 ---PGRNGEDGAPGPQGPSGPPGPPGQPGQPGQRGPPGEPGALLPGGDAPPGPSGPPGRP 219
Query: 801 GXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPG 902
G P + S G G G+ +P + PG
Sbjct: 220 GAPGQPGKAGSPGQDGSNGDAGVAGEPGQRGPPG 253
Score = 29.5 bits (63), Expect = 4.9
Identities = 41/170 (24%), Positives = 48/170 (28%), Gaps = 3/170 (1%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKG 584
PG G P P P G G P G+ I NP + P
Sbjct: 119 PGPPGPDAELHDRILPVPPQCPCTAAPGLGGPPGPPGQD---GIPGNPGRNGEDGAP--- 172
Query: 585 XXPKKGXXXGFXPKAPP--P*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPX-P 755
G P PP P + ++ P A G P P PP P P
Sbjct: 173 -----GPQGPSGPPGPPGQPGQPGQRGPPGEPGALLPGGDAPPG--PSGPPGRPGAPGQP 225
Query: 756 AXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPGA 905
G P G G P + G G P Q G P PG+
Sbjct: 226 GKAGSPGQDGSNGDAGVAGEPGQR---GPPGPPGQAGTPGSPGDAGSPGS 272
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 34.7 bits (76), Expect = 0.13
Identities = 40/170 (23%), Positives = 47/170 (27%), Gaps = 4/170 (2%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKG 584
PG G P P PG G G P + +T P P
Sbjct: 103 PGAAGSVGAAGRPGTPGRPGAPGAPGH-PGKPPQSPCEPLTPP----PCPACPPGPPGAP 157
Query: 585 XXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXP----PXNPPXAXXFPX 752
P K G P PP P G P P P PP P
Sbjct: 158 GAPGKPGSEG--PPGPPGHDGPNGGPGQPGQPGPHGPNGHPGKPGSQGPPGPPGHSDEPK 215
Query: 753 PAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPG 902
P G+P P G G + + G G P G +P + PG
Sbjct: 216 PGQPGQPGRAGPRGPRGVAGIKGKDGAPGSPGQPGPRGGPGEPGQDGAPG 265
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 34.3 bits (75), Expect = 0.17
Identities = 42/172 (24%), Positives = 52/172 (30%), Gaps = 6/172 (3%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXP-QK 581
PG +G P P PG G G P + T P + P Q
Sbjct: 92 PGPQGPQGTPGKPGKPGKPGAPGQPGT-PGRPPQQPCEPTTPP-PCQPCPQGPPGPPGQP 149
Query: 582 GXXPKKGXXXGFXPKAPP--P*KXXKKSTPNXXXAXPX--GXKKTPXXPPXNPPXAXXFP 749
G G PK P P + K P P G P P + P P
Sbjct: 150 GIPGDNGPPGEQGPKGPDAAPGEPGPKG-PIGPPGPPGQAGAPGEPGSPAKSEPAVPGPP 208
Query: 750 XP-AXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPG 902
P G+ P P G G P + G G P + G +P + PG
Sbjct: 209 GPPGQAGQQGPPGPPGSNGIDGAPGAPGAKGEPGTPGEPGKDGEPGKPGTPG 260
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 34.3 bits (75), Expect = 0.17
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 801 PPXXRGKXGQVFRXXQGGEXXGXXGGFXGGXLGFF--XSRGXLPPXNWGWIFXKXFRGGG 628
P RG G FR +GG+ G GGF GG G + RG + G + RGGG
Sbjct: 4 PEFNRGGGGGGFRGGRGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGGF--RGGRGGG 61
Query: 627 PLG 619
G
Sbjct: 62 DRG 64
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 31.5 bits (68), Expect(2) = 0.26
Identities = 28/106 (26%), Positives = 37/106 (34%), Gaps = 5/106 (4%)
Frame = +3
Query: 576 QKGXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNP-----PXAX 740
++G + G P+ PP TP A G +T PP NP P A
Sbjct: 166 EQGPNGRPGAPGAPGPQGPPG-TAGNDGTPGQPGAP--GQVRTVPAPPGNPGQPGEPGAQ 222
Query: 741 XFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAK 878
P G+P P G G P + + G G P + G K
Sbjct: 223 G--PPGEDGRPGNSGPQGPPGPQGEPGQDGAPGNPGAPGEAGEPGK 266
Score = 21.0 bits (42), Expect(2) = 0.26
Identities = 9/26 (34%), Positives = 9/26 (34%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXG 482
PG G PP P PG G
Sbjct: 143 PGPAGNAGNPGPKGPPGQPGAPGEQG 168
>Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical
protein W07A12.5 protein.
Length = 278
Score = 33.5 bits (73), Expect = 0.30
Identities = 24/78 (30%), Positives = 25/78 (32%)
Frame = +3
Query: 633 PP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXX 812
PP K P A G T PP P P GKP P P GK G
Sbjct: 177 PPGKDGSIGAPGPDGAS--GKILTMEGPPGLPGVPGSVGLPGIPGKPGPSGPDGKIGATG 234
Query: 813 XPXRXVSXGGXGXPPQXG 866
GG G P + G
Sbjct: 235 PGGDPGKPGGNGIPGEPG 252
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 33.5 bits (73), Expect = 0.30
Identities = 42/167 (25%), Positives = 49/167 (29%), Gaps = 8/167 (4%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKG 584
PG G + P P PG G G P + +T P P
Sbjct: 107 PGPAGPAGAPGNPGRPGKPGAPGLPGN-PGKPPVQPCEPITPP-PCKPCPDGPAGPPGPP 164
Query: 585 XXPKKGXXXGFXPKAP----PP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPX 752
P G P AP PP + K P + G P P + P P
Sbjct: 165 GAPGDAGTNG-APGAPGGDAPPGEAGPKGPPGPPGSP--GAPGEPGRPGDDAPSEPLIPG 221
Query: 753 -PAXXGKPXPX---SPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKP 881
P G P P P G+ G P S G G P G KP
Sbjct: 222 EPGPQGPPGPPGQAGPDGQPGAPGGPGTPGSKGPPGNPGAPGADGKP 268
Score = 29.1 bits (62), Expect = 6.5
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Frame = +2
Query: 701 NPXXPPXKPPXXPXXSPPCXXRKTXPXFPLXXGGXXXXXXPXGFXXGVXA-TPPXGAXCK 877
NP PP +P P PPC P P G G PP A K
Sbjct: 133 NPGKPPVQP-CEPITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPK 191
Query: 878 TPPLXPTGGP 907
PP P G P
Sbjct: 192 GPP-GPPGSP 200
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.30
Identities = 37/135 (27%), Positives = 42/135 (31%), Gaps = 2/135 (1%)
Frame = +3
Query: 576 QKGXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXP--XGXKKTPXXPPXNPPXAXXFP 749
Q G K+ P PPP K + P G P PP P
Sbjct: 222 QNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 281
Query: 750 XPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPGALTGXXXFX 929
P G P P P P R G PPQ G + PP A TG
Sbjct: 282 PPPAGGSPPP--PRAGSPPPPPPPRGSPPTGSLPPPQAG-GSPPP------AGTGSP--P 330
Query: 930 XPPRKKKXXPXXXXP 974
PPR+K+ P P
Sbjct: 331 PPPRQKRQAPERSPP 345
Score = 31.5 bits (68), Expect = 1.2
Identities = 30/130 (23%), Positives = 35/130 (26%), Gaps = 3/130 (2%)
Frame = +3
Query: 408 GERGXXXXXPSXSPPXXPXXPGXX---GGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQ 578
G RG P+ SPP P G G G P G + P + P
Sbjct: 224 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Query: 579 KGXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPA 758
G P PPP + S P P P +PP A
Sbjct: 284 PAGGSPPPPRAGSPPPPPPP----RGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 339
Query: 759 XXGKPXPXSP 788
P SP
Sbjct: 340 PERSPPTGSP 349
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.30
Identities = 37/135 (27%), Positives = 42/135 (31%), Gaps = 2/135 (1%)
Frame = +3
Query: 576 QKGXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXP--XGXKKTPXXPPXNPPXAXXFP 749
Q G K+ P PPP K + P G P PP P
Sbjct: 243 QNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 302
Query: 750 XPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPGALTGXXXFX 929
P G P P P P R G PPQ G + PP A TG
Sbjct: 303 PPPAGGSPPP--PRAGSPPPPPPPRGSPPTGSLPPPQAG-GSPPP------AGTGSP--P 351
Query: 930 XPPRKKKXXPXXXXP 974
PPR+K+ P P
Sbjct: 352 PPPRQKRQAPERSPP 366
Score = 31.5 bits (68), Expect = 1.2
Identities = 30/130 (23%), Positives = 35/130 (26%), Gaps = 3/130 (2%)
Frame = +3
Query: 408 GERGXXXXXPSXSPPXXPXXPGXX---GGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQ 578
G RG P+ SPP P G G G P G + P + P
Sbjct: 245 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Query: 579 KGXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPA 758
G P PPP + S P P P +PP A
Sbjct: 305 PAGGSPPPPRAGSPPPPPPP----RGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 360
Query: 759 XXGKPXPXSP 788
P SP
Sbjct: 361 PERSPPTGSP 370
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.30
Identities = 37/135 (27%), Positives = 42/135 (31%), Gaps = 2/135 (1%)
Frame = +3
Query: 576 QKGXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXP--XGXKKTPXXPPXNPPXAXXFP 749
Q G K+ P PPP K + P G P PP P
Sbjct: 228 QNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 287
Query: 750 XPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPGALTGXXXFX 929
P G P P P P R G PPQ G + PP A TG
Sbjct: 288 PPPAGGSPPP--PRAGSPPPPPPPRGSPPTGSLPPPQAG-GSPPP------AGTGSP--P 336
Query: 930 XPPRKKKXXPXXXXP 974
PPR+K+ P P
Sbjct: 337 PPPRQKRQAPERSPP 351
Score = 31.5 bits (68), Expect = 1.2
Identities = 30/130 (23%), Positives = 35/130 (26%), Gaps = 3/130 (2%)
Frame = +3
Query: 408 GERGXXXXXPSXSPPXXPXXPGXX---GGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQ 578
G RG P+ SPP P G G G P G + P + P
Sbjct: 230 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Query: 579 KGXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPA 758
G P PPP + S P P P +PP A
Sbjct: 290 PAGGSPPPPRAGSPPPPPPP----RGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 345
Query: 759 XXGKPXPXSP 788
P SP
Sbjct: 346 PERSPPTGSP 355
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 32.7 bits (71), Expect = 0.53
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +3
Query: 753 PAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPGA 905
P G+P P P G+ G P GG G P Q G +P PGA
Sbjct: 227 PGPNGQPGPRGPPGQAGS---PGGNGQPGGPGQPGQRGSDGQPGNDGQPGA 274
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/81 (24%), Positives = 23/81 (28%)
Frame = +3
Query: 663 PNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGG 842
P P P P P A G P G GG P G
Sbjct: 139 PGKPTGLPCDPVTVPPCKPCPPGPAGEPGHDGAPGAPGKPGAPGVGGGSGAPGAPGPKGA 198
Query: 843 XGXPPQXGLXAKPPR*XXPGA 905
G P Q G +P + PG+
Sbjct: 199 PGGPGQPGRDGQPGQAGQPGS 219
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.53
Identities = 19/69 (27%), Positives = 23/69 (33%)
Frame = +3
Query: 573 PQKGXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPX 752
P P+K G P PPP + + TP P TP P PP P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPR--TPPPRSPPPRRPPMTPPSPQRRPPRTPPSPE 179
Query: 753 PAXXGKPXP 779
P + P
Sbjct: 180 PRNPPRTPP 188
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 32.7 bits (71), Expect = 0.53
Identities = 27/97 (27%), Positives = 32/97 (32%), Gaps = 2/97 (2%)
Frame = +3
Query: 621 PKAP-PP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGK 797
P AP P + T + P G P P P + P+ G P P P GK
Sbjct: 215 PGAPGPDGQPGAGGTTSTNQPGPPGPAGPPG--PAGPAGEDAYAQPSPAGTPGPPGPPGK 272
Query: 798 GGXXXXPXRXVSXGGXGXP-PQXGLXAKPPR*XXPGA 905
G + G G P P PPR GA
Sbjct: 273 DGEAGPDGPAGAPGTDGAPGPDAAYCPCPPRTLGAGA 309
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 32.3 bits (70), Expect = 0.70
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = +3
Query: 705 PXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPP 884
P PP PP P PA G+ P P G GG G G P Q PP
Sbjct: 157 PKGPP-GPPGGHGEPGPA--GRGGPRGPPGPGGPQGEAGEDGGAGNPGTPGQVRSLPSPP 213
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 31.5 bits (68), Expect = 1.2
Identities = 41/167 (24%), Positives = 43/167 (25%), Gaps = 1/167 (0%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKG 584
PG G P P PG G G P K P P
Sbjct: 111 PGVAGNPGKPGKPGKPGAPGNPGAPGKGAAV-PCEAKTPPPCKPC--PAGPPGPPGPDGP 167
Query: 585 XXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXP-PXNPPXAXXFPXPAX 761
P P AP P S P A P G P P P +P PA
Sbjct: 168 AGPAGPDGEAGSPAAPSPPGPPGPSGP----AGPAGNDGAAGTPGPDGPAGESTYPEPAA 223
Query: 762 XGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPG 902
G P P G G + G G P G P PG
Sbjct: 224 PGPAGPPGPAGPPGPDGASP-TAAPGAAGPPGPPGPAGAPGPDGNPG 269
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 2/73 (2%)
Frame = +3
Query: 690 GXKKTPXXP--PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQX 863
G P P P PP P KP P P G G P G G P Q
Sbjct: 118 GKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQD 177
Query: 864 GLXAKPPR*XXPG 902
+P PG
Sbjct: 178 AAPGEPGPKGPPG 190
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/58 (27%), Positives = 20/58 (34%)
Frame = +3
Query: 705 PXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAK 878
P PP +P P G P P G+ G P G G P + G+ K
Sbjct: 226 PQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPGPAGPPGSPGERGICPK 283
Score = 29.9 bits (64), Expect = 3.7
Identities = 21/74 (28%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Frame = +3
Query: 690 GXKKTPXXPPXNP--PXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQX 863
G P PP P P P G P P P G G P G P +
Sbjct: 124 GLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEP 183
Query: 864 GLXAKPPR*XXPGA 905
G P PGA
Sbjct: 184 GPKGPPGPPGAPGA 197
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 838 GGXGXPPXXGXXQNPPVXPXRGP*PGKXGLXPPP 939
GG G PP G PP +G PG G+ PP
Sbjct: 169 GGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPP 202
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 838 GGXGXPPXXGXXQNPPVXPXRGP*PGKXGLXPPP 939
GG G PP G PP +G PG G+ PP
Sbjct: 449 GGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPP 482
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 31.5 bits (68), Expect = 1.2
Identities = 41/162 (25%), Positives = 45/162 (27%), Gaps = 10/162 (6%)
Frame = +3
Query: 447 PPXXPXXPGXXG-GGXGFXPXXGGKXVTXKIXXNPXKKXX-TKXPQKGXXPK-----KGX 605
PP P PG G G P GK K NP K PQ P +G
Sbjct: 266 PPGAPGRPGPPGKAGANGLPGNSGKPT--KRPCNPVTKPPCVPCPQGPLGPAGPAGPQGN 323
Query: 606 XXG---FXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPX 776
G F K P G P P N P P G P
Sbjct: 324 LGGPGVFGEKGPQGPVGAPGQKGRRGEKGKDGEPGAPGAPGENVKEVPAIPGPQ--GTPG 381
Query: 777 PXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPG 902
P G G P + G G P + G +P PG
Sbjct: 382 PRGRQGPRGAPGIPGKDGLGGDQGAPGEPGADGEPGMDGVPG 423
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 31.5 bits (68), Expect = 1.2
Identities = 29/126 (23%), Positives = 33/126 (26%)
Frame = +3
Query: 417 GXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKGXXPK 596
G PS + P P P G N P P
Sbjct: 941 GPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNKPGPSGPNGPSDPNKPSPNGPSDPV 1000
Query: 597 KGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPX 776
K G P P P + P+ P G TP P N P P+ KP
Sbjct: 1001 KPSPSGPSPNGPSP-NGPSPNGPSPNGPSPNGP--TPNWPSPNGPSPNGPNGPSDPNKPG 1057
Query: 777 PXSPXG 794
P P G
Sbjct: 1058 PNGPNG 1063
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 2/73 (2%)
Frame = +3
Query: 690 GXKKTPXXP--PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQX 863
G P P P PP P KP P P G G P G G P Q
Sbjct: 118 GKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQD 177
Query: 864 GLXAKPPR*XXPG 902
+P PG
Sbjct: 178 AAPGEPGPKGPPG 190
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/58 (27%), Positives = 20/58 (34%)
Frame = +3
Query: 705 PXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAK 878
P PP +P P G P P G+ G P G G P + G+ K
Sbjct: 226 PQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPGPAGPPGSPGERGICPK 283
Score = 29.9 bits (64), Expect = 3.7
Identities = 21/74 (28%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Frame = +3
Query: 690 GXKKTPXXPPXNP--PXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQX 863
G P PP P P P G P P P G G P G P +
Sbjct: 124 GLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEP 183
Query: 864 GLXAKPPR*XXPGA 905
G P PGA
Sbjct: 184 GPKGPPGPPGAPGA 197
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Frame = +3
Query: 705 PXXPPXNPPXAXXFPXPAXXGKPXPXSPXG-KG--------GXXXXPXRXVSXGGXGXPP 857
P P P A F G P P P G KG G P + GG G P
Sbjct: 139 PDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGNPGSDGQPGAPGNNGNAGGPGAPG 198
Query: 858 QXGLXAKPPR*XXPGA 905
Q G P PGA
Sbjct: 199 QAGQDGHPGNAGAPGA 214
>Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical
protein ZK596.1 protein.
Length = 241
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = -1
Query: 756 QGGEXXGXXGGFXGGXLGFFXSRGXLPPXNWGWIFXKXFRGGGPLGKXXXXGPF 595
QGG G GGF G GF ++G P N G +GG P G G F
Sbjct: 173 QGGFPGGNQGGFGGNQGGFGGNQGGFPFGNQG-----GNQGGFPFGNPGNQGGF 221
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 31.1 bits (67), Expect = 1.6
Identities = 34/159 (21%), Positives = 39/159 (24%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKG 584
PG G P P PG G P K K P P+
Sbjct: 113 PGPPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKGL 172
Query: 585 XXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXX 764
P+ P S P P +K P P P
Sbjct: 173 PGPQGDAGTSGQDGVPGLPGPPGPSGPQGAPGVPG--EKGPTGEPGKVINGAPPGPPGPP 230
Query: 765 GKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKP 881
G P P P G G P + G G P + G P
Sbjct: 231 GPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLP 269
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Frame = +3
Query: 705 PXXPPXNPPXAXXFPXPAXXGKPXPXSPXG-KG--------GXXXXPXRXVSXGGXGXPP 857
P P P A F G P P P G KG G P + GG G P
Sbjct: 140 PDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPG 199
Query: 858 QXGLXAKPPR*XXPGA 905
Q G P PGA
Sbjct: 200 QAGQDGHPGNAGAPGA 215
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Frame = +3
Query: 705 PXXPPXNPPXAXXFPXPAXXGKPXPXSPXG-KG--------GXXXXPXRXVSXGGXGXPP 857
P P P A F G P P P G KG G P + GG G P
Sbjct: 202 PDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPG 261
Query: 858 QXGLXAKPPR*XXPGA 905
Q G P PGA
Sbjct: 262 QAGQDGHPGNAGAPGA 277
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Frame = +3
Query: 705 PXXPPXNPPXAXXFPXPAXXGKPXPXSPXG-KG--------GXXXXPXRXVSXGGXGXPP 857
P P P A F G P P P G KG G P + GG G P
Sbjct: 139 PDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPG 198
Query: 858 QXGLXAKPPR*XXPGA 905
Q G P PGA
Sbjct: 199 QAGQDGHPGNAGAPGA 214
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Frame = +3
Query: 705 PXXPPXNPPXAXXFPXPAXXGKPXPXSPXG-KG--------GXXXXPXRXVSXGGXGXPP 857
P P P A F G P P P G KG G P + GG G P
Sbjct: 139 PDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPG 198
Query: 858 QXGLXAKPPR*XXPGA 905
Q G P PGA
Sbjct: 199 QAGQDGHPGNAGAPGA 214
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Frame = +3
Query: 705 PXXPPXNPPXAXXFPXPAXXGKPXPXSPXG-KG--------GXXXXPXRXVSXGGXGXPP 857
P P P A F G P P P G KG G P + GG G P
Sbjct: 140 PDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPG 199
Query: 858 QXGLXAKPPR*XXPGA 905
Q G P PGA
Sbjct: 200 QAGQDGHPGNAGAPGA 215
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Frame = +3
Query: 705 PXXPPXNPPXAXXFPXPAXXGKPXPXSPXG-KG--------GXXXXPXRXVSXGGXGXPP 857
P P P A F G P P P G KG G P + GG G P
Sbjct: 140 PDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPG 199
Query: 858 QXGLXAKPPR*XXPGA 905
Q G P PGA
Sbjct: 200 QAGQDGHPGNAGAPGA 215
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +3
Query: 621 PKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSP 788
P APP K + P+ P K PP P P PA K P P
Sbjct: 445 PSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPP 500
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +3
Query: 621 PK-APPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSP 788
PK APPP +P+ P K+P PP PP A P P P P
Sbjct: 470 PKPAPPPPSRIPNPSPSPQ---PAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 31.1 bits (67), Expect = 1.6
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +3
Query: 690 GXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGL 869
G K P PP P A P G+P S G G P G G P G
Sbjct: 181 GCKTCPAGPPGPPGPAGQAGRPGNDGQPGAPSFGGGVGAPGAPGPAGDAGSPGQPGAPGQ 240
Query: 870 XAKP 881
+P
Sbjct: 241 PGRP 244
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +3
Query: 753 PAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPG 902
P G P P P G+ G P + G G P G +P PG
Sbjct: 211 PGTAGSPGPQGPPGQNGNDGQPGNDGAPGQPGQPGPDGHPGQPGNAGPPG 260
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 30.7 bits (66), Expect = 2.1
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +3
Query: 690 GXKKTPXXP--PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQX 863
G P P P PP P KP P P G G P G G P Q
Sbjct: 118 GKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQD 177
Query: 864 GLXAKP 881
+P
Sbjct: 178 AAPGEP 183
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/58 (27%), Positives = 20/58 (34%)
Frame = +3
Query: 705 PXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAK 878
P PP +P P G P P G+ G P G G P + G+ K
Sbjct: 225 PQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPGPAGPPGSPGERGICPK 282
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.3 bits (65), Expect = 2.8
Identities = 36/135 (26%), Positives = 37/135 (27%), Gaps = 3/135 (2%)
Frame = +3
Query: 471 GXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKGXXP-KKGXXXGFXPKAPPP*KX 647
G GGG G GG T NP P K P K G
Sbjct: 96 GGGGGGGGGEAAGGGGGCTG--CCNPGPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAP 153
Query: 648 XKKSTPNXXXAXPXGXKKTPXXP--PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPX 821
+ STP P G P P P PA P P P G G P
Sbjct: 154 CEPSTPPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAG---PPG 210
Query: 822 RXVSXGGXGXPPQXG 866
G G P Q G
Sbjct: 211 NDGQPGQPGGPGQDG 225
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.3 bits (65), Expect = 2.8
Identities = 28/107 (26%), Positives = 31/107 (28%), Gaps = 3/107 (2%)
Frame = +3
Query: 546 PXKKXXTKXPQKGXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPX---GXKKTPXXP 716
P K T P P+ G + PPP S P P G P
Sbjct: 99 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRP 158
Query: 717 PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPP 857
P PP P P G+P S G P G G PP
Sbjct: 159 PP-PPKGTGSPPPPPTGEPQDLSTEGNASRRPPP----PPKGTGTPP 200
Score = 29.5 bits (63), Expect = 4.9
Identities = 27/107 (25%), Positives = 32/107 (29%), Gaps = 3/107 (2%)
Frame = +3
Query: 546 PXKKXXTKXPQKGXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPX---GXKKTPXXP 716
P K T P P+ G+ + PPP S P G P
Sbjct: 192 PPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASRRP 251
Query: 717 PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPP 857
P PP P P G+P S G+G P G PP
Sbjct: 252 PP-PPKGTGSPPPPPTGEPQDLS--GEGNASRRPPPPPKGTGTPPPP 295
Score = 28.7 bits (61), Expect = 8.6
Identities = 26/110 (23%), Positives = 32/110 (29%), Gaps = 3/110 (2%)
Frame = +3
Query: 546 PXKKXXTKXPQKGXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPX---GXKKTPXXP 716
P K T P P+ G + PPP + P P +
Sbjct: 36 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRR 95
Query: 717 PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXG 866
P PP P P G+P S G+G P G PP G
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLS--GEGNASRRPPPPPKGTGSPPPPPTG 143
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 2.8
Identities = 26/96 (27%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = +3
Query: 573 PQKGXXPKKGXXX-GFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFP 749
P G P +G GF P PPP ++ P G P PP
Sbjct: 722 PGVGPPPPQGIPPMGFDPNKPPP-PMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHH 780
Query: 750 XPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPP 857
P P P G+GG P G G PP
Sbjct: 781 MP-----PPPSFRGGRGGHGGPPPPHFDRRGGGGPP 811
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.9 bits (64), Expect = 3.7
Identities = 40/168 (23%), Positives = 42/168 (25%), Gaps = 2/168 (1%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGG-GXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQK 581
PG G P P PG G G G K P P
Sbjct: 109 PGPPGPGGSPGKPGKPGKPGAPGAPGAAGKGASAPCEAK-TPPPCQPCPAGPPGPPGPDG 167
Query: 582 GXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXP-PXNPPXAXXFPXPA 758
P P AP P P A P G P P P +P PA
Sbjct: 168 PAGPAGPDGEAGSPAAPSPPGPPGPPGP----AGPAGNDGAAGTPGPDGPAGESTYPEPA 223
Query: 759 XXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPG 902
G P P G G + G G P G P PG
Sbjct: 224 GPGPAGPPGPAGPPGPDGASP-TAAPGAAGPPGPPGPAGAPGPDGNPG 270
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 753 PAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPP 857
P G+P P P G+ G P R + GG P
Sbjct: 151 PCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRP 185
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +3
Query: 717 PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXG 866
P P P + G+P P P G G P G G P Q G
Sbjct: 228 PRGAPGPAGHPGSSGGGRPGPAGPKGAPGQPGRPGPDGHPGQPGRPGQSG 277
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.9 bits (64), Expect = 3.7
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +3
Query: 690 GXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGL 869
G TP P PP A P KP P P G G P G G P
Sbjct: 123 GAPGTPGTP-GKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAA 181
Query: 870 XAKPPR*XXPG 902
P PG
Sbjct: 182 PGSPGPRGPPG 192
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.9 bits (64), Expect = 3.7
Identities = 35/130 (26%), Positives = 37/130 (28%), Gaps = 2/130 (1%)
Frame = +3
Query: 471 GXXGGGXGFXPXXG-GKXVTXKIXXNPXKKXXTKXPQKGXXPKKGXXXGFXPKAPPP*KX 647
G GGG G G P K P P KG P PP +
Sbjct: 90 GGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQP 149
Query: 648 XKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPX-PAXXGKPXPXSPXGKGGXXXXPXR 824
P P G P PP PP P PA P P P G G
Sbjct: 150 CPGGPPG-----PAG----PAGPP-GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGA 199
Query: 825 XVSXGGXGXP 854
+ GG G P
Sbjct: 200 PGAPGGPGEP 209
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.9 bits (64), Expect = 3.7
Identities = 35/130 (26%), Positives = 37/130 (28%), Gaps = 2/130 (1%)
Frame = +3
Query: 471 GXXGGGXGFXPXXG-GKXVTXKIXXNPXKKXXTKXPQKGXXPKKGXXXGFXPKAPPP*KX 647
G GGG G G P K P P KG P PP +
Sbjct: 90 GGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQP 149
Query: 648 XKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPX-PAXXGKPXPXSPXGKGGXXXXPXR 824
P P G P PP PP P PA P P P G G
Sbjct: 150 CPGGPPG-----PAG----PAGPP-GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGA 199
Query: 825 XVSXGGXGXP 854
+ GG G P
Sbjct: 200 PGAPGGPGEP 209
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.9 bits (64), Expect = 3.7
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +3
Query: 690 GXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGL 869
G TP P PP A P KP P P G G P G G P
Sbjct: 118 GAPGTPGTP-GKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAA 176
Query: 870 XAKPPR*XXPG 902
P PG
Sbjct: 177 PGSPGPRGPPG 187
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.9 bits (64), Expect = 3.7
Identities = 34/145 (23%), Positives = 41/145 (28%), Gaps = 1/145 (0%)
Frame = +3
Query: 447 PPXXPXXPGXXGG-GXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKGXXPKKGXXXGFXP 623
PP P PG G G P G T + P + P + P G
Sbjct: 156 PPGPPGPPGAPGDPGEAGTPGRPGTDATPGL---PGPRGPPGPPGEAGQPGPQGDAGTPA 212
Query: 624 KAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGG 803
++ P TP P PP P P G P P P G G
Sbjct: 213 QSEP-------LTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDG 265
Query: 804 XXXXPXRXVSXGGXGXPPQXGLXAK 878
P G G P + G+ K
Sbjct: 266 QAGPPG---PPGQAGTPGEKGICPK 287
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +3
Query: 690 GXKKTPXXP--PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQX 863
G P P P PP A P KP P P G G P G G P +
Sbjct: 122 GRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPG---DPGEAGTPGRP 178
Query: 864 GLXAKP 881
G A P
Sbjct: 179 GTDATP 184
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 29.9 bits (64), Expect = 3.7
Identities = 36/145 (24%), Positives = 39/145 (26%), Gaps = 1/145 (0%)
Frame = +3
Query: 447 PPXXPXXPGXXGG-GXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKGXXPKKGXXXGFXP 623
PP P PG G G P G K P K P G
Sbjct: 155 PPGAPGLPGDQGDKGEAGQPGQPGSDAAP---GEQGPKGPNGAPGKPGAPGAPGDEGLPA 211
Query: 624 KAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGG 803
P K ST P G P P N P G P P GK G
Sbjct: 212 VCEPVQKGEPGSTGEPGPVGPPG----PSGQPGNDGT------PGQPGPKGPPGPDGKPG 261
Query: 804 XXXXPXRXVSXGGXGXPPQXGLXAK 878
P + G G P + G+ K
Sbjct: 262 ADGNPGQPGPVGPPGTPGERGICPK 286
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 29.9 bits (64), Expect = 3.7
Identities = 36/145 (24%), Positives = 39/145 (26%), Gaps = 1/145 (0%)
Frame = +3
Query: 447 PPXXPXXPGXXGG-GXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKGXXPKKGXXXGFXP 623
PP P PG G G P G K P K P G
Sbjct: 155 PPGAPGLPGDQGDKGEAGQPGQPGSDAAP---GEQGPKGPNGAPGKPGAPGAPGDEGLPA 211
Query: 624 KAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGG 803
P K ST P G P P N P G P P GK G
Sbjct: 212 VCEPVQKGEPGSTGEPGPVGPPG----PSGQPGNDGT------PGQPGPKGPPGPDGKPG 261
Query: 804 XXXXPXRXVSXGGXGXPPQXGLXAK 878
P + G G P + G+ K
Sbjct: 262 ADGNPGQPGPVGPPGTPGERGICPK 286
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.9 bits (64), Expect = 3.7
Identities = 35/130 (26%), Positives = 37/130 (28%), Gaps = 2/130 (1%)
Frame = +3
Query: 471 GXXGGGXGFXPXXG-GKXVTXKIXXNPXKKXXTKXPQKGXXPKKGXXXGFXPKAPPP*KX 647
G GGG G G P K P P KG P PP +
Sbjct: 90 GGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQP 149
Query: 648 XKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPX-PAXXGKPXPXSPXGKGGXXXXPXR 824
P P G P PP PP P PA P P P G G
Sbjct: 150 CPGGPPG-----PAG----PAGPP-GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGA 199
Query: 825 XVSXGGXGXP 854
+ GG G P
Sbjct: 200 PGAPGGPGEP 209
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.9 bits (64), Expect = 3.7
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +3
Query: 690 GXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGL 869
G TP P PP A P KP P P G G P G G P
Sbjct: 118 GAPGTPGTP-GKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAA 176
Query: 870 XAKPPR*XXPG 902
P PG
Sbjct: 177 PGSPGPRGPPG 187
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.9 bits (64), Expect = 3.7
Identities = 35/130 (26%), Positives = 37/130 (28%), Gaps = 2/130 (1%)
Frame = +3
Query: 471 GXXGGGXGFXPXXG-GKXVTXKIXXNPXKKXXTKXPQKGXXPKKGXXXGFXPKAPPP*KX 647
G GGG G G P K P P KG P PP +
Sbjct: 90 GGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQP 149
Query: 648 XKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPX-PAXXGKPXPXSPXGKGGXXXXPXR 824
P P G P PP PP P PA P P P G G
Sbjct: 150 CPGGPPG-----PAG----PAGPP-GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGA 199
Query: 825 XVSXGGXGXP 854
+ GG G P
Sbjct: 200 PGAPGGPGEP 209
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +3
Query: 717 PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XX 896
P PP A P KP P P G G G G P Q G +P
Sbjct: 127 PGRPPQAPCDPITPPPCKPCPQGPPGVQGPPGPAGDAGLDGQPGGPGQDGQPGQPGPKGP 186
Query: 897 PG 902
PG
Sbjct: 187 PG 188
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/76 (26%), Positives = 21/76 (27%)
Frame = +2
Query: 713 PPXKPPXXPXXSPPCXXRKTXPXFPLXXGGXXXXXXPXGFXXGVXATPPXGAXCKTPPLX 892
PP P P PPC P P+ G P P G C P
Sbjct: 57 PPPPPCFGPACPPPCFGPACVPLAPIIVNGPPPCFGP------ACPPPCFGPACAPPAPI 110
Query: 893 PTGGPNRXXXVXXPPP 940
GP PPP
Sbjct: 111 IVNGPPPCFGPACPPP 126
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.9 bits (64), Expect = 3.7
Identities = 34/145 (23%), Positives = 41/145 (28%), Gaps = 1/145 (0%)
Frame = +3
Query: 447 PPXXPXXPGXXGG-GXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKGXXPKKGXXXGFXP 623
PP P PG G G P G T + P + P + P G
Sbjct: 156 PPGPPGPPGAPGDPGEAGTPGRPGTDATPGL---PGPRGPPGPPGEAGQPGPQGDAGTPA 212
Query: 624 KAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGG 803
++ P TP P PP P P G P P P G G
Sbjct: 213 QSEP-------LTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDG 265
Query: 804 XXXXPXRXVSXGGXGXPPQXGLXAK 878
P G G P + G+ K
Sbjct: 266 QAGPPG---PPGQAGTPGEKGICPK 287
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +3
Query: 690 GXKKTPXXP--PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQX 863
G P P P PP A P KP P P G G P G G P +
Sbjct: 122 GRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPG---DPGEAGTPGRP 178
Query: 864 GLXAKP 881
G A P
Sbjct: 179 GTDATP 184
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.5 bits (63), Expect = 4.9
Identities = 26/99 (26%), Positives = 29/99 (29%), Gaps = 4/99 (4%)
Frame = +3
Query: 582 GXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNP--PXAXXFPXP 755
G G G P PP + N A G + P P P P
Sbjct: 128 GDAGSPGEAGGAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGPPGPDG 187
Query: 756 AXXGK--PXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXG 866
A G P P P G G P + G G P Q G
Sbjct: 188 APGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPGQDG 226
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.5 bits (63), Expect = 4.9
Identities = 26/99 (26%), Positives = 29/99 (29%), Gaps = 4/99 (4%)
Frame = +3
Query: 582 GXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNP--PXAXXFPXP 755
G G G P PP + N A G + P P P P
Sbjct: 128 GDAGSPGEAGGAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGPPGPDG 187
Query: 756 AXXGK--PXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXG 866
A G P P P G G P + G G P Q G
Sbjct: 188 APGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPGQDG 226
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/76 (27%), Positives = 23/76 (30%), Gaps = 2/76 (2%)
Frame = +3
Query: 684 PXGXKKTPXXP--PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPP 857
P + P P P PP P G P P P G G P G G P
Sbjct: 126 PGNPGRPPQQPCDPITPPPCQPCPQ-GPPGPPGPPGPSGDAGSNGNPGSPGQDGQPGAPG 184
Query: 858 QXGLXAKPPR*XXPGA 905
G + PGA
Sbjct: 185 NKGPSGQNGNPGAPGA 200
Score = 29.1 bits (62), Expect = 6.5
Identities = 21/74 (28%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Frame = +3
Query: 690 GXKKTPXXPPXNP--PXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQX 863
G P PP P P P G P P P G G S G G P
Sbjct: 124 GLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGSNGNPGSPGQDGQPGAP 183
Query: 864 GLXAKPPR*XXPGA 905
G + PGA
Sbjct: 184 GNKGPSGQNGNPGA 197
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.5 bits (63), Expect = 4.9
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = +3
Query: 684 PXGXKKTPXXP--PXNPPXAXXFPXPAXX-GKPXPXSPXGKGGXXXXPXRXVSXGGXGXP 854
P + P P P PP P PA G P P P G G P + G G P
Sbjct: 126 PGNPGRPPQQPCEPITPPPCK--PCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQPGAP 183
Query: 855 PQXGLXAKPPR*XXPGA 905
G PGA
Sbjct: 184 GNKGPSGPNGNPGAPGA 200
Score = 28.7 bits (61), Expect = 8.6
Identities = 37/161 (22%), Positives = 42/161 (26%), Gaps = 2/161 (1%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKG 584
PG G P P PG G G P + +T P K P
Sbjct: 102 PGAAGPAGTPGKPGRPGKPGAPGLPGN-PGRPPQQPCEPITP-----PPCKPCPAGPAGA 155
Query: 585 XXPK-KGXXXGFXPKAPPP*KXXKKSTP-NXXXAXPXGXKKTPXXPPXNPPXAXXFPXPA 758
P G P + P N + P G P P P P
Sbjct: 156 PGPAGPAGDAGANGNPGAPGNDGQPGAPGNKGPSGPNGNPGAPGAP--GQPGQDAPSEPI 213
Query: 759 XXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKP 881
G P P P G G P + G G P G P
Sbjct: 214 TPGAPGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGNP 254
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 4.9
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = +3
Query: 684 PXGXKKTPXXP--PXNPPXAXXFPXPAXX-GKPXPXSPXGKGGXXXXPXRXVSXGGXGXP 854
P + P P P PP P PA G P P P G G P + G G P
Sbjct: 126 PGNPGRPPQQPCEPITPPPCK--PCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQPGAP 183
Query: 855 PQXGLXAKPPR*XXPGA 905
G PGA
Sbjct: 184 GNKGPSGPNGNPGAPGA 200
Score = 28.7 bits (61), Expect = 8.6
Identities = 37/161 (22%), Positives = 42/161 (26%), Gaps = 2/161 (1%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKG 584
PG G P P PG G G P + +T P K P
Sbjct: 102 PGAAGPAGTPGKPGRPGKPGAPGLPGN-PGRPPQQPCEPITP-----PPCKPCPAGPAGA 155
Query: 585 XXPK-KGXXXGFXPKAPPP*KXXKKSTP-NXXXAXPXGXKKTPXXPPXNPPXAXXFPXPA 758
P G P + P N + P G P P P P
Sbjct: 156 PGPAGPAGDAGANGNPGAPGNDGQPGAPGNKGPSGPNGNPGAPGAP--GQPGQDAPSEPI 213
Query: 759 XXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKP 881
G P P P G G P + G G P G P
Sbjct: 214 TPGAPGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGNP 254
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 29.5 bits (63), Expect = 4.9
Identities = 25/100 (25%), Positives = 30/100 (30%), Gaps = 9/100 (9%)
Frame = +3
Query: 576 QKGXXPKKGXXXGFXPKAPP--P*KXXKKSTPNXXXAXPXGXKKTPXXP-------PXNP 728
+ G P +G P PP P A P +TP P P P
Sbjct: 187 EDGNTPSRGGVGEAGPPGPPGTSGNPGTDGAPGNPGA-PGQVTETPGTPGPAGAAGPPGP 245
Query: 729 PXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXG 848
P P A +P P P G G P + G G
Sbjct: 246 PGPAGNPGSAGASEPGPAGPAGDAGPDGAPGNAGAPGAPG 285
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.5 bits (63), Expect = 4.9
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = +3
Query: 684 PXGXKKTPXXP--PXNPPXAXXFPXPAXX-GKPXPXSPXGKGGXXXXPXRXVSXGGXGXP 854
P + P P P PP P PA G P P P G G P + G G P
Sbjct: 126 PGNPGRPPQQPCEPITPPPCK--PCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQPGAP 183
Query: 855 PQXGLXAKPPR*XXPGA 905
G PGA
Sbjct: 184 GNKGPSGPNGNPGAPGA 200
Score = 28.7 bits (61), Expect = 8.6
Identities = 37/161 (22%), Positives = 42/161 (26%), Gaps = 2/161 (1%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKG 584
PG G P P PG G G P + +T P K P
Sbjct: 102 PGAAGPAGTPGKPGRPGKPGAPGLPGN-PGRPPQQPCEPITP-----PPCKPCPAGPAGA 155
Query: 585 XXPK-KGXXXGFXPKAPPP*KXXKKSTP-NXXXAXPXGXKKTPXXPPXNPPXAXXFPXPA 758
P G P + P N + P G P P P P
Sbjct: 156 PGPAGPAGDAGANGNPGAPGNDGQPGAPGNKGPSGPNGNPGAPGAP--GQPGQDAPSEPI 213
Query: 759 XXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKP 881
G P P P G G P + G G P G P
Sbjct: 214 TPGAPGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGNP 254
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.5 bits (63), Expect = 4.9
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = +3
Query: 684 PXGXKKTPXXP--PXNPPXAXXFPXPAXX-GKPXPXSPXGKGGXXXXPXRXVSXGGXGXP 854
P + P P P PP P PA G P P P G G P + G G P
Sbjct: 126 PGNPGRPPQQPCEPITPPPCK--PCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQPGAP 183
Query: 855 PQXGLXAKPPR*XXPGA 905
G PGA
Sbjct: 184 GNKGPSGPNGNPGAPGA 200
Score = 28.7 bits (61), Expect = 8.6
Identities = 37/161 (22%), Positives = 42/161 (26%), Gaps = 2/161 (1%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKG 584
PG G P P PG G G P + +T P K P
Sbjct: 102 PGAAGPAGTPGKPGRPGKPGAPGLPGN-PGRPPQQPCEPITP-----PPCKPCPAGPAGA 155
Query: 585 XXPK-KGXXXGFXPKAPPP*KXXKKSTP-NXXXAXPXGXKKTPXXPPXNPPXAXXFPXPA 758
P G P + P N + P G P P P P
Sbjct: 156 PGPAGPAGDAGANGNPGAPGNDGQPGAPGNKGPSGPNGNPGAPGAP--GQPGQDAPSEPI 213
Query: 759 XXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKP 881
G P P P G G P + G G P G P
Sbjct: 214 TPGAPGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGNP 254
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 29.5 bits (63), Expect = 4.9
Identities = 23/86 (26%), Positives = 24/86 (27%), Gaps = 1/86 (1%)
Frame = +3
Query: 705 PXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAK-P 881
P PP A P G P P GK G P + G G P P
Sbjct: 216 PPGPPGPNGEAGAGSGPGPEGPAGPPGPNGKDGEAGAPGKDGDAGADGAPGTDAAYCPCP 275
Query: 882 PR*XXPGALTGXXXFXXPPRKKKXXP 959
PR GA G P P
Sbjct: 276 PRSAALGAGGGAEPAGAAPEAAAAAP 301
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 6.5
Identities = 23/68 (33%), Positives = 27/68 (39%)
Frame = +3
Query: 684 PXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQX 863
P G ++ P PP P A P P +P P +P G GG P G G PP
Sbjct: 773 PPGGRQAPM-PPRGGPGAP--PPPGM--RPPPGAPGG-GGGMYPPLIPTRPGPGGPPPNM 826
Query: 864 GLXAKPPR 887
PPR
Sbjct: 827 A----PPR 830
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.1 bits (62), Expect = 6.5
Identities = 37/161 (22%), Positives = 43/161 (26%), Gaps = 2/161 (1%)
Frame = +3
Query: 405 PGERGXXXXXPSXSPPXXPXXPGXXGGGXGFXPXXGGKXVTXKIXXNPXKKXXTKXPQKG 584
PG G P P PG G G P + +T P K P
Sbjct: 102 PGAAGPAGTPGKPGRPGKPGAPGLPGN-PGRPPQQPCEPITP-----PPCKPCPAGPAGA 155
Query: 585 XXPK-KGXXXGFXPKAPPP*KXXKKSTP-NXXXAXPXGXKKTPXXPPXNPPXAXXFPXPA 758
P G P + + P N + P G P P P P
Sbjct: 156 PGPAGPAGDAGANGNPGAPGQDGQPGAPGNKGPSGPNGNPGAPGAP--GQPGQDAPSEPI 213
Query: 759 XXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKP 881
G P P P G G P + G G P G P
Sbjct: 214 TPGAPGPAGPAGPQGQPGAPGQPGHDGQPGAPGPKGPNGNP 254
Score = 29.1 bits (62), Expect = 6.5
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 3/77 (3%)
Frame = +3
Query: 684 PXGXKKTPXXP--PXNPPXAXXFPXPAXX-GKPXPXSPXGKGGXXXXPXRXVSXGGXGXP 854
P + P P P PP P PA G P P P G G P G G P
Sbjct: 126 PGNPGRPPQQPCEPITPPPCK--PCPAGPAGAPGPAGPAGDAGANGNPGAPGQDGQPGAP 183
Query: 855 PQXGLXAKPPR*XXPGA 905
G PGA
Sbjct: 184 GNKGPSGPNGNPGAPGA 200
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 29.1 bits (62), Expect = 6.5
Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = +3
Query: 690 GXKKTPXXP--PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQX 863
G K P P P P P G+P P P G+ G P + G G +
Sbjct: 169 GRKGPPGPPGGPGGPGEGGDGGRPGNPGRPGPAGPRGEPGTEYKPGQPGRPGPPGPRGEA 228
Query: 864 GLXAKP 881
G +P
Sbjct: 229 GPAGQP 234
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +3
Query: 753 PAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAKP 881
P G+P P P G+ G P + G G P G P
Sbjct: 213 PGQPGRPGPPGPRGEAGPAGQPGSPGNDGESGKPGNAGRPGPP 255
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 6.5
Identities = 25/93 (26%), Positives = 26/93 (27%)
Frame = +2
Query: 662 PQXXGGKXPRDXKNPXXPPXKPPXXPXXSPPCXXRKTXPXFPLXXGGXXXXXXPXGFXXG 841
P GG P P PP P PP P P GG G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP---GGLPP------ISGG 757
Query: 842 VXATPPXGAXCKTPPLXPTGGPNRXXXVXXPPP 940
PP C PP P G + PPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 8.6
Identities = 21/82 (25%), Positives = 23/82 (28%)
Frame = +3
Query: 630 PPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXX 809
PPP T P G P PP P + P P P G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 810 XXPXRXVSXGGXGXPPQXGLXA 875
P GG PP G+ A
Sbjct: 773 PPPPPGGFKGGPPPPPPPGMFA 794
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 6.5
Identities = 25/93 (26%), Positives = 26/93 (27%)
Frame = +2
Query: 662 PQXXGGKXPRDXKNPXXPPXKPPXXPXXSPPCXXRKTXPXFPLXXGGXXXXXXPXGFXXG 841
P GG P P PP P PP P P GG G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP---GGLPP------ISGG 757
Query: 842 VXATPPXGAXCKTPPLXPTGGPNRXXXVXXPPP 940
PP C PP P G + PPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 8.6
Identities = 21/82 (25%), Positives = 23/82 (28%)
Frame = +3
Query: 630 PPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXX 809
PPP T P G P PP P + P P P G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 810 XXPXRXVSXGGXGXPPQXGLXA 875
P GG PP G+ A
Sbjct: 773 PPPPPGGFKGGPPPPPPPGMFA 794
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 6.5
Identities = 23/68 (33%), Positives = 27/68 (39%)
Frame = +3
Query: 684 PXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQX 863
P G ++ P PP P A P P +P P +P G GG P G G PP
Sbjct: 773 PPGGRQAPM-PPRGGPGAP--PPPGM--RPPPGAPGG-GGGMYPPLIPTRPGPGGPPPNM 826
Query: 864 GLXAKPPR 887
PPR
Sbjct: 827 A----PPR 830
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 6.5
Identities = 25/93 (26%), Positives = 26/93 (27%)
Frame = +2
Query: 662 PQXXGGKXPRDXKNPXXPPXKPPXXPXXSPPCXXRKTXPXFPLXXGGXXXXXXPXGFXXG 841
P GG P P PP P PP P P GG G
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP---GGLPP------ISGG 340
Query: 842 VXATPPXGAXCKTPPLXPTGGPNRXXXVXXPPP 940
PP C PP P G + PPP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 28.7 bits (61), Expect = 8.6
Identities = 21/82 (25%), Positives = 23/82 (28%)
Frame = +3
Query: 630 PPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXX 809
PPP T P G P PP P + P P P G
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 810 XXPXRXVSXGGXGXPPQXGLXA 875
P GG PP G+ A
Sbjct: 356 PPPPPGGFKGGPPPPPPPGMFA 377
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 29.1 bits (62), Expect = 6.5
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 2/74 (2%)
Frame = +3
Query: 690 GXKKTPXXPPXNPPXAXXFPX--PAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQX 863
G P PP P P P G P P G G P G G P
Sbjct: 115 GMPGNPGKPPQQPCELVTPPPCSPCPAGPPGKPGPQGAPGDIGQPGNPGERGMDGEPGPP 174
Query: 864 GLXAKPPR*XXPGA 905
G P PGA
Sbjct: 175 GPTGPPGEPGLPGA 188
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 6.5
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = +3
Query: 705 PXXPPXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLXAK-P 881
P PP PP A G P P P G G P + G G P P
Sbjct: 256 PPGPP-GPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCP 314
Query: 882 PR 887
PR
Sbjct: 315 PR 316
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 28.7 bits (61), Expect = 8.6
Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Frame = +3
Query: 633 PP*KXXKKSTPNXXXAXPXGXKKTPXXP-PXNPPXAXXFPXP-AXXGKPXPXSPXGKGGX 806
PP + + TP P G P P P A P + G P P P G G
Sbjct: 137 PPAQPCEPITPPPCKPCPQGPAGAPGAPGPQGDAGAPGAPGQGSGAGAPGPAGPKGASGA 196
Query: 807 XXXPXRXVSXGGXGXPPQ 860
P + + G G Q
Sbjct: 197 PGNPGQAGAPGQPGADAQ 214
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.7 bits (61), Expect = 8.6
Identities = 25/99 (25%), Positives = 32/99 (32%), Gaps = 1/99 (1%)
Frame = +3
Query: 573 PQKGXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPX 752
P G G G P P ++ P+ P +T P +PP P
Sbjct: 158 PPGGPGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAP--SPPGQPGQPG 215
Query: 753 -PAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXG 866
P G+P P G G P GG G P + G
Sbjct: 216 EPGSPGEPGPDGRAGHPGRNGPPGPPGDNGGQGEPGKDG 254
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.7 bits (61), Expect = 8.6
Identities = 25/99 (25%), Positives = 32/99 (32%), Gaps = 1/99 (1%)
Frame = +3
Query: 573 PQKGXXPKKGXXXGFXPKAPPP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXXFPX 752
P G G G P P ++ P+ P +T P +PP P
Sbjct: 158 PPGGPGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAP--SPPGQPGQPG 215
Query: 753 -PAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXG 866
P G+P P G G P GG G P + G
Sbjct: 216 EPGSPGEPGPDGRAGHPGRNGPPGPPGDNGGQGEPGKDG 254
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.7 bits (61), Expect = 8.6
Identities = 21/76 (27%), Positives = 22/76 (28%), Gaps = 2/76 (2%)
Frame = +3
Query: 684 PXGXKKTPXXP--PXNPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPP 857
P + P P P PP P G P P P G G P G G P
Sbjct: 126 PGNPGRPPQQPCDPITPPPCQPCPQ-GPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPG 184
Query: 858 QXGLXAKPPR*XXPGA 905
G PGA
Sbjct: 185 NKGPSGPNGNPGAPGA 200
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 28.7 bits (61), Expect = 8.6
Identities = 27/96 (28%), Positives = 28/96 (29%), Gaps = 6/96 (6%)
Frame = +3
Query: 633 PP*KXXKKSTPNXXXAXPXGXKKTPXXPPXNPPXAXX-----FPXPAXX-GKPXPXSPXG 794
PP + TP P G T P N P A P PA G P P G
Sbjct: 110 PPGPAGQPGTPGAPG--PKGQDSTTTFAPINCPTAPSDCIKCAPGPAGPAGSAGPAGPKG 167
Query: 795 KGGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPG 902
G P G G P G P PG
Sbjct: 168 PDGRPGQPGSAGHPGAPGQPGSKGNNGAPGAAGGPG 203
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.7 bits (61), Expect = 8.6
Identities = 26/110 (23%), Positives = 32/110 (29%), Gaps = 1/110 (0%)
Frame = +3
Query: 621 PKAPPP*KXXKKSTPNXXXAX-PXGXKKTPXXPPXNPPXAXXFPXPAXXGKPXPXSPXGK 797
P PPP + + P + P G P P P + P P
Sbjct: 149 PITPPPCRPCPQGPPGAPGSPGPQGNAGAPGQPGHGGGSGAPGPAGPKGQRGAPGHPGQA 208
Query: 798 GGXXXXPXRXVSXGGXGXPPQXGLXAKPPR*XXPGALTGXXXFXXPPRKK 947
G S G P Q G P PGA G + PP +K
Sbjct: 209 GSPGRPGVDAQSQSNPGAPGQAGPQGPPGPSGAPGA-PGGPGYPGPPGQK 257
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +3
Query: 717 PXNPPXAXXFPX-PAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXG 866
P PP P P G P P G G P + G G P Q G
Sbjct: 232 PQGPPGPSGAPGAPGGPGYPGPPGQKGPSGAPGQPGSDGNPGAPGQPGQSG 282
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 8.6
Identities = 18/63 (28%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = +3
Query: 696 KKTPXXPPX-NPPXAXXFPXPAXXGKPXPXSPXGKGGXXXXPXRXVSXGGXGXPPQXGLX 872
K P PP N P G P P P G G P R G P G+
Sbjct: 125 KYLPAPPPGTNACQKCPTGAPGPPGLPGPKGPRGPAGIEGKPGRLGEDNRPGPPGPPGVR 184
Query: 873 AKP 881
+P
Sbjct: 185 GEP 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,872,855
Number of Sequences: 27780
Number of extensions: 249297
Number of successful extensions: 2421
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1950
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3286854270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -