Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_A14
(1177 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1199 + 11391638-11391718,11393477-11393590,11393690-113938... 92 7e-19
01_05_0105 - 18155135-18155297,18155379-18155515,18155621-181557... 91 2e-18
05_05_0279 - 23794964-23795111,23795486-23795634,23796120-237962... 39 0.007
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 39 0.007
07_01_0849 + 6896930-6896996,6897453-6897474,6897615-6897690,689... 39 0.009
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 35 0.11
02_05_0841 + 32129863-32130294,32130395-32130459,32130565-321307... 30 3.1
07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616... 30 4.1
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093... 29 5.4
04_01_0518 - 6795833-6796450,6799940-6800164 29 7.1
03_01_0050 + 430744-431337,432131-432249,432539-433084,433177-43... 29 7.1
02_05_0338 - 28084169-28084366,28084414-28085225,28085565-280855... 29 7.1
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 9.4
>07_01_1199 +
11391638-11391718,11393477-11393590,11393690-11393826,
11393905-11394064
Length = 163
Score = 92.3 bits (219), Expect = 7e-19
Identities = 41/125 (32%), Positives = 78/125 (62%), Gaps = 2/125 (1%)
Frame = +1
Query: 217 QRLKRRRIPXKTKWTKAYRKTAGKELSIDPSFEFEKRRNVPLKYNRELWTKTIEAMKKVE 396
+ K +R P K KWTKAYR GK+++ D +FEFE++RN P +Y+R + +T++A+ +
Sbjct: 38 KNFKMKRNPRKVKWTKAYRCLHGKDMTQDSTFEFERKRNRPERYDRNVTEQTLKAISLIT 97
Query: 397 EIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLI--KSPAAGLKQRQALEATEMEVE 570
+IR R +I +R +QG+ + +RD +E+++DI ++ K + K + ++ ++ + E
Sbjct: 98 KIRHERQKKHITERQKQGKTKQRERDAKELEQDIQMLPKKVTLSTQKTKVVVKVSQQQTE 157
Query: 571 PETIE 585
+E
Sbjct: 158 ENLME 162
Score = 71.7 bits (168), Expect = 1e-12
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +3
Query: 144 YPGHGIQFVRNDCKIFRFCRSKCHAAFKKKKNPR 245
YPGHGIQFVRND KIFRFCRSKCH FK K+NPR
Sbjct: 14 YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPR 47
>01_05_0105 -
18155135-18155297,18155379-18155515,18155621-18155734,
18155768-18155806,18156838-18156993
Length = 202
Score = 90.6 bits (215), Expect = 2e-18
Identities = 41/126 (32%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Frame = +1
Query: 217 QRLKRRRIPXKTKWTKAYRKTAGKELSIDPSFEFEKRRNVPLKYNRELWTKTIEAMKKVE 396
+ K +R P K KWTKAYR GK+++ D +FEFE++RN P +Y+R + +T++A+ +
Sbjct: 76 KNFKMKRNPRKVKWTKAYRCLHGKDMTQDSTFEFERKRNRPERYDRNVTAQTLKAIPLIT 135
Query: 397 EIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGL---KQRQALEATEMEV 567
+IR R +I +R +QG+ + +RD +E+++DI ++ L K + ++ ++ +
Sbjct: 136 KIRHERHKKHITERQKQGKTKQRERDAKELEQDIQMLPKKDTMLSTQKTKVVVKVSQQQT 195
Query: 568 EPETIE 585
E +E
Sbjct: 196 EENLME 201
Score = 41.5 bits (93), Expect = 0.001
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3
Query: 186 IFRFCRSKCHAAFKKKKNPR 245
IFRFCRSKCH FK K+NPR
Sbjct: 66 IFRFCRSKCHKNFKMKRNPR 85
>05_05_0279 -
23794964-23795111,23795486-23795634,23796120-23796221,
23796309-23796384,23796578-23796588
Length = 161
Score = 39.1 bits (87), Expect = 0.007
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 144 YPGHGIQFVRNDCKIFRFCRSKCHAAFKKKKNP 242
YPG GI+F+R D ++F F SKC F + P
Sbjct: 16 YPGKGIRFIRADSQVFLFANSKCKRYFHNRLKP 48
>01_06_1123 + 34671365-34671883,34672366-34672625,34673045-34673143,
34673237-34675178,34675588-34675658,34676158-34676307,
34676963-34677038,34677131-34677232,34677707-34677855,
34678214-34678364
Length = 1172
Score = 39.1 bits (87), Expect = 0.007
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 144 YPGHGIQFVRNDCKIFRFCRSKCHAAFKKKKNP 242
YPG GI+F+R D ++F F SKC F + P
Sbjct: 1026 YPGKGIRFIRADSQVFLFANSKCKRYFHNRLKP 1058
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 241 PXKTKWTKAYRKTAGKELSIDPSFEFEKRRNVPLKYNRELWTKTIEAMKK 390
P K WT YRK K++ + ++RR Y+R + T+E ++K
Sbjct: 1058 PAKLTWTAMYRKQHKKDIHAEA--VKKRRRTTKKPYSRSIVGATLEVIQK 1105
>07_01_0849 +
6896930-6896996,6897453-6897474,6897615-6897690,
6897775-6897876,6898156-6898304,6898637-6898784
Length = 187
Score = 38.7 bits (86), Expect = 0.009
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 144 YPGHGIQFVRNDCKIFRFCRSKCHAAFKKKKNP 242
YPG GI+F+R D ++F F SKC F + P
Sbjct: 42 YPGKGIRFIRADSQVFLFSNSKCKRYFHNRLKP 74
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 241 PXKTKWTKAYRKTAGKELSIDPSFEFEKRRNVPLKYNRELWTKTIEAMKK 390
P K WT YRK K++ + ++RR Y+R + T+E ++K
Sbjct: 74 PAKLTWTAMYRKQHKKDIHAEA--VKKRRRTTKKPYSRSIVGATLEVIQK 121
>10_08_0829 -
20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 35.1 bits (77), Expect = 0.11
Identities = 23/94 (24%), Positives = 47/94 (50%)
Frame = +1
Query: 340 LKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPA 519
L+ ++W + +K+ E ++ S + QR Q E WQR R++++ + +K
Sbjct: 298 LRGEAKMWQRKTRKLKQGLETLKKVSTDKSKQRSEQDLEKMWQRKTRKLKQGLETLKKEC 357
Query: 520 AGLKQRQALEATEMEVEPETIEVVDAKGRKQIIE 621
A ++Q +E+E+E +I + + +Q IE
Sbjct: 358 ADKSKQQ----SELELE-LSISISERDSLRQEIE 386
>02_05_0841 +
32129863-32130294,32130395-32130459,32130565-32130774,
32130943-32131024
Length = 262
Score = 30.3 bits (65), Expect = 3.1
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +1
Query: 97 NKMRIETCYFLFIQGFILDTESNLSG--MTAKFSDSVVQNATQRLKRRRIPXKTKWTKAY 270
++ R ET F+ G + D ES+L+G ++ S + Q+ R +IP + +
Sbjct: 163 DRERRETTPSSFLPGEVSDLESDLAGGQKRSRPLPSAATASAQQATRPKIPPAAEIEAFF 222
Query: 271 RKTAGKELS-IDPSFEFEKRRNVPLKYNRELWTKTIEA 381
E + F+ R VPL R WT + +
Sbjct: 223 AAAEEAEAKRFAAKYNFDVVRGVPLDAGRFEWTPVVSS 260
>07_03_0697 +
20759176-20759817,20760592-20760708,20761422-20761696,
20761906-20762068,20762293-20762421,20762989-20763713,
20763853-20764081
Length = 759
Score = 29.9 bits (64), Expect = 4.1
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +1
Query: 151 DTESNLSGMTAKFSDSVVQNATQRLKRR-RIPXKTKWTKAYRK-TAGKELSIDPSFEFE- 321
D+ S+ G +S+ A ++L R R+ + K+ + T G+++ I + E E
Sbjct: 454 DSASDDEGADNHGDESLQSGAKRKLTREERLALLLQGDKSEEEQTDGEDMEITFNTELED 513
Query: 322 -KRRNVPLKYNRE--LWTKTIEAMKKVEEIRQRRSNN 423
+R + K N E +W K E MK+ + R+RRS +
Sbjct: 514 LSKRILDRKVNNEKTVWEKHQEKMKEKRKSRKRRSKD 550
>12_02_0693 -
22207582-22207620,22208421-22208597,22209258-22209347,
22210215-22210280,22210473-22210570,22210669-22210789,
22210875-22212477,22213332-22213915
Length = 925
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 376 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 552
E +++ E+RQR +RL + RE+E QR+ R ++ ++R A EA
Sbjct: 526 ERLEREREMRQREEKEREQRRLEEERELEKQRERERAAR--QAVERATKEARERAAAEA 582
>04_01_0518 - 6795833-6796450,6799940-6800164
Length = 280
Score = 29.1 bits (62), Expect = 7.1
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 367 KTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLK-QRQA 543
+ IE KK EE+ + R I + R++ + V Q+D +++ G + +RQ
Sbjct: 184 RQIEEEKKKEEVERGRLQKEIKEGRESLRKLRLKLGVDVPQQDQEIVQQLERGRQGKRQT 243
Query: 544 LEATEMEVEPETIE 585
+E E++VE E +E
Sbjct: 244 IE--ELQVEHEQLE 255
>03_01_0050 +
430744-431337,432131-432249,432539-433084,433177-433483,
433605-433773,433861-433960,435805-436103,436796-436869,
437007-437442,437622-437650
Length = 890
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 471 RRARSPERHLFDKVTSGWSETATSFRSHRNG 563
RRARSPER L ++ W TA+S S R G
Sbjct: 88 RRARSPERALVRRIAREW--TASSRTSPRGG 116
>02_05_0338 -
28084169-28084366,28084414-28085225,28085565-28085595,
28085638-28086214,28086439-28087145,28087188-28087228,
28087253-28087366,28087517-28088108
Length = 1023
Score = 29.1 bits (62), Expect = 7.1
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +1
Query: 130 FIQGFILDTESNLSGMTAKFSDSVVQNATQRLKRRRIPXKTKWTKAYRKTAGKE--LSID 303
F ++L T+ + V +++KR R+P + K Y G++ LS
Sbjct: 450 FCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRVPNRNKDKTPYEIWIGRKPSLSYL 509
Query: 304 PSFEFEKRRNVPLKYNRELWTKTIEAM 384
++ + NVP+ R+L KT++ +
Sbjct: 510 RTWGCLAKVNVPITKKRKLGPKTVDCV 536
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 28.7 bits (61), Expect = 9.4
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Frame = +1
Query: 148 LDTESNLSGMTAKFSDSVVQNATQRLKRRRIPXKTKWTKAYRKTAGKELSIDPSFEFEKR 327
+D + ++ + A+ D ++ + KRR+ + K + RKT K D +
Sbjct: 117 MDVAATVNDVGAEVKDDEMEAESAAPKRRK---RKKEKEKERKTTSKVAEADAK---KPP 170
Query: 328 RNVPLKYNRELWTKTIEAMKK-VEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRD 495
R+V + K E ++K EE+R+R++ +QR R VE + +++ +RD
Sbjct: 171 RHVRVMLEVLAKRKEAEELRKREEELRKRKAEEERLQREEDERMVE-EMKMQQKERD 226
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,775,723
Number of Sequences: 37544
Number of extensions: 412932
Number of successful extensions: 1082
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3596576368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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