Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_A14
(1177 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75525-5|CAA99764.1| 162|Caenorhabditis elegans Hypothetical pr... 83 5e-16
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.39
AF003151-13|AAK18907.1| 159|Caenorhabditis elegans Ribosomal pr... 32 0.90
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 31 2.1
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 31 2.1
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 30 3.6
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 30 3.6
U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical pr... 30 3.6
U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical pr... 30 3.6
Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical pr... 29 6.4
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 29 6.4
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 29 6.4
Z92831-6|CAB07365.2| 355|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical p... 29 8.4
>Z75525-5|CAA99764.1| 162|Caenorhabditis elegans Hypothetical
protein C03D6.8 protein.
Length = 162
Score = 82.6 bits (195), Expect = 5e-16
Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Frame = +1
Query: 103 MRIETCYFL---FIQGFILDTESNLSGMTAKFSDSVVQNATQRLKRRRIPXKTKWTKAYR 273
MRIE CYF G + N S + KF S + K+++ P K ++TKA R
Sbjct: 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVF-KFCRS---RCNKLFKKKKNPRKLRFTKAAR 56
Query: 274 KTAGKELSIDPSFEFEKRRNVPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGR 453
+ GKEL D + E+RR+ P+KY R ++ KTIEA K + ++ +R N I +RL+ G+
Sbjct: 57 RARGKELINDATQLLEQRRDEPVKYERAMFQKTIEAAKTISALKTKRYGNLIRKRLQPGK 116
Query: 454 EVEWQRDVREVQRDISLIKSPAA---GLKQRQALEATEMEVEPET 579
V+ + + +V + + LI++P A G+K R A + + ET
Sbjct: 117 IVQKKGLLAKVDKKMHLIRAPVANRDGVKTRAAAKEKKTAESMET 161
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.39
Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Frame = +1
Query: 217 QRLKRRRIPXKTKWTKAYRKTAGKELSIDPS--FEFEKRRNVPLKYNRELWTKTIEAMKK 390
+R +R R + + A R+ ++ +D E E+ R + RE K E +K+
Sbjct: 150 ERKERERQQKEKEREDAARREIEEKAEMDAKRVAEEEEERRKEKEKRREEKKKQKELLKE 209
Query: 391 VEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEATEMEVE 570
E ++ + + + RE E +++ RE +R+ K KQ++ + E E E
Sbjct: 210 KERSERKEKERELEREKEKSREKEREKE-REKEREKEREKERE---KQKEREKEREKERE 265
Query: 571 PETIEVVDAKGRKQIIEAPVMV 636
E +A+ +K+ PV++
Sbjct: 266 KEKKREEEARRKKEEASTPVII 287
>AF003151-13|AAK18907.1| 159|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 24.1 protein.
Length = 159
Score = 31.9 bits (69), Expect = 0.90
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 144 YPGHGIQFVRNDCKIFRFCRSKCHAAFKKKKNPR 245
+PGHG + VR D K+ F K K ++NPR
Sbjct: 14 HPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPR 47
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 30.7 bits (66), Expect = 2.1
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 459 RVAKRRARSPERHLFDKVTSGWSETATSFR-SHRNGSGTRDNRSCGR*RQET 611
R K+R +SP R D GW T S + R SG NRS R Q T
Sbjct: 477 RKKKKRPKSPNRSKKDSRAFGWDSTDESDEDTRRRRSGRSQNRSSERKFQTT 528
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 30.7 bits (66), Expect = 2.1
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 459 RVAKRRARSPERHLFDKVTSGWSETATSFR-SHRNGSGTRDNRSCGR*RQET 611
R K+R +SP R D GW T S + R SG NRS R Q T
Sbjct: 477 RKKKKRPKSPNRSKKDSRAFGWDSTDESDEDTRRRRSGRSQNRSSERKFQTT 528
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 29.9 bits (64), Expect = 3.6
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Frame = +1
Query: 178 TAKFSDSVVQNATQRLKRR---RIPXKTKWTKAYRKTAGKELSIDPSFEFEKRRNVPLKY 348
T D VV+ R K R K +WTKA + E S + S + R LK
Sbjct: 89 TEHLKDRVVEALDARRKEHDTVRNALKVEWTKATKSLHDCEESYEKSKITLRMREEALKK 148
Query: 349 NRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGL 528
RE +T + + E R+RR ++ R VE + +++ + + ++ A
Sbjct: 149 ARESCLRTESSPPEREASRRRRDLE------KKSRAVE-EAMIKKEEAERQVVSITAELR 201
Query: 529 KQRQALEATEMEVEPETIEVV 591
K+R+ ++ T+ V E++
Sbjct: 202 KKRRDIDKTKESVVERLRELI 222
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 29.9 bits (64), Expect = 3.6
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Frame = +1
Query: 178 TAKFSDSVVQNATQRLKRR---RIPXKTKWTKAYRKTAGKELSIDPSFEFEKRRNVPLKY 348
T D VV+ R K R K +WTKA + E S + S + R LK
Sbjct: 89 TEHLKDRVVEALDARRKEHDTVRNALKVEWTKATKSLHDCEESYEKSKITLRMREEALKK 148
Query: 349 NRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGL 528
RE +T + + E R+RR ++ R VE + +++ + + ++ A
Sbjct: 149 ARESCLRTESSPPEREASRRRRDLE------KKSRAVE-EAMIKKEEAERQVVSITAELR 201
Query: 529 KQRQALEATEMEVEPETIEVV 591
K+R+ ++ T+ V E++
Sbjct: 202 KKRRDIDKTKESVVERLRELI 222
>U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical
protein C41A3.2b protein.
Length = 526
Score = 29.9 bits (64), Expect = 3.6
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +1
Query: 280 AGKELSIDPSFEFEKRRNVPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREV 459
AG E + + + KRR + R + E KKV+E ++R ++ + +++ REV
Sbjct: 429 AGNEKELSKTEQRAKRRQRVREKARLCAEQAKEEEKKVKE-QKRIEHDLRIMSMKKEREV 487
Query: 460 EWQRDVREVQRDISLIK 510
+ Q D + +RDI I+
Sbjct: 488 KHQLDFEKRKRDIDNIR 504
>U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical
protein C41A3.2a protein.
Length = 795
Score = 29.9 bits (64), Expect = 3.6
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +1
Query: 280 AGKELSIDPSFEFEKRRNVPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREV 459
AG E + + + KRR + R + E KKV+E ++R ++ + +++ REV
Sbjct: 429 AGNEKELSKTEQRAKRRQRVREKARLCAEQAKEEEKKVKE-QKRIEHDLRIMSMKKEREV 487
Query: 460 EWQRDVREVQRDISLIK 510
+ Q D + +RDI I+
Sbjct: 488 KHQLDFEKRKRDIDNIR 504
>Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical
protein T24D1.2 protein.
Length = 464
Score = 29.1 bits (62), Expect = 6.4
Identities = 23/71 (32%), Positives = 27/71 (38%)
Frame = +3
Query: 435 AIETGQRGRVAKRRARSPERHLFDKVTSGWSETATSFRSHRNGSGTRDNRSCGR*RQETD 614
A+ R R A R SP + T+G S+ S S G GTR S R R
Sbjct: 44 AVARRGRNRAAARERASPYSRSRIRSTAGTSDAGPSSSSSVRGRGTRGTTSARRGRGSA- 102
Query: 615 Y*GSGHGTCNR 647
G T NR
Sbjct: 103 --RGGEATMNR 111
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = +1
Query: 319 EKRRNVPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDI 498
E+R+N + E +++E EEI++ +S + Q+L Q E++ +R V+E+
Sbjct: 392 EQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLELQKKR-VQELTEQR 450
Query: 499 SLIKSPAA 522
+++S A+
Sbjct: 451 KVLESKAS 458
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = +1
Query: 319 EKRRNVPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDI 498
E+R+N + E +++E EEI++ +S + Q+L Q E++ +R V+E+
Sbjct: 392 EQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLELQKKR-VQELTEQR 450
Query: 499 SLIKSPAA 522
+++S A+
Sbjct: 451 KVLESKAS 458
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 29.1 bits (62), Expect = 6.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 53 DVCCQNSARHTCLKPIK 103
D CCQN+ TC++P+K
Sbjct: 229 DKCCQNACGSTCMEPLK 245
>Z92831-6|CAB07365.2| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 28.7 bits (61), Expect = 8.4
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Frame = +1
Query: 343 KYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQG----REVEWQRDVREVQRDISLIK 510
K E K IE +K+ + +++ + + R+G RE+E QR+ E QR L+
Sbjct: 69 KAAEERHNKAIEELKRSHKNDKKKLESELESIKRKGEKDVREIEQQREALEKQRTEDLVN 128
Query: 511 SPAAGLK----QRQALEATEMEVEPETIEVVDAKGRKQIIE 621
K + +A++ E + +E +D K ++ IE
Sbjct: 129 HQETMRKLNETKFEAIKKKRDEQQTLKMEEMDEKSKRMAIE 169
>Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 28.7 bits (61), Expect = 8.4
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Frame = +1
Query: 343 KYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQG----REVEWQRDVREVQRDISLIK 510
K E K IE +K+ + +++ + + R+G RE+E QR+ E QR L+
Sbjct: 69 KAAEERHNKAIEELKRSHKNDKKKLESELESIKRKGEKDVREIEQQREALEKQRTEDLVN 128
Query: 511 SPAAGLK----QRQALEATEMEVEPETIEVVDAKGRKQIIE 621
K + +A++ E + +E +D K ++ IE
Sbjct: 129 HQETMRKLNETKFEAIKKKRDEQQTLKMEEMDEKSKRMAIE 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,253,051
Number of Sequences: 27780
Number of extensions: 384990
Number of successful extensions: 1062
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3213813064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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