Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_A12
         (1238 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81034-1|CAB02726.1|  194|Caenorhabditis elegans Hypothetical pr...    32   0.73 
L14429-2|AAP68927.1|  229|Caenorhabditis elegans Hypothetical pr...    29   5.1  
L14429-1|AAA28219.2|  575|Caenorhabditis elegans Hypothetical pr...    29   5.1  
AL023834-2|CAA19479.2|  217|Caenorhabditis elegans Hypothetical ...    29   5.1  
AF026212-1|AAF99971.1|  807|Caenorhabditis elegans Hypothetical ...    29   6.8  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    29   6.8  

>Z81034-1|CAB02726.1|  194|Caenorhabditis elegans Hypothetical
           protein C15C6.1 protein.
          Length = 194

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = -3

Query: 426 RFLGAVIVHIMLHLV*IFFYSCH*AFLFSFHVFLK---LLCVQNFLPRTNRGNVNKAYFV 256
           RF+  V+   M H++     SC+   +FSF+ F+K   +L + N++  T  G  N A+++
Sbjct: 84  RFVWPVVAISMFHVI----LSCYALVIFSFYFFIKPYYILMISNWMFDTMHGEKNAAFYL 139


>L14429-2|AAP68927.1|  229|Caenorhabditis elegans Hypothetical
           protein ZK652.6b protein.
          Length = 229

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3

Query: 381 KQDVTLYERLQHLRIGEK 434
           K D+ L E LQHLR+GEK
Sbjct: 113 KPDIALKEALQHLRLGEK 130


>L14429-1|AAA28219.2|  575|Caenorhabditis elegans Hypothetical
           protein ZK652.6a protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3

Query: 381 KQDVTLYERLQHLRIGEK 434
           K D+ L E LQHLR+GEK
Sbjct: 459 KPDIALKEALQHLRLGEK 476


>AL023834-2|CAA19479.2|  217|Caenorhabditis elegans Hypothetical
           protein Y32B12A.3 protein.
          Length = 217

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +1

Query: 139 CYYDGTVCQMATYSEEKNV**NKLNQNIY 225
           C +DG+VCQ  T ++E +V  ++ N+ I+
Sbjct: 167 CLWDGSVCQETTRTDESSVAIHEANEKIF 195


>AF026212-1|AAF99971.1|  807|Caenorhabditis elegans Hypothetical
           protein F52G3.3 protein.
          Length = 807

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 333 HEMRKEMLNDKNRRIFKQDVTLYERLQHL 419
           H+ RKE L+ +  RIF+ +V   +RL+HL
Sbjct: 598 HQQRKEKLSAEVGRIFRGNVKSVKRLRHL 626


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
            protein D1007.7 protein.
          Length = 988

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
 Frame = +3

Query: 1095 PGVXPGXXXGAPPVPXLP-XPXXXPPXPLREXXXXXXPPXG 1214
            PGV P     APP P +P  P   PP  +        PP G
Sbjct: 696  PGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMG 736


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,254,980
Number of Sequences: 27780
Number of extensions: 302031
Number of successful extensions: 853
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3432936682
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)