Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_A10
         (1212 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121650-1|AAM51977.1|  354|Drosophila melanogaster LD43819p pro...   310   3e-84
AE014134-3542|AAN11137.1|  354|Drosophila melanogaster CG1416-PC...   310   3e-84
AE014134-3541|AAN11136.1|  354|Drosophila melanogaster CG1416-PB...   310   3e-84
AE014134-3540|AAF57232.2|  354|Drosophila melanogaster CG1416-PA...   310   3e-84
X17551-1|CAA35586.1|  565|Drosophila melanogaster ORF1 for putat...    33   0.59 
DQ087678-1|AAZ78531.1|  305|Drosophila melanogaster CHKov1 protein.    33   0.59 
BT006019-1|AAO74702.1|  458|Drosophila melanogaster GM04721p pro...    30   7.3  
AY075184-1|AAL68054.1|  458|Drosophila melanogaster AT13091p pro...    30   7.3  
AE014298-2408|AAF48614.1|  458|Drosophila melanogaster CG4420-PA...    30   7.3  

>AY121650-1|AAM51977.1|  354|Drosophila melanogaster LD43819p protein.
          Length = 354

 Score =  310 bits (760), Expect = 3e-84
 Identities = 143/270 (52%), Positives = 193/270 (71%), Gaps = 9/270 (3%)
 Frame = +2

Query: 278  MAKWGEGDPRWIVEERPDATNVNNWHWTEKNAGPWSKDRLKELFSDLKIAQNGIVCSITE 457
            MAKWGEGDPRWIVEERPDATNVNNWHWTEKNA PWSKDRL +LF D KI Q+ I C++  
Sbjct: 1    MAKWGEGDPRWIVEERPDATNVNNWHWTEKNATPWSKDRLHQLFQDFKIGQSDIECAVDS 60

Query: 458  VEKVDGEASANNRKGKLIFFYEWDIKLKWEGVLAGGSEKI-KGEIHIPNLSEENDVSEVD 634
            V+K  GEA+ NNRKGKLIFFYEW++ LKW G L   S+ I KG++ IPNLSEEN++++V+
Sbjct: 61   VDKCSGEATVNNRKGKLIFFYEWELVLKWSGKLLKNSKLIHKGKLTIPNLSEENELADVE 120

Query: 635  MTVTIKSNGDEAQRVKAFMHHVGREEIRKQLQEYIRSLKEEFSKGLILPKKGESSVKPDN 814
            +TVTI  + DE++ +K FM++VGR+ +R+QL  YIR LKEE+SK LILPKKG+ +   + 
Sbjct: 121  ITVTIDESNDESETLKQFMYNVGRDRVRQQLASYIRELKEEYSKNLILPKKGDEAGAGNT 180

Query: 815  VSTITSGFN-----KKINMNPIISP---QTNKVGCKLDTKTIELSEKFQCRGQEFYDAMT 970
            V+      N     + I +N  ++    + + +GCKLD +T+ ++E+F C   + Y+A+T
Sbjct: 181  VANFKDANNTRNAAQNIALNSSVAAPRLKNSGIGCKLDVRTLSMTEEFHCSANDLYNALT 240

Query: 971  XIXMVTAFTQGHVKLXPXKXGKXALXGGNV 1060
               MVTAFT+   K+   + G+  L GGNV
Sbjct: 241  KPEMVTAFTRAPAKVDAVRGGEFILYGGNV 270


>AE014134-3542|AAN11137.1|  354|Drosophila melanogaster CG1416-PC,
            isoform C protein.
          Length = 354

 Score =  310 bits (760), Expect = 3e-84
 Identities = 143/270 (52%), Positives = 193/270 (71%), Gaps = 9/270 (3%)
 Frame = +2

Query: 278  MAKWGEGDPRWIVEERPDATNVNNWHWTEKNAGPWSKDRLKELFSDLKIAQNGIVCSITE 457
            MAKWGEGDPRWIVEERPDATNVNNWHWTEKNA PWSKDRL +LF D KI Q+ I C++  
Sbjct: 1    MAKWGEGDPRWIVEERPDATNVNNWHWTEKNATPWSKDRLHQLFQDFKIGQSDIECAVDS 60

Query: 458  VEKVDGEASANNRKGKLIFFYEWDIKLKWEGVLAGGSEKI-KGEIHIPNLSEENDVSEVD 634
            V+K  GEA+ NNRKGKLIFFYEW++ LKW G L   S+ I KG++ IPNLSEEN++++V+
Sbjct: 61   VDKCSGEATVNNRKGKLIFFYEWELVLKWSGKLLKNSKLIHKGKLTIPNLSEENELADVE 120

Query: 635  MTVTIKSNGDEAQRVKAFMHHVGREEIRKQLQEYIRSLKEEFSKGLILPKKGESSVKPDN 814
            +TVTI  + DE++ +K FM++VGR+ +R+QL  YIR LKEE+SK LILPKKG+ +   + 
Sbjct: 121  ITVTIDESNDESETLKQFMYNVGRDRVRQQLASYIRELKEEYSKNLILPKKGDEAGAGNT 180

Query: 815  VSTITSGFN-----KKINMNPIISP---QTNKVGCKLDTKTIELSEKFQCRGQEFYDAMT 970
            V+      N     + I +N  ++    + + +GCKLD +T+ ++E+F C   + Y+A+T
Sbjct: 181  VANFKDANNTRNAAQNIALNSSVAAPRLKNSGIGCKLDVRTLSMTEEFHCSANDLYNALT 240

Query: 971  XIXMVTAFTQGHVKLXPXKXGKXALXGGNV 1060
               MVTAFT+   K+   + G+  L GGNV
Sbjct: 241  KPEMVTAFTRAPAKVDAVRGGEFILYGGNV 270


>AE014134-3541|AAN11136.1|  354|Drosophila melanogaster CG1416-PB,
            isoform B protein.
          Length = 354

 Score =  310 bits (760), Expect = 3e-84
 Identities = 143/270 (52%), Positives = 193/270 (71%), Gaps = 9/270 (3%)
 Frame = +2

Query: 278  MAKWGEGDPRWIVEERPDATNVNNWHWTEKNAGPWSKDRLKELFSDLKIAQNGIVCSITE 457
            MAKWGEGDPRWIVEERPDATNVNNWHWTEKNA PWSKDRL +LF D KI Q+ I C++  
Sbjct: 1    MAKWGEGDPRWIVEERPDATNVNNWHWTEKNATPWSKDRLHQLFQDFKIGQSDIECAVDS 60

Query: 458  VEKVDGEASANNRKGKLIFFYEWDIKLKWEGVLAGGSEKI-KGEIHIPNLSEENDVSEVD 634
            V+K  GEA+ NNRKGKLIFFYEW++ LKW G L   S+ I KG++ IPNLSEEN++++V+
Sbjct: 61   VDKCSGEATVNNRKGKLIFFYEWELVLKWSGKLLKNSKLIHKGKLTIPNLSEENELADVE 120

Query: 635  MTVTIKSNGDEAQRVKAFMHHVGREEIRKQLQEYIRSLKEEFSKGLILPKKGESSVKPDN 814
            +TVTI  + DE++ +K FM++VGR+ +R+QL  YIR LKEE+SK LILPKKG+ +   + 
Sbjct: 121  ITVTIDESNDESETLKQFMYNVGRDRVRQQLASYIRELKEEYSKNLILPKKGDEAGAGNT 180

Query: 815  VSTITSGFN-----KKINMNPIISP---QTNKVGCKLDTKTIELSEKFQCRGQEFYDAMT 970
            V+      N     + I +N  ++    + + +GCKLD +T+ ++E+F C   + Y+A+T
Sbjct: 181  VANFKDANNTRNAAQNIALNSSVAAPRLKNSGIGCKLDVRTLSMTEEFHCSANDLYNALT 240

Query: 971  XIXMVTAFTQGHVKLXPXKXGKXALXGGNV 1060
               MVTAFT+   K+   + G+  L GGNV
Sbjct: 241  KPEMVTAFTRAPAKVDAVRGGEFILYGGNV 270


>AE014134-3540|AAF57232.2|  354|Drosophila melanogaster CG1416-PA,
            isoform A protein.
          Length = 354

 Score =  310 bits (760), Expect = 3e-84
 Identities = 143/270 (52%), Positives = 193/270 (71%), Gaps = 9/270 (3%)
 Frame = +2

Query: 278  MAKWGEGDPRWIVEERPDATNVNNWHWTEKNAGPWSKDRLKELFSDLKIAQNGIVCSITE 457
            MAKWGEGDPRWIVEERPDATNVNNWHWTEKNA PWSKDRL +LF D KI Q+ I C++  
Sbjct: 1    MAKWGEGDPRWIVEERPDATNVNNWHWTEKNATPWSKDRLHQLFQDFKIGQSDIECAVDS 60

Query: 458  VEKVDGEASANNRKGKLIFFYEWDIKLKWEGVLAGGSEKI-KGEIHIPNLSEENDVSEVD 634
            V+K  GEA+ NNRKGKLIFFYEW++ LKW G L   S+ I KG++ IPNLSEEN++++V+
Sbjct: 61   VDKCSGEATVNNRKGKLIFFYEWELVLKWSGKLLKNSKLIHKGKLTIPNLSEENELADVE 120

Query: 635  MTVTIKSNGDEAQRVKAFMHHVGREEIRKQLQEYIRSLKEEFSKGLILPKKGESSVKPDN 814
            +TVTI  + DE++ +K FM++VGR+ +R+QL  YIR LKEE+SK LILPKKG+ +   + 
Sbjct: 121  ITVTIDESNDESETLKQFMYNVGRDRVRQQLASYIRELKEEYSKNLILPKKGDEAGAGNT 180

Query: 815  VSTITSGFN-----KKINMNPIISP---QTNKVGCKLDTKTIELSEKFQCRGQEFYDAMT 970
            V+      N     + I +N  ++    + + +GCKLD +T+ ++E+F C   + Y+A+T
Sbjct: 181  VANFKDANNTRNAAQNIALNSSVAAPRLKNSGIGCKLDVRTLSMTEEFHCSANDLYNALT 240

Query: 971  XIXMVTAFTQGHVKLXPXKXGKXALXGGNV 1060
               MVTAFT+   K+   + G+  L GGNV
Sbjct: 241  KPEMVTAFTRAPAKVDAVRGGEFILYGGNV 270


>X17551-1|CAA35586.1|  565|Drosophila melanogaster ORF1 for putative
           RNA bindingprotein protein.
          Length = 565

 Score = 33.5 bits (73), Expect = 0.59
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 782 KKGESSVKPDNVSTITSGFNKKINMNPIISPQTNKVG 892
           +K ES  K  ++ST+ +G ++ I +   +SPQ NK G
Sbjct: 139 RKEESKQKQKSISTVQTGMDRYIQIKRKLSPQNNKAG 175


>DQ087678-1|AAZ78531.1|  305|Drosophila melanogaster CHKov1 protein.
          Length = 305

 Score = 33.5 bits (73), Expect = 0.59
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 782 KKGESSVKPDNVSTITSGFNKKINMNPIISPQTNKVG 892
           +K ES  K  ++ST+ +G ++ I +   +SPQ NK G
Sbjct: 174 RKEESKQKQKSISTVQTGMDRYIQIKRKLSPQNNKAG 210


>BT006019-1|AAO74702.1|  458|Drosophila melanogaster GM04721p
           protein.
          Length = 458

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +2

Query: 530 IKLKWEGVLAG-GSEKIKGEIHIPNLSEENDVSEVDMTV 643
           I  +W GV  G G++ I G IH+  L  END      TV
Sbjct: 279 IDTRWNGVAKGVGTQPILGRIHMVQLQIENDHLTSSFTV 317


>AY075184-1|AAL68054.1|  458|Drosophila melanogaster AT13091p
           protein.
          Length = 458

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +2

Query: 530 IKLKWEGVLAG-GSEKIKGEIHIPNLSEENDVSEVDMTV 643
           I  +W GV  G G++ I G IH+  L  END      TV
Sbjct: 279 IDTRWNGVAKGVGTQPILGRIHMVQLQIENDHLTSSFTV 317


>AE014298-2408|AAF48614.1|  458|Drosophila melanogaster CG4420-PA
           protein.
          Length = 458

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +2

Query: 530 IKLKWEGVLAG-GSEKIKGEIHIPNLSEENDVSEVDMTV 643
           I  +W GV  G G++ I G IH+  L  END      TV
Sbjct: 279 IDTRWNGVAKGVGTQPILGRIHMVQLQIENDHLTSSFTV 317


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,034,633
Number of Sequences: 53049
Number of extensions: 901851
Number of successful extensions: 2647
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2639
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6437901180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)