Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_A10
         (1212 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81030-6|CAB02710.1|  342|Caenorhabditis elegans Hypothetical pr...   218   6e-57
Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical pr...    32   0.71 
AC024824-3|AAK85501.1|  543|Caenorhabditis elegans Hypothetical ...    32   0.71 
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr...    30   3.8  
Z32683-4|CAA83629.1|  443|Caenorhabditis elegans Hypothetical pr...    29   6.6  

>Z81030-6|CAB02710.1|  342|Caenorhabditis elegans Hypothetical protein
            C01G10.8 protein.
          Length = 342

 Score =  218 bits (533), Expect = 6e-57
 Identities = 115/265 (43%), Positives = 159/265 (60%), Gaps = 4/265 (1%)
 Frame = +2

Query: 278  MAKWGEGDPRWIVEERPDATNVNNWHWTEKNAGPWSKDRLKELFSDLKIAQNGIVCSITE 457
            MAKWGEGDPRWIVEER DATNVNNWHW+EKNA PWS +RL+EL +        IV +I E
Sbjct: 1    MAKWGEGDPRWIVEERADATNVNNWHWSEKNATPWSLNRLRELLTGFSSEDGPIVVTIDE 60

Query: 458  VEKVDGEASANNRKGKLIFFYEWDIKLKWEGVLAGGSEKIKGEIHIPNLSEENDVSEVDM 637
            ++K+DGEA+ANNRK KLIF +EW I+  +   ++G  ++ KG   IPNLS+END SEVD+
Sbjct: 61   IKKIDGEATANNRKAKLIFLFEWVIEGTFIARVSGSEDEYKGTFDIPNLSDENDASEVDV 120

Query: 638  TVTIKSNGDEAQRVKAFMHHVGREEIRKQLQEYIRSLKEEFSKGLILPKKGESSVKPDNV 817
              ++  NG  A +++  ++     +I+  +  YIR LKEEFSKGLILP      VKP  V
Sbjct: 121  NSSLSGNGPMAHQIRQVLNKSFIAKIQDVMGIYIRELKEEFSKGLILP---TDKVKPQVV 177

Query: 818  ST-ITSGFNKKINMNPIISPQTNKVGCK--LDTKTIELSEKFQCRGQEFYDAMTXIXMVT 988
            +T  TS  +K+   N +++ +           TK +  S+ ++      ++A+T    V 
Sbjct: 178  TTGKTSVVDKRQFQNTVVAEKDASTSGNEVFSTKEVSTSDTYKATPDRVFEALTETQFVR 237

Query: 989  AFTQGHVKLXPXK-XGKXALXGGNV 1060
             +T   +     K  G  AL G NV
Sbjct: 238  GWTNNSIGEWNFKEGGSFALFGENV 262


>Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical protein
            F54G8.3 protein.
          Length = 1139

 Score = 32.3 bits (70), Expect = 0.71
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 12/148 (8%)
 Frame = +2

Query: 395  LKELFSDLKIAQNGIVCSITEVEKVDGEASANNRKGKLI---FFYEWDIKLKWEGVLAGG 565
            LK  F D+ +  NG V ++ E + +D   +  N+K K     F+ E++ + + E     G
Sbjct: 675  LKAAFKDIPLTSNGYVSNVGEKDYLDLTFTVENKKEKAYQANFYLEYN-EEELELPQVQG 733

Query: 566  SEKI------KGEIHIPNLSEENDVSEVDMTVTIKSNGDEAQRV-KA--FMHHVGREEIR 718
            S+++      K  +H+P  +  N  S+   T+  K      + + KA  FM HV      
Sbjct: 734  SKRMIAETIGKNIVHLPLGNPMNGASKHQFTIQFKLTRGRTEGIGKALKFMAHV--NSTS 791

Query: 719  KQLQEYIRSLKEEFSKGLILPKKGESSV 802
            ++ +E ++  K E    +I  KK E  +
Sbjct: 792  QETEEELKDNKWEAEVQII--KKAELEI 817


>AC024824-3|AAK85501.1|  543|Caenorhabditis elegans Hypothetical
           protein Y55B1BR.1 protein.
          Length = 543

 Score = 32.3 bits (70), Expect = 0.71
 Identities = 15/62 (24%), Positives = 33/62 (53%)
 Frame = +2

Query: 773 ILPKKGESSVKPDNVSTITSGFNKKINMNPIISPQTNKVGCKLDTKTIELSEKFQCRGQE 952
           +LP++ + + KPD    IT GF +++++ P    + N    ++  + + + +  Q   +E
Sbjct: 149 VLPQRQKPTPKPDKEIRITVGFGEQVDLEPTFICKWNHARLRV-AQEVPVPDLSQASEEE 207

Query: 953 FY 958
           FY
Sbjct: 208 FY 209


>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
            C03D6.4 protein.
          Length = 1390

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 758  FSKGLILPKKGESSVKPDNVSTITSGFNKKINMNPIISPQ-TNKVGCKLDT--KTIELSE 928
            FS G +   K ++ +     ST+T+G    IN +  ISPQ   K   K++T  KT E+ +
Sbjct: 946  FSSGSLFGTKTQTPLVSKEESTLTTGVPSLINSSLSISPQEIEKASSKVETLNKTEEVKD 1005

Query: 929  K 931
            +
Sbjct: 1006 E 1006


>Z32683-4|CAA83629.1|  443|Caenorhabditis elegans Hypothetical
           protein R07E5.6 protein.
          Length = 443

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = +2

Query: 608 EENDVSEVDMTVTIKSNGDEAQRVKAFMHHVGREE-IRKQLQEYIRSLKEEFSK 766
           E+ + ++++MT  IK   DE ++ K     + +EE I+K+++E  +  KEE  K
Sbjct: 240 EKVEKNKMEMTEKIKKK-DEDEKAKKEKERIDKEEKIKKEVEEAEKKKKEEKEK 292


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,515,554
Number of Sequences: 27780
Number of extensions: 485686
Number of successful extensions: 1444
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1444
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3339026560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)