Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_A08
(1223 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 262 2e-69
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 262 2e-69
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 262 2e-69
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 262 2e-69
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 262 2e-69
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 262 2e-69
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 1e-18
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 32 3.7
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 262 bits (641), Expect = 2e-69
Identities = 127/169 (75%), Positives = 148/169 (87%), Gaps = 1/169 (0%)
Frame = +3
Query: 129 ISQALVELETNSDLKAQLRXLYITKAKXIELHN-KXSIIIYVPMPKLKAFQKXQIRLVRE 305
ISQAL+ELE NSDLKAQLR L IT AK IE+ + +III+VP+P+LK+FQK Q+RLVRE
Sbjct: 23 ISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRE 82
Query: 306 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 485
LEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGK
Sbjct: 83 LEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGK 142
Query: 486 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 632
RIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 143 RIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 262 bits (641), Expect = 2e-69
Identities = 127/169 (75%), Positives = 148/169 (87%), Gaps = 1/169 (0%)
Frame = +3
Query: 129 ISQALVELETNSDLKAQLRXLYITKAKXIELHN-KXSIIIYVPMPKLKAFQKXQIRLVRE 305
ISQAL+ELE NSDLKAQLR L IT AK IE+ + +III+VP+P+LK+FQK Q+RLVRE
Sbjct: 21 ISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRE 80
Query: 306 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 485
LEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGK
Sbjct: 81 LEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGK 140
Query: 486 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 632
RIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 141 RIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 189
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 262 bits (641), Expect = 2e-69
Identities = 127/169 (75%), Positives = 148/169 (87%), Gaps = 1/169 (0%)
Frame = +3
Query: 129 ISQALVELETNSDLKAQLRXLYITKAKXIELHN-KXSIIIYVPMPKLKAFQKXQIRLVRE 305
ISQAL+ELE NSDLKAQLR L IT AK IE+ + +III+VP+P+LK+FQK Q+RLVRE
Sbjct: 23 ISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRE 82
Query: 306 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 485
LEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGK
Sbjct: 83 LEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGK 142
Query: 486 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 632
RIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 143 RIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 262 bits (641), Expect = 2e-69
Identities = 127/169 (75%), Positives = 148/169 (87%), Gaps = 1/169 (0%)
Frame = +3
Query: 129 ISQALVELETNSDLKAQLRXLYITKAKXIELHN-KXSIIIYVPMPKLKAFQKXQIRLVRE 305
ISQAL+ELE NSDLKAQLR L IT AK IE+ + +III+VP+P+LK+FQK Q+RLVRE
Sbjct: 23 ISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRE 82
Query: 306 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 485
LEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGK
Sbjct: 83 LEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGK 142
Query: 486 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 632
RIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 143 RIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 262 bits (641), Expect = 2e-69
Identities = 127/169 (75%), Positives = 148/169 (87%), Gaps = 1/169 (0%)
Frame = +3
Query: 129 ISQALVELETNSDLKAQLRXLYITKAKXIELHN-KXSIIIYVPMPKLKAFQKXQIRLVRE 305
ISQAL+ELE NSDLKAQLR L IT AK IE+ + +III+VP+P+LK+FQK Q+RLVRE
Sbjct: 23 ISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRE 82
Query: 306 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 485
LEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGK
Sbjct: 83 LEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGK 142
Query: 486 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 632
RIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 143 RIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 262 bits (641), Expect = 2e-69
Identities = 127/169 (75%), Positives = 148/169 (87%), Gaps = 1/169 (0%)
Frame = +3
Query: 129 ISQALVELETNSDLKAQLRXLYITKAKXIELHN-KXSIIIYVPMPKLKAFQKXQIRLVRE 305
ISQAL+ELE NSDLKAQLR L IT AK IE+ + +III+VP+P+LK+FQK Q+RLVRE
Sbjct: 23 ISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRE 82
Query: 306 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 485
LEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGK
Sbjct: 83 LEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGK 142
Query: 486 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 632
RIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 143 RIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 93.5 bits (222), Expect = 1e-18
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = +3
Query: 414 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 569
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 32.3 bits (70), Expect = 3.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 586 TDWKVSTLCSIVVCWFLSKCTLMSCEPSNLTLMRLPTISAGKTKS 452
T W ++ LCS++ W L CT + P L+ L T+S+ KS
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKS 307
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,467,589
Number of Sequences: 237096
Number of extensions: 2095898
Number of successful extensions: 3591
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3585
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17339562450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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