Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_A08
         (1223 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical pr...   223   3e-58

>Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical
           protein ZC434.2 protein.
          Length = 194

 Score =  223 bits (544), Expect = 3e-58
 Identities = 102/171 (59%), Positives = 137/171 (80%), Gaps = 1/171 (0%)
 Frame = +3

Query: 126 RISQALVELETNSDLKAQLRXLYITKAKXIELHNKXSIIIYVPMPKLKAFQKXQIRLVRE 305
           ++SQAL++LETN D+++QL+ LYI   K +EL NK +IIIYVP+P+LKAF K    LVRE
Sbjct: 22  QVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVPQLKAFHKIHPALVRE 81

Query: 306 LEKKFSGKHVVFVGDRKILPKPSHKTRVA-NKQKRPRSRTLTSVYDAILEDLVFPAEIVG 482
           LEKKF G+ ++ +  R+ILPKP   ++    KQKRPRSRTLT+V+DA L++LV+PAE+VG
Sbjct: 82  LEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVHDAWLDELVYPAEVVG 141

Query: 483 KRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEP 635
           +RIRVKLDG ++ KVHLDK+ QT + HK+  F SVY+KLTG++VTFEFP+P
Sbjct: 142 RRIRVKLDGKKVYKVHLDKSHQTNVGHKIGVFASVYRKLTGKDVTFEFPDP 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,265,331
Number of Sequences: 27780
Number of extensions: 311897
Number of successful extensions: 724
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3380764392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)