Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_A04
         (1196 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798...    29   7.2  
04_04_1249 - 32067644-32067787,32068245-32068346,32068415-320684...    29   7.2  
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458...    29   9.6  
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565...    29   9.6  

>09_04_0087 +
           14476539-14476675,14478876-14479635,14479720-14479871,
           14479958-14480024,14480632-14480831,14480915-14481068,
           14481585-14481669,14481766-14481857,14482575-14482766,
           14482867-14482992,14483072-14483125,14483494-14483550,
           14484509-14484606,14484703-14485038,14485116-14485203,
           14486891-14487016,14487082-14487138,14488054-14488133,
           14488228-14488270,14488948-14489034,14489331-14489420,
           14489996-14490054,14490141-14490231,14490330-14490495,
           14490662-14490755,14491787-14492909
          Length = 1537

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +2

Query: 434 KDNAKFKED--ARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLK 571
           KDN K KE      E+EK K K D    +     E  +K E  EEK K
Sbjct: 232 KDNEKEKEQLMGTDEKEKEKEKEDENEEEKLEEEEKKDKEEKLEEKEK 279



 Score = 28.7 bits (61), Expect = 9.6
 Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = +2

Query: 434 KDNAKFKEDARLEREKLKTKLDSE-NPQDANMSEPSNKAESSEEKLKALYGKDWQRMCAL 610
           KDN K KED   E +K   K   +    D    E   + E+ EEKL+    KD +     
Sbjct: 217 KDNEKEKEDKEEETKKDNEKEKEQLMGTDEKEKEKEKEDENEEEKLEEEEKKDKEEKLE- 275

Query: 611 EMSLECEFLDSCERDK 658
           E   E E  +  E+DK
Sbjct: 276 EKEKENEEENGNEKDK 291


>04_04_1249 -
           32067644-32067787,32068245-32068346,32068415-32068438,
           32068439-32068543,32068625-32068729,32068885-32068966,
           32069254-32069456,32069534-32069692,32070045-32070154,
           32070264-32070405,32070544-32070690,32070773-32070847,
           32070923-32071132,32071223-32071426,32071514-32071633,
           32071743-32071852,32072033-32072177,32072266-32072499,
           32072611-32072646
          Length = 818

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +2

Query: 455 EDARL-EREKLKTKLDSENPQDANMSEPSNKAESSEEKLKALYGKDWQRMCALEMSLECE 631
           ED  L E+EKL++ +D+EN Q A +     +  S  E+LKA +    ++  +LE S   E
Sbjct: 114 EDGYLVEQEKLRSTMDAENAQHAKLEA---QLSSDLEELKAAHLNLTRQCDSLEESFNKE 170

Query: 632 FLD 640
             D
Sbjct: 171 KAD 173


>08_01_0527 +
           4580599-4580818,4580933-4581806,4581891-4581955,
           4582055-4582110,4582955-4583058,4583310-4583382,
           4583474-4583654,4584537-4584622
          Length = 552

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +2

Query: 452 KEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKALYGKDWQRM 601
           KE   +   + +T+ DSE PQD  +S P  K     E+ K L    W+R+
Sbjct: 221 KESQDISPPRRRTRHDSEEPQD--LSPPRRKGRHDSEEPKDLL-PPWRRV 267


>03_05_0754 +
           27452203-27452242,27452360-27455611,27456480-27456533,
           27456774-27456872,27456948-27457012,27457476-27457575,
           27458326-27458408,27458494-27458569,27458920-27459698
          Length = 1515

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +2

Query: 455 EDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKALYGK 586
           E    ERE+++ +LD+ N  +A+      K ESSEE+ K L+ K
Sbjct: 518 EHMEKEREEMQRQLDTYNLDNASRDVHCLKGESSEEE-KGLHEK 560


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,267,041
Number of Sequences: 37544
Number of extensions: 342625
Number of successful extensions: 811
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3654850728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)