Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_A04
         (1196 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    25   3.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   4.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   5.8  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          24   7.6  

>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 25.4 bits (53), Expect = 3.3
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 491 KLDSENPQDANMSEPSNKAESSEEKLKALYGKDWQRMCALE 613
           KL ++   D+N S+PS+     EEK      K+ Q +  LE
Sbjct: 38  KLFTQGSADSNYSQPSSDLSLDEEKESLRREKERQALGQLE 78


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 4.4
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +2

Query: 746  NDGCGSYRLSVRNIFLCLFFNNAIIVQ 826
            +DGC  Y ++ + I++CL  ++A+ ++
Sbjct: 1899 SDGCAVYEVAYQVIWICLVEDSALFLR 1925


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 5.8
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -3

Query: 651  LSQESKNSH--SSDISKAHILCQSFPYKAFNFSSE 553
            ++Q    SH  S  ++KAH  C+ FPY    ++++
Sbjct: 1759 ITQVHGTSHVMSGMVAKAHPSCEGFPYSRTIYAND 1793


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 13/55 (23%), Positives = 28/55 (50%)
 Frame = +2

Query: 170 SWAENFTTAATWQLKHQIAYWKSKAKALEYENKLLHDIIKKNYTSDLPIQEQKVK 334
           +W   + T    +LK ++   + ++K LE   + L + + KN+   +   E+K+K
Sbjct: 23  TWVMVYRTEKYQKLKGEV---EKQSKKLEKRKETLGESLDKNHKKKIERDEEKLK 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 874,103
Number of Sequences: 2352
Number of extensions: 15607
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 135704004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)