Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_A04
(1196 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ224033-1|ABB46495.1| 242|Homo sapiens Gemin8 protein. 42 0.006
CR457241-1|CAG33522.1| 242|Homo sapiens FLJ20514 protein. 42 0.006
BC020785-1|AAH20785.1| 242|Homo sapiens gem (nuclear organelle)... 42 0.006
BC014324-1|AAH14324.1| 242|Homo sapiens gem (nuclear organelle)... 42 0.006
BC003607-1|AAH03607.1| 242|Homo sapiens gem (nuclear organelle)... 42 0.006
AK125062-1|BAC86038.1| 343|Homo sapiens protein ( Homo sapiens ... 42 0.006
AK000521-1|BAA91227.1| 242|Homo sapiens protein ( Homo sapiens ... 42 0.006
BC031242-1|AAH31242.1| 446|Homo sapiens coiled-coil domain cont... 35 0.51
AJ580807-1|CAE45342.1| 529|Homo sapiens mutated in bladder canc... 35 0.51
BC024201-1|AAH24201.1| 737|Homo sapiens prospero-related homeob... 33 1.6
AL606537-1|CAI15309.1| 745|Homo sapiens prospero homeobox 1 pro... 33 1.6
U44060-1|AAC50656.1| 736|Homo sapiens homeodomain protein protein. 33 2.7
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 33 2.7
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 33 2.7
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 33 2.7
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun... 31 8.3
D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein prot... 31 8.3
BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain cont... 31 8.3
BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein. 31 8.3
BC060037-1|AAH60037.1| 622|Homo sapiens CCDC88A protein protein. 31 8.3
BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for IM... 31 8.3
AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein. 31 8.3
AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein. 31 8.3
AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein... 31 8.3
>DQ224033-1|ABB46495.1| 242|Homo sapiens Gemin8 protein.
Length = 242
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Frame = +2
Query: 425 QFLKDNAKFKEDAR----LEREKLKTKLDSENPQDAN----MSEPSNK-AESSEEKLKAL 577
Q+ + + +E+ R L+ E+L + +++++ N + P+ + E + ++K L
Sbjct: 145 QYFAETERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRL 204
Query: 578 YGKDWQRMCALEMSLECEFLDSCERDKPMHWPNIP 682
YG ++ A+E +++ F C+R +P +WP IP
Sbjct: 205 YGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIP 239
>CR457241-1|CAG33522.1| 242|Homo sapiens FLJ20514 protein.
Length = 242
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Frame = +2
Query: 425 QFLKDNAKFKEDAR----LEREKLKTKLDSENPQDAN----MSEPSNK-AESSEEKLKAL 577
Q+ + + +E+ R L+ E+L + +++++ N + P+ + E + ++K L
Sbjct: 145 QYFAETERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRL 204
Query: 578 YGKDWQRMCALEMSLECEFLDSCERDKPMHWPNIP 682
YG ++ A+E +++ F C+R +P +WP IP
Sbjct: 205 YGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIP 239
>BC020785-1|AAH20785.1| 242|Homo sapiens gem (nuclear organelle)
associated protein 8 protein.
Length = 242
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Frame = +2
Query: 425 QFLKDNAKFKEDAR----LEREKLKTKLDSENPQDAN----MSEPSNK-AESSEEKLKAL 577
Q+ + + +E+ R L+ E+L + +++++ N + P+ + E + ++K L
Sbjct: 145 QYFAETERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRL 204
Query: 578 YGKDWQRMCALEMSLECEFLDSCERDKPMHWPNIP 682
YG ++ A+E +++ F C+R +P +WP IP
Sbjct: 205 YGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIP 239
>BC014324-1|AAH14324.1| 242|Homo sapiens gem (nuclear organelle)
associated protein 8 protein.
Length = 242
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Frame = +2
Query: 425 QFLKDNAKFKEDAR----LEREKLKTKLDSENPQDAN----MSEPSNK-AESSEEKLKAL 577
Q+ + + +E+ R L+ E+L + +++++ N + P+ + E + ++K L
Sbjct: 145 QYFAETERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRL 204
Query: 578 YGKDWQRMCALEMSLECEFLDSCERDKPMHWPNIP 682
YG ++ A+E +++ F C+R +P +WP IP
Sbjct: 205 YGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIP 239
>BC003607-1|AAH03607.1| 242|Homo sapiens gem (nuclear organelle)
associated protein 8 protein.
Length = 242
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Frame = +2
Query: 425 QFLKDNAKFKEDAR----LEREKLKTKLDSENPQDAN----MSEPSNK-AESSEEKLKAL 577
Q+ + + +E+ R L+ E+L + +++++ N + P+ + E + ++K L
Sbjct: 145 QYFAETERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRL 204
Query: 578 YGKDWQRMCALEMSLECEFLDSCERDKPMHWPNIP 682
YG ++ A+E +++ F C+R +P +WP IP
Sbjct: 205 YGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIP 239
>AK125062-1|BAC86038.1| 343|Homo sapiens protein ( Homo sapiens
cDNA FLJ43072 fis, clone BRTHA3010366. ).
Length = 343
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Frame = +2
Query: 425 QFLKDNAKFKEDAR----LEREKLKTKLDSENPQDAN----MSEPSNK-AESSEEKLKAL 577
Q+ + + +E+ R L+ E+L + +++++ N + P+ + E + ++K L
Sbjct: 246 QYFAETERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRL 305
Query: 578 YGKDWQRMCALEMSLECEFLDSCERDKPMHWPNIP 682
YG ++ A+E +++ F C+R +P +WP IP
Sbjct: 306 YGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIP 340
>AK000521-1|BAA91227.1| 242|Homo sapiens protein ( Homo sapiens
cDNA FLJ20514 fis, clone KAT09756. ).
Length = 242
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Frame = +2
Query: 425 QFLKDNAKFKEDAR----LEREKLKTKLDSENPQDAN----MSEPSNK-AESSEEKLKAL 577
Q+ + + +E+ R L+ E+L + +++++ N + P+ + E + ++K L
Sbjct: 145 QYFAETERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRL 204
Query: 578 YGKDWQRMCALEMSLECEFLDSCERDKPMHWPNIP 682
YG ++ A+E +++ F C+R +P +WP IP
Sbjct: 205 YGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIP 239
>BC031242-1|AAH31242.1| 446|Homo sapiens coiled-coil domain
containing 112 protein.
Length = 446
Score = 35.1 bits (77), Expect = 0.51
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 452 KEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKALYGKDWQRMCALEMSLEC 628
K+ R E KLK K D+ N E + K + + K + L + W++ ++EMS++C
Sbjct: 232 KQQKREEIFKLKEKADNTPVLFHNKQEDNQKQKEEQRKKQKLAVEAWKKQKSIEMSMKC 290
>AJ580807-1|CAE45342.1| 529|Homo sapiens mutated in bladder cancer
1 protein.
Length = 529
Score = 35.1 bits (77), Expect = 0.51
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 452 KEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKALYGKDWQRMCALEMSLEC 628
K+ R E KLK K D+ N E + K + + K + L + W++ ++EMS++C
Sbjct: 315 KQQKREEIFKLKEKADNTPVLFHNKQEDNQKQKEEQRKKQKLAVEAWKKQKSIEMSMKC 373
>BC024201-1|AAH24201.1| 737|Homo sapiens prospero-related homeobox
1 protein.
Length = 737
Score = 33.5 bits (73), Expect = 1.6
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 425 QFLKDNAKFKEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKALYGKDWQRMC 604
Q L+D K + + ++ DSEN +D N+SE S ++E + + + G+ MC
Sbjct: 241 QQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 300
Query: 605 ALE 613
L+
Sbjct: 301 ELD 303
>AL606537-1|CAI15309.1| 745|Homo sapiens prospero homeobox 1
protein.
Length = 745
Score = 33.5 bits (73), Expect = 1.6
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 425 QFLKDNAKFKEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKALYGKDWQRMC 604
Q L+D K + + ++ DSEN +D N+SE S ++E + + + G+ MC
Sbjct: 241 QQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 300
Query: 605 ALE 613
L+
Sbjct: 301 ELD 303
>U44060-1|AAC50656.1| 736|Homo sapiens homeodomain protein protein.
Length = 736
Score = 32.7 bits (71), Expect = 2.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 497 DSENPQDANMSEPSNKAESSEEKLKALYGKDWQRMCALE 613
DSEN +D N+SE S ++E + + + G+ MC L+
Sbjct: 265 DSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMCELD 303
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 32.7 bits (71), Expect = 2.7
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 431 LKDNAKFKEDARLEREKLKTKL-DSENPQDANMSEPSNKAESSEEKLKA 574
LK++AK E ++E++K+ + + E PQ+ + EP KAE EEK A
Sbjct: 809 LKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAE--EEKAPA 855
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 32.7 bits (71), Expect = 2.7
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 431 LKDNAKFKEDARLEREKLKTKL-DSENPQDANMSEPSNKAESSEEKLKA 574
LK++AK E ++E++K+ + + E PQ+ + EP KAE EEK A
Sbjct: 809 LKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAE--EEKAPA 855
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 32.7 bits (71), Expect = 2.7
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 431 LKDNAKFKEDARLEREKLKTKL-DSENPQDANMSEPSNKAESSEEKLKA 574
LK++AK E ++E++K+ + + E PQ+ + EP KAE EEK A
Sbjct: 817 LKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAE--EEKAPA 863
>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
protein.
Length = 1020
Score = 31.1 bits (67), Expect = 8.3
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 431 LKDNAKFKEDARLEREKLKTKL-DSENPQDANMSEPSNKAESSEEKLKA 574
LK +AK E ++E++K+ + + E PQ+ + EP KAE EEK A
Sbjct: 803 LKADAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAE--EEKAPA 849
>D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein
protein.
Length = 709
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/52 (30%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = +2
Query: 191 TAATWQLKHQIAYWKSKAKALEYENKLLHDIIKKNYT--SDLPIQEQKVKKE 340
T ++ + + QI+ +++ K +E ENK+LH+ IK+ + S + +++++KKE
Sbjct: 491 TVSSLRQRSQISA-EARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKE 541
>BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain
containing 88A protein.
Length = 1843
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/52 (30%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = +2
Query: 191 TAATWQLKHQIAYWKSKAKALEYENKLLHDIIKKNYT--SDLPIQEQKVKKE 340
T ++ + + QI+ +++ K +E ENK+LH+ IK+ + S + +++++KKE
Sbjct: 566 TVSSLRQRSQISA-EARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKE 616
>BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein.
Length = 887
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/52 (30%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = +2
Query: 191 TAATWQLKHQIAYWKSKAKALEYENKLLHDIIKKNYT--SDLPIQEQKVKKE 340
T ++ + + QI+ +++ K +E ENK+LH+ IK+ + S + +++++KKE
Sbjct: 563 TVSSLRQRSQISA-EARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKE 613
>BC060037-1|AAH60037.1| 622|Homo sapiens CCDC88A protein protein.
Length = 622
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/56 (28%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = +2
Query: 191 TAATWQLKHQIAYWKSKAKALEYENKLLHDIIKKNYT--SDLPIQEQKVKKEQSLK 352
T ++ + + QI+ +++ K +E ENK+LH+ IK+ + S + +++++KK++ K
Sbjct: 566 TVSSLRQRSQISA-EARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKKKKKK 620
>BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for
IMAGE:3866238) protein.
Length = 358
Score = 31.1 bits (67), Expect = 8.3
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 431 LKDNAKFKEDARLEREKLKTKL-DSENPQDANMSEPSNKAESSEEKLKA 574
+K+ AK E ++E++K+ + + E PQ+ + EP KAE EEK A
Sbjct: 141 VKEEAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAE--EEKAPA 187
>AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein.
Length = 742
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/52 (30%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = +2
Query: 191 TAATWQLKHQIAYWKSKAKALEYENKLLHDIIKKNYT--SDLPIQEQKVKKE 340
T ++ + + QI+ +++ K +E ENK+LH+ IK+ + S + +++++KKE
Sbjct: 491 TVSSLRQRSQISA-EARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKE 541
>AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein.
Length = 1870
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/52 (30%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = +2
Query: 191 TAATWQLKHQIAYWKSKAKALEYENKLLHDIIKKNYT--SDLPIQEQKVKKE 340
T ++ + + QI+ +++ K +E ENK+LH+ IK+ + S + +++++KKE
Sbjct: 566 TVSSLRQRSQISA-EARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKE 616
>AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein
protein.
Length = 1843
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/52 (30%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = +2
Query: 191 TAATWQLKHQIAYWKSKAKALEYENKLLHDIIKKNYT--SDLPIQEQKVKKE 340
T ++ + + QI+ +++ K +E ENK+LH+ IK+ + S + +++++KKE
Sbjct: 566 TVSSLRQRSQISA-EARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKE 616
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,234,952
Number of Sequences: 237096
Number of extensions: 2024451
Number of successful extensions: 6432
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6421
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16844146380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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