Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_A04
         (1196 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043693-10|AAL02456.1|  183|Caenorhabditis elegans Hypothetical...    31   1.6  
AL021473-1|CAA16305.1|  570|Caenorhabditis elegans Hypothetical ...    30   2.8  
AF106576-1|AAC78177.2|  664|Caenorhabditis elegans Hypothetical ...    30   2.8  
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ...    30   3.7  
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical...    29   6.5  
Z71262-5|CAA95818.1|  606|Caenorhabditis elegans Hypothetical pr...    29   8.6  
AC024211-1|AAF36065.1|  252|Caenorhabditis elegans Hypothetical ...    29   8.6  

>AF043693-10|AAL02456.1|  183|Caenorhabditis elegans Hypothetical
           protein C34B2.11 protein.
          Length = 183

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = +2

Query: 434 KDNAKFKEDARLEREKLKTKLDSENPQ-DANMSEPSNKAESSEEKLKALYGKDWQRMCAL 610
           K+  + +ED ++E      +  S++ + D+ M E S+ A    ++L +       R C +
Sbjct: 29  KEKPQEEEDGKVEESVKSARFQSKDSEKDSKMME-SDSAVFEIDELNSTIAPSSSRQCIV 87

Query: 611 EMSLECEFLDSCERDKP 661
           E  LEC       + KP
Sbjct: 88  EADLECAVTAKKPKKKP 104


>AL021473-1|CAA16305.1|  570|Caenorhabditis elegans Hypothetical
           protein Y20C6A.2 protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 548 ESSEEKLKALYGKDWQRMCALEMSLECEFLD 640
           E  + K ++L G +W R CA+  S +C+ +D
Sbjct: 399 EFKDIKFESLNGLEWARRCAMNFSRQCDEVD 429


>AF106576-1|AAC78177.2|  664|Caenorhabditis elegans Hypothetical
           protein W07E6.1 protein.
          Length = 664

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 440 NAKFKEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEK 565
           NAK  +   +E+EK K    S+N ++   +E S  ++  EEK
Sbjct: 511 NAKMSKQGVMEKEKEKAAQKSQNKKNKAEAEASESSDDEEEK 552


>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
            protein Y108G3AL.7 protein.
          Length = 1192

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +2

Query: 554  SEEKLKALYGKDWQRMCALEMSLEC--EFLDSCERDKPMHWPNIP 682
            S +KL+A YG +W R  A+E + +C  E +D     +    P+ P
Sbjct: 979  SGQKLRAFYGDEWFRANAIEDATDCTDEIMDIMLAHQDFFTPDTP 1023


>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
            protein Y39B6A.30 protein.
          Length = 1408

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/60 (25%), Positives = 32/60 (53%)
 Frame = +2

Query: 452  KEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKALYGKDWQRMCALEMSLECE 631
            +E  + EREK+K + +    ++  +     K ++ EEK+K    ++ +++ A E  L+ E
Sbjct: 913  EERVKAEREKVKKEEERLKAEEEKVKVEKEKVKAEEEKVKVEKERNKEKVKAEEERLKAE 972


>Z71262-5|CAA95818.1|  606|Caenorhabditis elegans Hypothetical
           protein F22D6.6 protein.
          Length = 606

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +2

Query: 458 DARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKALYGKDWQRMCALEMS--LECE 631
           D      K +  L +E  Q     +    A  +  + KA+Y  +WQR+  +E     E  
Sbjct: 414 DTYYSNPKNRKPLKAEEIQSMRKEKRDVFAVCAVNEEKAMYTGEWQRVLIVECDTFAEVR 473

Query: 632 FLDSCERD 655
           FLDS  RD
Sbjct: 474 FLDSGGRD 481


>AC024211-1|AAF36065.1|  252|Caenorhabditis elegans Hypothetical
           protein Y76B12C.4 protein.
          Length = 252

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 425 QFLKDNAKFKEDARL-EREKLKTKLDSENPQDANMSEPSNKAESSEEK 565
           + LK     K++ +L +RE+LKT+   ++ +  N + PS + E S  K
Sbjct: 157 EILKIKKALKKEKKLRDRERLKTEKIDKSTETKNSTTPSTEKEKSSMK 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,373,498
Number of Sequences: 27780
Number of extensions: 347166
Number of successful extensions: 1088
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3286854270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)