Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_A02
(1294 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.11
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.11
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.11
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 31 1.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 3.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 3.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 3.1
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 29 5.4
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 29 5.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 7.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 7.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 7.2
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.11
Identities = 34/157 (21%), Positives = 46/157 (29%), Gaps = 1/157 (0%)
Frame = -1
Query: 709 KRXXPXGFPXPDRGAXXXXSXXGGXXXGKXPXXRPXGGVRPXAXPSPXXXFPGXTPEXGG 530
++ P G P P G P R + P P P P GG
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP-PPPPAGG 287
Query: 529 XPKYPPXKNRXPAXXPKXRGXGIXXXXTXXXPQXX-TAXPRGXAQSXKPXKPXXRPPEPE 353
P PP + P P RG + PQ + P G P + + PE
Sbjct: 288 SP--PPPRAGSPPPPPPPRGS--PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS 343
Query: 352 XKXXKPTXGGXXXGAXXKXGPXXAKXPXKXXQKXTRG 242
P G G + GP + ++ RG
Sbjct: 344 PPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRG 380
Score = 31.5 bits (68), Expect = 1.3
Identities = 37/184 (20%), Positives = 44/184 (23%)
Frame = -2
Query: 1092 PXXXGPPPPPKKXXXXXXPKKTPXPPXNPXXPXGXXPXXPKXXXXXXGXXXXXXXXPXKG 913
P G PPPP+ P +P PP P G P P+ P G
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPP-----PAGGSPPPPRAGSPP--PPPPPRGSPPTG 310
Query: 912 XXXXXXPGXXXKTPXXGXXPTPXXXNPXXGXXRKPPXSXXXXXXXXXRXPXGRNXKGHEG 733
G G P P P S R P G K E
Sbjct: 311 SLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEE 370
Query: 732 XFRGKXXXKXXXXXXXXXXXXXXXXXKVXXGAXPXGKXQXXGPXXGCXPXXAXPPXXXFR 553
+ + P G + P G P + P R
Sbjct: 371 SSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRR--SPPTGSPPTGSPPTGRPPR 428
Query: 552 GXPP 541
G PP
Sbjct: 429 GSPP 432
Score = 29.1 bits (62), Expect = 7.2
Identities = 25/101 (24%), Positives = 28/101 (27%), Gaps = 5/101 (4%)
Frame = -2
Query: 1092 PXXXGPPPPPKKXXXXXXPKKTPXPP---XNPXXPXGXXPXXPKXXXXXXGXXXXXXXXP 922
P PPPPP K +P PP +P P P P P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 921 XKGXXXXXXPGXXXKTPXXGXXPTPXXXN--PXXGXXRKPP 805
G P +P G P P P G PP
Sbjct: 293 RAGSPPPPPP--PRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.11
Identities = 34/157 (21%), Positives = 46/157 (29%), Gaps = 1/157 (0%)
Frame = -1
Query: 709 KRXXPXGFPXPDRGAXXXXSXXGGXXXGKXPXXRPXGGVRPXAXPSPXXXFPGXTPEXGG 530
++ P G P P G P R + P P P P GG
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP-PPPPAGG 308
Query: 529 XPKYPPXKNRXPAXXPKXRGXGIXXXXTXXXPQXX-TAXPRGXAQSXKPXKPXXRPPEPE 353
P PP + P P RG + PQ + P G P + + PE
Sbjct: 309 SP--PPPRAGSPPPPPPPRGS--PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS 364
Query: 352 XKXXKPTXGGXXXGAXXKXGPXXAKXPXKXXQKXTRG 242
P G G + GP + ++ RG
Sbjct: 365 PPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRG 401
Score = 31.5 bits (68), Expect = 1.3
Identities = 37/184 (20%), Positives = 44/184 (23%)
Frame = -2
Query: 1092 PXXXGPPPPPKKXXXXXXPKKTPXPPXNPXXPXGXXPXXPKXXXXXXGXXXXXXXXPXKG 913
P G PPPP+ P +P PP P G P P+ P G
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPP-----PAGGSPPPPRAGSPP--PPPPPRGSPPTG 331
Query: 912 XXXXXXPGXXXKTPXXGXXPTPXXXNPXXGXXRKPPXSXXXXXXXXXRXPXGRNXKGHEG 733
G G P P P S R P G K E
Sbjct: 332 SLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEE 391
Query: 732 XFRGKXXXKXXXXXXXXXXXXXXXXXKVXXGAXPXGKXQXXGPXXGCXPXXAXPPXXXFR 553
+ + P G + P G P + P R
Sbjct: 392 SSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRR--SPPTGSPPTGSPPTGRPPR 449
Query: 552 GXPP 541
G PP
Sbjct: 450 GSPP 453
Score = 29.1 bits (62), Expect = 7.2
Identities = 25/101 (24%), Positives = 28/101 (27%), Gaps = 5/101 (4%)
Frame = -2
Query: 1092 PXXXGPPPPPKKXXXXXXPKKTPXPP---XNPXXPXGXXPXXPKXXXXXXGXXXXXXXXP 922
P PPPPP K +P PP +P P P P P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 921 XKGXXXXXXPGXXXKTPXXGXXPTPXXXN--PXXGXXRKPP 805
G P +P G P P P G PP
Sbjct: 314 RAGSPPPPPP--PRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.11
Identities = 34/157 (21%), Positives = 46/157 (29%), Gaps = 1/157 (0%)
Frame = -1
Query: 709 KRXXPXGFPXPDRGAXXXXSXXGGXXXGKXPXXRPXGGVRPXAXPSPXXXFPGXTPEXGG 530
++ P G P P G P R + P P P P GG
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP-PPPPAGG 293
Query: 529 XPKYPPXKNRXPAXXPKXRGXGIXXXXTXXXPQXX-TAXPRGXAQSXKPXKPXXRPPEPE 353
P PP + P P RG + PQ + P G P + + PE
Sbjct: 294 SP--PPPRAGSPPPPPPPRGS--PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS 349
Query: 352 XKXXKPTXGGXXXGAXXKXGPXXAKXPXKXXQKXTRG 242
P G G + GP + ++ RG
Sbjct: 350 PPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRG 386
Score = 31.5 bits (68), Expect = 1.3
Identities = 37/184 (20%), Positives = 44/184 (23%)
Frame = -2
Query: 1092 PXXXGPPPPPKKXXXXXXPKKTPXPPXNPXXPXGXXPXXPKXXXXXXGXXXXXXXXPXKG 913
P G PPPP+ P +P PP P G P P+ P G
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPP-----PAGGSPPPPRAGSPP--PPPPPRGSPPTG 316
Query: 912 XXXXXXPGXXXKTPXXGXXPTPXXXNPXXGXXRKPPXSXXXXXXXXXRXPXGRNXKGHEG 733
G G P P P S R P G K E
Sbjct: 317 SLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEE 376
Query: 732 XFRGKXXXKXXXXXXXXXXXXXXXXXKVXXGAXPXGKXQXXGPXXGCXPXXAXPPXXXFR 553
+ + P G + P G P + P R
Sbjct: 377 SSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRR--SPPTGSPPTGSPPTGRPPR 434
Query: 552 GXPP 541
G PP
Sbjct: 435 GSPP 438
Score = 29.1 bits (62), Expect = 7.2
Identities = 25/101 (24%), Positives = 28/101 (27%), Gaps = 5/101 (4%)
Frame = -2
Query: 1092 PXXXGPPPPPKKXXXXXXPKKTPXPP---XNPXXPXGXXPXXPKXXXXXXGXXXXXXXXP 922
P PPPPP K +P PP +P P P P P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 921 XKGXXXXXXPGXXXKTPXXGXXPTPXXXN--PXXGXXRKPP 805
G P +P G P P P G PP
Sbjct: 299 RAGSPPPPPP--PRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 31.1 bits (67), Expect = 1.8
Identities = 34/128 (26%), Positives = 38/128 (29%), Gaps = 4/128 (3%)
Frame = -1
Query: 889 GXXXNPGXGGXTHPGXXKPXXGXXXKTPRXPXGXKXXGXPXXAXXEXKRP---RGXXQGE 719
G NPG G HPG G + P P G G E RP G+
Sbjct: 159 GDAGNPGQSG--HPGRNGNDGGVGPQGPPGPPGNNGEGGRDGPRGEQGRPAISTPALPGD 216
Query: 718 XXXK-RXXPXGFPXPDRGAXXXXSXXGGXXXGKXPXXRPXGGVRPXAXPSPXXXFPGXTP 542
P G P D+G G P G A P+ PG
Sbjct: 217 PGAPGEPGPSGLPG-DQGQAGRPGSDGAPGPQGPPGPPGQQGHPGQAGPAGQPGQPGPQG 275
Query: 541 EXGGXPKY 518
E G PKY
Sbjct: 276 ERGICPKY 283
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 1092 PXXXGPPPPPKKXXXXXXPKKTPXPPXNPXXPXGXXPXXP 973
P GPPPPP P P P P G P P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -1
Query: 628 GKXPXXRPXGGVRPXAXPSPXXXFPGXTPE-XGGXPKYPPXKNRXPAXXP 482
G P P GG+ P P PG P GG P PP P P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -2
Query: 1092 PXXXGPPPPPKKXXXXXXPKKTPXPPXNPXXPXGXXPXXP 973
P GPPPPP P + PP P P G P P
Sbjct: 737 PITGGPPPPP---PPGGLPPISGGPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 1092 PXXXGPPPPPKKXXXXXXPKKTPXPPXNPXXPXGXXPXXP 973
P GPPPPP P P P P G P P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -1
Query: 628 GKXPXXRPXGGVRPXAXPSPXXXFPGXTPE-XGGXPKYPPXKNRXPAXXP 482
G P P GG+ P P PG P GG P PP P P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -2
Query: 1092 PXXXGPPPPPKKXXXXXXPKKTPXPPXNPXXPXGXXPXXP 973
P GPPPPP P + PP P P G P P
Sbjct: 737 PITGGPPPPP---PPGGLPPISGGPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 1092 PXXXGPPPPPKKXXXXXXPKKTPXPPXNPXXPXGXXPXXP 973
P GPPPPP P P P P G P P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 330
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -1
Query: 628 GKXPXXRPXGGVRPXAXPSPXXXFPGXTPE-XGGXPKYPPXKNRXPAXXP 482
G P P GG+ P P PG P GG P PP P P
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -2
Query: 1092 PXXXGPPPPPKKXXXXXXPKKTPXPPXNPXXPXGXXPXXP 973
P GPPPPP P + PP P P G P P
Sbjct: 320 PITGGPPPPP---PPGGLPPISGGPPPPPPPPGGCPPPPP 356
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical protein
R07E3.6 protein.
Length = 927
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +2
Query: 992 PXGXXGFXGGXGVFLGXXXXXXFFGGGGGP 1081
P G GF GG G F G FGGG GP
Sbjct: 874 PFGGGGFGGGGGGF-GGGNRGNGFGGGSGP 902
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 619 PXXRPXGGVRPXAXPSPXXXFPGXTPEXGGXPKYP 515
P P GG + P+P FP P G PK+P
Sbjct: 87 PTPNPYGGYGA-SQPAPPEKFPDGIPNGGNQPKFP 120
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 619 PXXRPXGGVRPXAXPSPXXXFPGXTPEXGGXPKYP 515
P P GG + P+P FP P G PK+P
Sbjct: 87 PTPNPYGGYGA-SQPAPPEKFPDGIPNGGNQPKFP 120
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 7.2
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -2
Query: 1077 PPPPPKKXXXXXXPKKTPXPPXNPXXPXGXXPXXP 973
PPPPP + P PP P G P P
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 7.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -2
Query: 1077 PPPPPKKXXXXXXPKKTPXPPXNPXXPXGXXP 982
PPPPP+K P PP P P P
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSP 155
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 7.2
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -2
Query: 1077 PPPPPKKXXXXXXPKKTPXPPXNPXXPXGXXPXXP 973
PPPPP + P PP P G P P
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,924,624
Number of Sequences: 27780
Number of extensions: 167133
Number of successful extensions: 1003
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3620756926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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