SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_P21
         (1176 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC119683-1|AAI19684.1|  449|Homo sapiens required for meiotic nu...    51   9e-06
BC106065-1|AAI06066.1|  449|Homo sapiens required for meiotic nu...    51   9e-06
AL590543-1|CAI10940.1|  449|Homo sapiens required for meiotic nu...    51   9e-06
AL590413-8|CAI13595.1|  211|Homo sapiens required for meiotic nu...    51   9e-06
AL590413-7|CAI13594.1|  238|Homo sapiens required for meiotic nu...    51   9e-06
AL590413-1|CAI13588.1|  449|Homo sapiens required for meiotic nu...    51   9e-06
AK000634-1|BAA91299.1|  449|Homo sapiens protein ( Homo sapiens ...    51   9e-06

>BC119683-1|AAI19684.1|  449|Homo sapiens required for meiotic
           nuclear division 1 homolog (S. cerevisiae) protein.
          Length = 449

 Score = 50.8 bits (116), Expect = 9e-06
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
 Frame = +3

Query: 588 IFFFKEGAVVFWNCXELEXXXXREFVKPYELESYPRXVIEKXREIMTYIYQPNSXXCHLQ 767
           IFFF+EGA VFWN  +       + ++ +E++ Y   ++    E + YI        H  
Sbjct: 226 IFFFREGAAVFWNVKDKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSKLHRG 285

Query: 768 ESCFIMVPERDNS-LXRXAFXHAMAQSARLGAWEA 869
           E       + D++ L + AF +A+  S +L  WEA
Sbjct: 286 EIKLNSELDLDDAILEKFAFSNALCLSVKLAIWEA 320


>BC106065-1|AAI06066.1|  449|Homo sapiens required for meiotic
           nuclear division 1 homolog (S. cerevisiae) protein.
          Length = 449

 Score = 50.8 bits (116), Expect = 9e-06
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
 Frame = +3

Query: 588 IFFFKEGAVVFWNCXELEXXXXREFVKPYELESYPRXVIEKXREIMTYIYQPNSXXCHLQ 767
           IFFF+EGA VFWN  +       + ++ +E++ Y   ++    E + YI        H  
Sbjct: 226 IFFFREGAAVFWNVKDKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSKLHRG 285

Query: 768 ESCFIMVPERDNS-LXRXAFXHAMAQSARLGAWEA 869
           E       + D++ L + AF +A+  S +L  WEA
Sbjct: 286 EIKLNSELDLDDAILEKFAFSNALCLSVKLAIWEA 320


>AL590543-1|CAI10940.1|  449|Homo sapiens required for meiotic
           nuclear division 1 homolog (S. cerevisiae) protein.
          Length = 449

 Score = 50.8 bits (116), Expect = 9e-06
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
 Frame = +3

Query: 588 IFFFKEGAVVFWNCXELEXXXXREFVKPYELESYPRXVIEKXREIMTYIYQPNSXXCHLQ 767
           IFFF+EGA VFWN  +       + ++ +E++ Y   ++    E + YI        H  
Sbjct: 226 IFFFREGAAVFWNVKDKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSKLHRG 285

Query: 768 ESCFIMVPERDNS-LXRXAFXHAMAQSARLGAWEA 869
           E       + D++ L + AF +A+  S +L  WEA
Sbjct: 286 EIKLNSELDLDDAILEKFAFSNALCLSVKLAIWEA 320


>AL590413-8|CAI13595.1|  211|Homo sapiens required for meiotic
           nuclear division 1 homolog (S. cerevisiae) protein.
          Length = 211

 Score = 50.8 bits (116), Expect = 9e-06
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
 Frame = +3

Query: 588 IFFFKEGAVVFWNCXELEXXXXREFVKPYELESYPRXVIEKXREIMTYIYQPNSXXCHLQ 767
           IFFF+EGA VFWN  +       + ++ +E++ Y   ++    E + YI        H  
Sbjct: 56  IFFFREGAAVFWNVKDKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSKLHRG 115

Query: 768 ESCFIMVPERDNS-LXRXAFXHAMAQSARLGAWEA 869
           E       + D++ L + AF +A+  S +L  WEA
Sbjct: 116 EIKLNSELDLDDAILEKFAFSNALCLSVKLAIWEA 150


>AL590413-7|CAI13594.1|  238|Homo sapiens required for meiotic
           nuclear division 1 homolog (S. cerevisiae) protein.
          Length = 238

 Score = 50.8 bits (116), Expect = 9e-06
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
 Frame = +3

Query: 588 IFFFKEGAVVFWNCXELEXXXXREFVKPYELESYPRXVIEKXREIMTYIYQPNSXXCHLQ 767
           IFFF+EGA VFWN  +       + ++ +E++ Y   ++    E + YI        H  
Sbjct: 15  IFFFREGAAVFWNVKDKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSKLHRG 74

Query: 768 ESCFIMVPERDNS-LXRXAFXHAMAQSARLGAWEA 869
           E       + D++ L + AF +A+  S +L  WEA
Sbjct: 75  EIKLNSELDLDDAILEKFAFSNALCLSVKLAIWEA 109


>AL590413-1|CAI13588.1|  449|Homo sapiens required for meiotic
           nuclear division 1 homolog (S. cerevisiae) protein.
          Length = 449

 Score = 50.8 bits (116), Expect = 9e-06
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
 Frame = +3

Query: 588 IFFFKEGAVVFWNCXELEXXXXREFVKPYELESYPRXVIEKXREIMTYIYQPNSXXCHLQ 767
           IFFF+EGA VFWN  +       + ++ +E++ Y   ++    E + YI        H  
Sbjct: 226 IFFFREGAAVFWNVKDKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSKLHRG 285

Query: 768 ESCFIMVPERDNS-LXRXAFXHAMAQSARLGAWEA 869
           E       + D++ L + AF +A+  S +L  WEA
Sbjct: 286 EIKLNSELDLDDAILEKFAFSNALCLSVKLAIWEA 320


>AK000634-1|BAA91299.1|  449|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20627 fis, clone KAT03923. ).
          Length = 449

 Score = 50.8 bits (116), Expect = 9e-06
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
 Frame = +3

Query: 588 IFFFKEGAVVFWNCXELEXXXXREFVKPYELESYPRXVIEKXREIMTYIYQPNSXXCHLQ 767
           IFFF+EGA VFWN  +       + ++ +E++ Y   ++    E + YI        H  
Sbjct: 226 IFFFREGAAVFWNVKDKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSKLHRG 285

Query: 768 ESCFIMVPERDNS-LXRXAFXHAMAQSARLGAWEA 869
           E       + D++ L + AF +A+  S +L  WEA
Sbjct: 286 EIKLNSELDLDDAILEKFAFSNALCLSVKLAIWEA 320


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,623,711
Number of Sequences: 237096
Number of extensions: 1532264
Number of successful extensions: 1671
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1671
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16458822770
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -