Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_P21
         (1176 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82083-8|CAB04968.2|  374|Caenorhabditis elegans Hypothetical pr...    40   0.003
AL021480-6|CAD90181.1|  374|Caenorhabditis elegans Hypothetical ...    40   0.003
Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical pr...    29   6.4  

>Z82083-8|CAB04968.2|  374|Caenorhabditis elegans Hypothetical
           protein ZK1010.2 protein.
          Length = 374

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
 Frame = +3

Query: 576 EQREIFFFKEGAVVFWNCXELEXXXXREFVKPYELESYPRXVIEKXREIMTYIYQPNSXX 755
           E  EIF F++G VVFWN    +       ++ Y    Y   ++   ++ M Y +   S  
Sbjct: 119 ELSEIFVFRDGVVVFWNVDSSQRSHILRELERYADAPYDSMIVMDEQDRMFYKFSEQSTG 178

Query: 756 CHLQESCFIMVPE--------RDNSLXRXAFXHAMAQSARLGAWEA 869
             +++  F +  +         +  L R A     A S ++G WE+
Sbjct: 179 STIRQDRFYLSGKHLDAFHGSNEAILERFALSQGFAASVKIGVWES 224


>AL021480-6|CAD90181.1|  374|Caenorhabditis elegans Hypothetical
           protein ZK1010.2 protein.
          Length = 374

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
 Frame = +3

Query: 576 EQREIFFFKEGAVVFWNCXELEXXXXREFVKPYELESYPRXVIEKXREIMTYIYQPNSXX 755
           E  EIF F++G VVFWN    +       ++ Y    Y   ++   ++ M Y +   S  
Sbjct: 119 ELSEIFVFRDGVVVFWNVDSSQRSHILRELERYADAPYDSMIVMDEQDRMFYKFSEQSTG 178

Query: 756 CHLQESCFIMVPE--------RDNSLXRXAFXHAMAQSARLGAWEA 869
             +++  F +  +         +  L R A     A S ++G WE+
Sbjct: 179 STIRQDRFYLSGKHLDAFHGSNEAILERFALSQGFAASVKIGVWES 224


>Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical
           protein C06H2.7 protein.
          Length = 325

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 87  YVTFKNNCINRHXYILKNVRNGTKCPYTYR 176
           Y+ F+N       ++  N+ NGTK   TYR
Sbjct: 86  YIQFRNQLKGPEVHVFLNIENGTKIVTTYR 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,914,870
Number of Sequences: 27780
Number of extensions: 246905
Number of successful extensions: 396
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3213813064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)