Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_P20
         (1161 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    45   5e-06
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   3.2  

>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 44.8 bits (101), Expect = 5e-06
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +3

Query: 240 YLELGCTPIPSVDNTTICPDAFKCPDL-HPDPTMCYYRGASYTDRSPL-PQNLIKNPCSQ 413
           Y ELGC PI  ++    CP  ++CP+L   D   CY+ G  Y   + L P     + CS 
Sbjct: 35  YAELGCKPI--LEEGQCCPKRYQCPELTDRDGNKCYFNGNIYPAGAKLAPTEQEIHSCSP 92

Query: 414 ACSC 425
           AC C
Sbjct: 93  ACFC 96



 Score = 24.2 bits (50), Expect = 7.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 756 CAPIFAGNGRSCPIGFECPSTTTK 827
           C PI    G+ CP  ++CP  T +
Sbjct: 40  CKPILE-EGQCCPKRYQCPELTDR 62


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 3.2
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -3

Query: 607  YVLPSTWQVFNAAIASLPQTFAVLQHESNSYVLTHSWRSESKDSTQSTAAQS 452
            Y+      VF+A IASL +  AVL  E    V+  +W    +   + +AA +
Sbjct: 1639 YIKNQVRDVFHAPIASLVKGAAVLTEEQFVEVIPIAWELLLETDQEVSAASA 1690


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,088,852
Number of Sequences: 2352
Number of extensions: 22636
Number of successful extensions: 49
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 130799040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)