Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_P20
(1161 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 38 0.014
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 38 0.014
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 33 0.38
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 33 0.38
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 32 0.67
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 32 0.67
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 31 2.1
AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical... 31 2.1
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 31 2.1
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 30 3.6
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 30 3.6
AC006684-1|AAF39967.1| 198|Caenorhabditis elegans Hypothetical ... 30 3.6
U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in bl... 29 6.3
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 29 6.3
AL033536-6|CAK55187.1| 162|Caenorhabditis elegans Hypothetical ... 29 6.3
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 29 6.3
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 29 6.3
U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical pr... 29 8.3
U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical pr... 29 8.3
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 29 8.3
AL021492-13|CAA16381.2| 201|Caenorhabditis elegans Hypothetical... 29 8.3
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 37.9 bits (84), Expect = 0.014
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 3/138 (2%)
Frame = +3
Query: 195 AVSSDMAGECNMSAFYLELGCTPIPSVDNTTICPDAFKCPDLHPDPTMCYYRGASYTDRS 374
+ S+ A +C+ F CT +D+ +C F C D + ++C+ S ++
Sbjct: 3178 SASAQKASKCSNGQFQ----CTSGECIDDAKVCDRNFDCTDRSDESSLCFIDECSLAEK- 3232
Query: 375 PLPQNLIKNPCSQACSCRISDGEPQFDCAAVDCVESFDSDLQECVKTYELDSCCSTANVC 554
PL C Q C D + + C DC E F D+ + + ++ C + C
Sbjct: 3233 PL--------CEQKC----MDMKIGYKC---DCFEGFAIDISDQKSCHNVNECYEGISGC 3277
Query: 555 GK---DAIAALKTCQVDG 599
+ D I + K VDG
Sbjct: 3278 SQKCDDKIGSYKCGCVDG 3295
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 37.9 bits (84), Expect = 0.014
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 3/138 (2%)
Frame = +3
Query: 195 AVSSDMAGECNMSAFYLELGCTPIPSVDNTTICPDAFKCPDLHPDPTMCYYRGASYTDRS 374
+ S+ A +C+ F CT +D+ +C F C D + ++C+ S ++
Sbjct: 3178 SASAQKASKCSNGQFQ----CTSGECIDDAKVCDRNFDCTDRSDESSLCFIDECSLAEK- 3232
Query: 375 PLPQNLIKNPCSQACSCRISDGEPQFDCAAVDCVESFDSDLQECVKTYELDSCCSTANVC 554
PL C Q C D + + C DC E F D+ + + ++ C + C
Sbjct: 3233 PL--------CEQKC----MDMKIGYKC---DCFEGFAIDISDQKSCHNVNECYEGISGC 3277
Query: 555 GK---DAIAALKTCQVDG 599
+ D I + K VDG
Sbjct: 3278 SQKCDDKIGSYKCGCVDG 3295
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical
protein R107.8 protein.
Length = 1429
Score = 33.1 bits (72), Expect = 0.38
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 369 RSPLPQNL-IKNPCSQACSCRISDGEPQFDCAAVDCVESFDSDLQECVKTYELDSCCSTA 545
+S L +NL + +PC +C D + C C + F+ D+ E K L++ CS
Sbjct: 499 KSSLSENLCLSDPCMNNATCIDVDAHIGYACI---CKQGFEGDICERHKDLCLENPCSNG 555
Query: 546 NVC 554
VC
Sbjct: 556 GVC 558
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein (
C.elegans homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 33.1 bits (72), Expect = 0.38
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 369 RSPLPQNL-IKNPCSQACSCRISDGEPQFDCAAVDCVESFDSDLQECVKTYELDSCCSTA 545
+S L +NL + +PC +C D + C C + F+ D+ E K L++ CS
Sbjct: 499 KSSLSENLCLSDPCMNNATCIDVDAHIGYACI---CKQGFEGDICERHKDLCLENPCSNG 555
Query: 546 NVC 554
VC
Sbjct: 556 GVC 558
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 32.3 bits (70), Expect = 0.67
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Frame = +3
Query: 501 ECVKTYELDSCCSTANVCGKDAIAALKTCQVDGKTYREGEIFEPQNTRKTCICTSDWSDS 680
ECV T + +CC + + + TC G + + ++P + R C +
Sbjct: 490 ECVYTGTMHACCPSRELTCNQGLQVGTTC---GLSTLQRWYYDPLHNR--CNQFEYQGCN 544
Query: 681 ADNSAYCRDIDCGLEIHYQDKIFDNCAPIFAGNGR--SCPIGFECPSTTT 824
+++ + +DC H D A I + NGR +C +CPST T
Sbjct: 545 GNDNNFVTRVDCIETCHRSDCPDGGDALIDSSNGRIIACERNDDCPSTHT 594
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 32.3 bits (70), Expect = 0.67
Identities = 34/109 (31%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Frame = +3
Query: 408 SQACSCRISDGEPQFDCAAVD-CVE-SFDSD-LQECVKTYELDSC--CST-ANVCGKDAI 569
S SCR + QF C+ D C+ S D + +C + +C C A+ CGK+ I
Sbjct: 207 SDEASCRSKCSKDQFKCSGSDACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCI 266
Query: 570 AALKTCQVDGKTYREGEIFEPQNTRKTCICTSDWSDSADNSAYCRDIDC 716
A K C DG + E Q KTC S A C D C
Sbjct: 267 KASKVC--DGIPDCDDGSDEHQCDCKTC--------SGSEKALCEDGTC 305
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 297 DAFKCPDLHPDPTMCYYRGASYTDRSPLPQNLIKNP 404
DAFK P+ HP+P + G S D+ P P + K P
Sbjct: 462 DAFKKPEPHPEPNV---SGGSEEDKIPEPVDAFKKP 494
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 297 DAFKCPDLHPDPTMCYYRGASYTDRSPLPQNLIKNP 404
DAFK P+ HP+P + G S D+ P P + K P
Sbjct: 462 DAFKKPEPHPEPNV---SGGSEEDKIPEPVDAFKKP 494
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 786 SCPIGFECPSTTTKVMRGLNLRSV 857
SC G +CP+ TT V +G +LRS+
Sbjct: 17 SCQSGCKCPTKTTAVCKGSSLRSI 40
>AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical
protein Y22D7AL.16 protein.
Length = 233
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
Frame = -1
Query: 741 CPG-NVFLSRNRC----LCNKLSCPLSHSSRMYRC 652
CPG S N C CNK +CP HS+R C
Sbjct: 185 CPGAKCIYSHNMCRYEDTCNKSTCPFDHSNRPRTC 219
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 786 SCPIGFECPSTTTKVMRGLNLRSV 857
SC G +CP+ TT V +G +LRS+
Sbjct: 17 SCQSGCKCPTKTTAVCKGSSLRSI 40
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 693 AYCRDIDCGLEIHYQ--DKIFDNCAPIFAGNGRSCPIGFECPSTTTKVMR 836
A+C ++ E YQ ++I D+ +FAG + IG PSTT KV++
Sbjct: 138 AFCVEMSTAGEPAYQLVEQIRDSRVKVFAGTACAKDIGPREPSTTNKVLQ 187
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 478 SPSTPTSRSASKRTNWTHVAAQQMSAARTQSQR*KPAKWTAKRIGRGRFSSPRT 639
+P T T+R+ RT + A RT+ R +P K A R R + +P T
Sbjct: 545 APETVTTRTEPPRTEPPRTIPPRTEAPRTEPPRTEPPKTEAPRTVRPKTEAPMT 598
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 29.9 bits (64), Expect = 3.6
Identities = 46/211 (21%), Positives = 77/211 (36%), Gaps = 10/211 (4%)
Frame = +3
Query: 219 ECNMSAFYLELGCTPIPSVDNTTICPDAFKCPDLHPDPTMCYYR-GASYTDRSPLPQNLI 395
+C S +L C P +DN C ++ KC D + + C G S S L +
Sbjct: 1709 DCTSSG-WLGDHCEIQPKLDNCLYCQNSVKCFDTFTNYSRCQCAPGFSGDYCSDLIDDCF 1767
Query: 396 KNPCSQACSCRISDGEPQFDCAAVDCVESFDSDLQECVKTYELDS----CCSTANVCGKD 563
PC +C I + ++ +ES++ Q +S C+ C
Sbjct: 1768 FEPCFNGGTCSIFN----YNTTTKVSIESYNCTCQTGYFGTNCESRIHPSCTDLITCQNG 1823
Query: 564 AIAALKT-----CQVDGKTYREGEIFEPQNTRKTCICTSDWSDSADNSAYCRDIDCGLEI 728
L + CQ + Y I+ ++ + C+ +S S++ + +C D G
Sbjct: 1824 GTCQLTSFDTAVCQCTDQFY---GIYCEKSCSEQCVHSSGCKQSSNGTVFCECYD-GFTS 1879
Query: 729 HYQDKIFDNCAPIFAGNGRSCPIGFECPSTT 821
D++ D C N C C STT
Sbjct: 1880 TRCDEVCDVC----KANILLCQNSGTCNSTT 1906
>AC006684-1|AAF39967.1| 198|Caenorhabditis elegans Hypothetical
protein T02H6.9 protein.
Length = 198
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -3
Query: 508 THSWRSESKDSTQSTAAQSNCGSPSEMRQLHAWEHG 401
+ SWR +KD + + CG P R+ ++W G
Sbjct: 113 SESWRGGNKDDVAANNFAAYCGRPEAPRRRYSWIQG 148
>U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 10 protein.
Length = 375
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = +3
Query: 366 DRSPLPQNLIKNPCSQACSCRISDGEPQFDCAAVD---CVESFDSDLQECVKTYELDSCC 536
D +P+ QN AC C +P DCA V C + +C + + CC
Sbjct: 202 DCAPVQQNPCCQQAQPACDCAPVQQQPACDCAPVQQNPCCQQQAQSTCDCAPVQQ-NPCC 260
Query: 537 STA 545
A
Sbjct: 261 QQA 263
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 615 GEIFEPQNTRKTCICTSDWSDSADNSA-YCRDIDCGLEIHYQDKIF 749
G+ F QNTR+T +C+ +++ A C EIH ++IF
Sbjct: 990 GKAFSSQNTRRTHVCSRLFAEIKGRGATLCGQCPSCPEIHQVERIF 1035
>AL033536-6|CAK55187.1| 162|Caenorhabditis elegans Hypothetical
protein Y53C10A.15 protein.
Length = 162
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 628 SKISPSLYVLPSTWQVFNAAIASLPQTFAVLQHESNSYVLTHSWRSESKDS 476
SKI P+L + PS + VFN L + +L+H + + +SKDS
Sbjct: 33 SKI-PNLLMEPSKYFVFNGPFDKLSMDYFILRHPEFQRIAYNVTLKQSKDS 82
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 615 GEIFEPQNTRKTCICTSDWSDSADNSA-YCRDIDCGLEIHYQDKIF 749
G+ F QNTR+T +C+ +++ A C EIH ++IF
Sbjct: 990 GKAFSSQNTRRTHVCSRLFAEIKGRGATLCGQCPSCPEIHQVERIF 1035
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = -1
Query: 744 FCPGNVFLSRNRCLCNKLSCPLSHSSRMYRCRSS-----LCSGARKSPPPYTFCRPLGRF 580
F ++ + R +CN C S+ + +C SS +CS RKS CR RF
Sbjct: 281 FTTFGLYHHQRRQMCNSTGCSYLSSTGIRQCNSSKCISCVCSNYRKSDG----CRSSSRF 336
Query: 579 LT 574
LT
Sbjct: 337 LT 338
>U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical
protein C14F11.4a protein.
Length = 345
Score = 28.7 bits (61), Expect = 8.3
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 807 IQIQLDNYVRSRRISERSYQIFCPGNVFLSRNRCLCNKLSCPLSHSSRMYRCRSSLCSGA 628
IQ+Q+D+ ++ S R P + SR K+S SS+ +++L
Sbjct: 210 IQLQVDHLMQLLTHSSR------PASAIGSRPGSAAEKMSSVSRSSSKSSNLKANLVMPT 263
Query: 627 RKSPPPYT 604
R+SPPP T
Sbjct: 264 RRSPPPKT 271
>U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical
protein C14F11.4b protein.
Length = 341
Score = 28.7 bits (61), Expect = 8.3
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 807 IQIQLDNYVRSRRISERSYQIFCPGNVFLSRNRCLCNKLSCPLSHSSRMYRCRSSLCSGA 628
IQ+Q+D+ ++ S R P + SR K+S SS+ +++L
Sbjct: 206 IQLQVDHLMQLLTHSSR------PASAIGSRPGSAAEKMSSVSRSSSKSSNLKANLVMPT 259
Query: 627 RKSPPPYT 604
R+SPPP T
Sbjct: 260 RRSPPPKT 267
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.7 bits (61), Expect = 8.3
Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 8/96 (8%)
Frame = +3
Query: 276 DNTTICP-----DAFKCPDLHPDPTMCYYRGASYT-DRSPLPQNLIKNPCSQACSCRISD 437
D TT C D P L D C S D + + +P Q C R +
Sbjct: 2054 DGTTACSKKSTADCISLPSLCADKAKCDNSTRSCECDAGYIGDGYVCSPHPQDCVLRDNL 2113
Query: 438 GEPQFDCA--AVDCVESFDSDLQECVKTYELDSCCS 539
P+ C C+ F D +CV +E S CS
Sbjct: 2114 CSPEAVCQNRRCQCLPGFTGDGVKCVSIHERASNCS 2149
>AL021492-13|CAA16381.2| 201|Caenorhabditis elegans Hypothetical
protein Y45F10D.6 protein.
Length = 201
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 579 KTCQVDGKTYREGEIFEPQNTRKTC 653
K C+ +G +Y+ GE F+ N R TC
Sbjct: 46 KVCKKNGHSYKVGEEFDVGNLRYTC 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,606,119
Number of Sequences: 27780
Number of extensions: 527520
Number of successful extensions: 1860
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1850
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3161640774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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