Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_P19
         (1184 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0078 + 17931998-17932062,17933320-17933416,17933506-179336...    30   4.1  
04_03_0550 + 17054155-17054182,17054438-17054503,17054504-17056959     29   5.4  
04_04_1441 - 33621423-33622118,33622251-33622315,33623140-336232...    29   7.1  
03_02_0917 + 12372122-12372422,12372487-12372524,12373103-123731...    29   7.1  
01_06_1259 - 35810926-35811777                                         29   7.1  
09_04_0600 + 18883094-18883393,18883606-18883755,18883851-188841...    29   9.4  
04_04_0923 + 29441740-29441980,29442321-29442401,29442630-294427...    29   9.4  

>01_05_0078 +
           17931998-17932062,17933320-17933416,17933506-17933601,
           17933957-17933988,17935143-17935595,17935831-17935975,
           17936058-17936159,17937798-17937890,17939448-17939489,
           17940092-17940202,17940446-17940517,17940596-17940714,
           17940981-17941044,17941133-17942782
          Length = 1046

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +2

Query: 80  ANXLHYKLFSELCLTTVQQLLKRKD-AVDQKPMEHNLSRKNLKNEVGLQLPPEQKI 244
           ++ L  K  +E     + Q  K K+ ++D+    HN SRK   ++V   LPPE+++
Sbjct: 657 SDSLPVKKQAETNYQQISQSGKEKEHSMDESNSTHNRSRKRTPDQVDGSLPPEKQV 712


>04_03_0550 + 17054155-17054182,17054438-17054503,17054504-17056959
          Length = 849

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 535 KVYFHSTHTELSQRTITLRFLDPQVFIGLQILHLLHP 425
           +VYF++   +L+  T+    L   VFIGL +L L  P
Sbjct: 14  RVYFYAFDIDLASSTLVTGMLSVHVFIGLLLLSLHAP 50


>04_04_1441 -
           33621423-33622118,33622251-33622315,33623140-33623227,
           33623957-33625570
          Length = 820

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 14/52 (26%), Positives = 32/52 (61%)
 Frame = +2

Query: 206 NEVGLQLPPEQKILLSLLMMNKHQ*LNEVEADQKVPRKKRESRARVKVEVVD 361
           +EV ++   ++K   + L+  + +   + + ++KV ++K+E + + KVEVVD
Sbjct: 321 DEVKVEKKKKKKAKKASLVEGETEGAKDSKQEKKVKKEKKEKKKKKKVEVVD 372


>03_02_0917 +
           12372122-12372422,12372487-12372524,12373103-12373186,
           12373796-12374504,12374641-12374729,12374834-12374903,
           12374977-12375060,12375097-12375239,12375337-12375418,
           12375605-12375687,12375769-12375835,12376287-12376376,
           12377631-12377737,12377862-12377969
          Length = 684

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 290 PRLATGACSSSEDLAESFVLVAAGGRPRFL 201
           P+    AC S ED   SF    +GGRP+F+
Sbjct: 66  PKSNQKACKSFEDFDISFKSTRSGGRPKFV 95


>01_06_1259 - 35810926-35811777
          Length = 283

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
 Frame = +1

Query: 124 DGSTVVEKKGRGR------PKANGTQPESKELKKRGRPPAATRTKDSAKSSD 261
           + S+   K+GR R      P+ + T P + + K+RGRPP       +A+S++
Sbjct: 189 NASSQPRKRGRPRKDATMYPRKDATIPANTQPKRRGRPPKNRNLSGNAQSAE 240


>09_04_0600 +
           18883094-18883393,18883606-18883755,18883851-18884142,
           18884697-18884858,18884958-18885021,18887573-18888080
          Length = 491

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 542 SLMVSKLKYLVNSHVSSNLLNYRDSTTFSIEIISPKYSC 658
           S M   L+  V  H S  +L Y D+TT+ + + +P  +C
Sbjct: 450 SRMRLALQLCVRRHTSWCMLLYSDTTTYGLNVTAPSGAC 488


>04_04_0923 +
           29441740-29441980,29442321-29442401,29442630-29442719,
           29443123-29443203,29443721-29443774,29444062-29444111,
           29444542-29444623,29444734-29444838,29445514-29445641,
           29445726-29445797,29445887-29445937,29446029-29446100,
           29446201-29446278,29446446-29447270,29447648-29448556
          Length = 972

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +1

Query: 121 DDGSTVVEKKGRGRP--KANGTQPESKELKKRGRPPAATRTKDSAKSSDD 264
           D GS   E  G+     K  GT+ +SKEL+K+    +   TKD +K + D
Sbjct: 33  DQGSEKKEMSGKNIKSIKETGTKGQSKELQKK-ESKSRKSTKDKSKKNKD 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,053,466
Number of Sequences: 37544
Number of extensions: 347631
Number of successful extensions: 922
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3608292120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)